PDB: 45953 resultsInfo pagesStatus searchChemie searchBIRD

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3ZWH	Ca2+-bound S100A4 C3S, C81S, C86S and F45W mutant complexed with myosin IIA Descriptor: ACETATE ION, AZIDE ION, CALCIUM ION, ... Authors: Kiss, B, Duelli, A, Radnai, L, Kekesi, A.K, Katona, G, Nyitray, L. Deposit date: 2011-07-31 Release date: 2012-04-04 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Crystal Structure of the S100A4-Nonmuscle Myosin Iia Tail Fragment Complex Reveals an Asymmetric Target Binding Mechanism. Proc.Natl.Acad.Sci.USA, 109, 2012
1UH6	Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06 Descriptor: ubiquitin-like 5 Authors: Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-06-25 Release date: 2003-12-25 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06 To be Published
1UHP	Solution structure of RSGI RUH-005, a PDZ domain in human cDNA, KIAA1095 Descriptor: hypothetical protein KIAA1095 Authors: Hamada, T, Muto, Y, Hirota, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-07-09 Release date: 2004-01-09 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure of RSGI RUH-005, a PDZ domain in human cDNA, KIAA1095 To be published
1UJD	Solution Structure of RSGI RUH-003, a PDZ domain of hypothetical KIAA0559 protein from human cDNA Descriptor: KIAA0559 protein Authors: Ohashi, W, Hirota, H, Yamazaki, T, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-07-31 Release date: 2004-01-31 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution Structure of RSGI RUH-003, a PDZ domain of hypothetical KIAA0559 protein from human cDNA To be published
1KXK	Crystal Structure of a RNA Molecule Containing Domain 5 and 6 of the Yeast ai5g Group II Self-splicing Intron Descriptor: MAGNESIUM ION, ai5g group II Self-splicing intron Authors: Zhang, L, Doudna, J.A. Deposit date: 2002-01-31 Release date: 2002-03-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural insights into group II intron catalysis and branch-site selection. Science, 295, 2002
1KH6	Crystal Structure of an RNA Tertiary Domain Essential to HCV IRES-mediated Translation Initiation. Descriptor: JIIIabc Authors: Kieft, J.S, Zhou, K, Grech, A, Jubin, R, Doudna, J.A. Deposit date: 2001-11-29 Release date: 2002-04-26 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Crystal structure of an RNA tertiary domain essential to HCV IRES-mediated translation initiation. Nat.Struct.Biol., 9, 2002
1V2Y	Solution Structure of Mouse Hypothetical Gene (RIKEN cDNA 3300001G02) Product Homologous to Ubiquitin Fold Descriptor: 3300001G02Rik protein Authors: Zhao, C, Kigawa, T, Tomizawa, T, Koshiba, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2003-10-17 Release date: 2004-04-17 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution Structure of Mouse Hypothetical Gene (RIKEN cDNA 3300001G02) Product Homologous to Ubiquitin Fold To be Published
4AL6	Crystal structure of the S148ACsy4-crRNA complex Descriptor: CRRNA, 5'-R(CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP* CP*AP*GP*C)-3', CSY4 ENDORIBONUCLEASE Authors: Haurwitz, R.E, Sternberg, S.H, Doudna, J.A. Deposit date: 2012-03-02 Release date: 2012-06-13 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.63 Å) Cite: Csy4 Relies on an Unusual Catalytic Dyad to Position and Cleave Crispr RNA. Embo J., 31, 2012
4AL5	Crystal structure of the Csy4-crRNA product complex Descriptor: 5'-R(*UP*UP*CP*AP*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP *GP*GP*CP*AP*GP*C)-3', CSY4 ENDORIBONUCLEASE, GLYCEROL Authors: Haurwitz, R.E, Sternberg, S.H, Doudna, J.A. Deposit date: 2012-03-02 Release date: 2012-06-13 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Csy4 Relies on an Unusual Catalytic Dyad to Position and Cleave Crispr RNA. Embo J., 31, 2012
4AL7	Crystal structure of the Csy4-minimal crRNA complex Descriptor: 5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*AP*G)-3', CSY4 ENDORIBONUCLEASE Authors: Haurwitz, R.E, Sternberg, S.H, Doudna, J.A. Deposit date: 2012-03-02 Release date: 2012-06-13 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.32 Å) Cite: Csy4 Relies on an Unusual Catalytic Dyad to Position and Cleave Crispr RNA. Embo J., 31, 2012
1VEH	Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA Descriptor: NifU-like protein HIRIP5 Authors: Ohashi, W, Hirota, H, Yamazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2004-03-31 Release date: 2004-09-30 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA To be published
1VEG	Solution Structure of RSGI RUH-012, a UBA Domain from Mouse cDNA Descriptor: NEDD8 ultimate buster-1 Authors: Abe, T, Hirota, H, Izumi, K, Yoshida, M, Yamazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2004-03-31 Release date: 2004-09-30 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution Structure of RSGI RUH-012, a UBA Domain from Mouse cDNA To be Published
1WIV	solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA Descriptor: ubiquitin-specific protease 14 Authors: Higuchi, Y, Abe, T, Hirota, H, Izumi, K, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2004-05-28 Release date: 2004-11-28 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA To be Published
1WJ7	Solution structure of RSGI RUH-015, a UBA domain from mouse cDNA Descriptor: Hypothetical protein (RSGI RUH-015) Authors: Hamada, T, Hirota, H, Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2004-05-29 Release date: 2005-09-27 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of RSGI RUH-015, a UBA domain from mouse cDNA To be Published
1WJ6	Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049 Descriptor: KIAA0049 protein Authors: Hamada, T, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2004-05-29 Release date: 2004-11-29 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049 To be Published
1VC5	Crystal Structure of the Wild Type Hepatitis Delta Virus Gemonic Ribozyme Precursor, in EDTA solution Descriptor: Hepatitis Delta virus ribozyme, SODIUM ION, U1 small nuclear ribonucleoprotein A Authors: Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A. Deposit date: 2004-03-04 Release date: 2004-05-18 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3.4 Å) Cite: A Conformational Switch controls hepatitis delta virus ribozyme catalysis NATURE, 429, 2004
1YXN	Pseudo-atomic model of a fiberless isometric variant of bacteriophage phi29 Descriptor: Major head protein Authors: Morais, M.C, Choi, K.H, Koti, J.S, Chipman, P.R, Anderson, D.L, Rossmann, M.G. Deposit date: 2005-02-22 Release date: 2005-04-26 Last modified: 2024-02-14 Method: ELECTRON MICROSCOPY (7.9 Å) Cite: Conservation of the Capsid Structure in Tailed dsDNA Bacteriophages: the Pseudoatomic Structure of phi29 Mol.Cell, 18, 2005
2AEX	The 1.58A Crystal Structure of Human Coproporphyrinogen Oxidase Reveals the Structural Basis of Hereditary Coproporphyria Descriptor: CITRIC ACID, Coproporphyrinogen III oxidase, mitochondrial Authors: Lee, D.S, Flachsova, E, Bodnarova, M, Demeler, B, Martasek, P, Raman, C.S. Deposit date: 2005-07-24 Release date: 2005-08-02 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.58 Å) Cite: Structural basis of hereditary coproporphyria. Proc.Natl.Acad.Sci.USA, 102, 2005
3UJ3	Crystal Structure of the synaptic tetramer of the G-Segment Invertase (Gin) Descriptor: DNA-invertase Authors: Ritacco, C.J, Wang, J, Kamtekar, S, Steitz, T.A. Deposit date: 2011-11-07 Release date: 2012-12-05 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.51 Å) Cite: Crystal structure of an intermediate of rotating dimers within the synaptic tetramer of the G-segment invertase. Nucleic Acids Res., 41, 2013
8JFQ	Structure of the Major G-Quadruplex in the Human EGFR Oncogene Promoter Adopts a Unique Folding Topology with a Distinctive Snap-back Loop Descriptor: 26mer-DNA Authors: Liu, Y, Li, J, Zhang, Y, Wang, Y, Chen, J, Bian, Y, Xia, Y, Yang, M.H, Zheng, K, Wang, K.B, Kong, L.Y. Deposit date: 2023-05-18 Release date: 2023-08-02 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure of the Major G-Quadruplex in the Human EGFR Oncogene Promoter Adopts a Unique Folding Topology with a Distinctive Snap-Back Loop. J.Am.Chem.Soc., 145, 2023
4V1N	Architecture of the RNA polymerase II-Mediator core transcription initiation complex Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... Authors: Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. Deposit date: 2014-09-29 Release date: 2015-02-04 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (7.8 Å) Cite: Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
7MLJ	Crystal structure of Thermus thermophilus reiterative transcription complex with 4nt oligo-G RNA Descriptor: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*GP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA (5'-D(P*CP*AP*TP*CP*CP*GP*TP*GP*CP*CP*CP*TP*GP*AP*G)-3'), DNA-directed RNA polymerase subunit alpha, ... Authors: Liu, Y, Ebright, R.H. Deposit date: 2021-04-28 Release date: 2022-02-02 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.75 Å) Cite: Structural and mechanistic basis of reiterative transcription initiation. Proc.Natl.Acad.Sci.USA, 119, 2022
5W5Y	RNA polymerase I Initial Transcribing Complex Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... Authors: Han, Y, He, Y. Deposit date: 2017-06-16 Release date: 2017-07-26 Last modified: 2019-11-27 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
5W66	RNA polymerase I Initial Transcribing Complex State 3 Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... Authors: Han, Y, He, Y. Deposit date: 2017-06-16 Release date: 2017-07-26 Last modified: 2019-11-27 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017
5W65	RNA polymerase I Initial Transcribing Complex State 2 Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... Authors: Han, Y, He, Y. Deposit date: 2017-06-16 Release date: 2017-08-02 Last modified: 2019-11-27 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Structural mechanism of ATP-independent transcription initiation by RNA polymerase I. Elife, 6, 2017

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