PDB: 1507 resultsInfo pagesStatus searchChemie searchBIRD

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2LXC	Solution structure of the complex between the Sgt2 homodimerization domain and the Get5 UBL domain Descriptor: Small glutamine-rich tetratricopeptide repeat-containing protein 2, Ubiquitin-like protein MDY2 Authors: Chartron, J.W, Vandervelde, D.G, Clemons Jr, W.M. Deposit date: 2012-08-19 Release date: 2012-11-21 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. Cell Rep, 2, 2012
4GOC	Crystal structure of the Get5 ubiquitin-like domain Descriptor: Golgi to ER traffic protein 5 Authors: Chartron, J.W, VanderVelde, D.G, Clemons Jr, W.M. Deposit date: 2012-08-19 Release date: 2012-11-21 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. Cell Rep, 2, 2012
4GIV	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ183 Descriptor: 3-(pyridin-3-yl)propyl (2S)-1-[(3-nitrophenyl)sulfonyl]piperidine-2-carboxylate, FORMIC ACID, Ubiquitin-like protein SMT3, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2012-08-09 Release date: 2012-09-05 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.45 Å) Cite: A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
4V8T	Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1 Descriptor: 25S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNA, 5S RIBOSOMAL RNA, ... Authors: Greber, B.J, Boehringer, D, Montellese, C, Ban, N. Deposit date: 2012-08-07 Release date: 2014-07-09 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (8.1 Å) Cite: Cryo-Em Structures of Arx1 and Maturation Factors Rei1 and Jjj1 Bound to the 60S Ribosomal Subunit Nat.Struct.Mol.Biol., 19, 2012
4GGQ	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with CJ40 Descriptor: 3-(3,4,5-trimethoxyphenyl)propyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2012-08-07 Release date: 2012-08-15 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.95 Å) Cite: A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
2LWP	The NMR solution structure of the the ubiquitin homology domain of mouse BAG-1 Descriptor: BAG family molecular chaperone regulator 1 Authors: Huang, H, Yu, C. Deposit date: 2012-08-05 Release date: 2013-06-19 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: The NMR solution structure of the ubiquitin homology domain of Bcl-2-associated athanogene 1 (BAG-1-UBH) from Mus musculus. Biochem.Biophys.Res.Commun., 431, 2013
4G50	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ168 Descriptor: 1,2-ETHANEDIOL, 3-(3,4,5-trimethoxyphenyl)propyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate, FORMIC ACID, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2012-07-17 Release date: 2012-08-01 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.75 Å) Cite: A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
2LVO	Structure of the gp78CUE domain bound to monubiquitin Descriptor: E3 ubiquitin-protein ligase AMFR, Ubiquitin Authors: Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. Deposit date: 2012-07-09 Release date: 2012-11-21 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
3VUY	Crystal structure of A20 ZF7 in complex with linear tetraubiquitin Descriptor: POTASSIUM ION, Polyubiquitin-C, Tumor necrosis factor alpha-induced protein 3, ... Authors: Nishimasu, H, Ishitani, R, Nureki, O. Deposit date: 2012-07-09 Release date: 2013-02-13 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.981 Å) Cite: Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation Embo J., 31, 2012
3VUX	Crystal structure of A20 ZF7 in complex with linear ubiquitin, form II Descriptor: 1,2-ETHANEDIOL, POTASSIUM ION, Polyubiquitin-C, ... Authors: Nishimasu, H, Ishitani, R, Nureki, O. Deposit date: 2012-07-09 Release date: 2013-02-13 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.699 Å) Cite: Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation Embo J., 31, 2012
3VUW	Crystal structure of A20 ZF7 in complex with linear ubiquitin, form I Descriptor: POTASSIUM ION, Polyubiquitin-C, Tumor necrosis factor alpha-induced protein 3, ... Authors: Nishimasu, H, Ishitani, R, Nureki, O. Deposit date: 2012-07-09 Release date: 2013-02-13 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Specific recognition of linear polyubiquitin by A20 zinc finger 7 is involved in NF-kappaB regulation Embo J., 31, 2012
2LVP	gp78CUE domain bound to the distal ubiquitin of K48-linked diubiquitin Descriptor: E3 ubiquitin-protein ligase AMFR, Ubiquitin Authors: Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. Deposit date: 2012-07-09 Release date: 2012-11-21 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
2LVQ	gp78CUE domain bound to the proximal ubiquitin of K48-linked diubiquitin Descriptor: E3 ubiquitin-protein ligase AMFR, Ubiquitin Authors: Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R. Deposit date: 2012-07-09 Release date: 2012-11-21 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains. Structure, 20, 2012
4FN2	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ37 Descriptor: Ubiquitin-like protein SMT3, Peptidyl-prolyl cis-trans isomerase, ethyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2012-06-19 Release date: 2012-08-01 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.95 Å) Cite: A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
2RSU	Alternative structure of Ubiquitin Descriptor: Ubiquitin Authors: Kitazawa, S, Kameda, T, Yagi-Utsumi, M, Kato, K, Kitahara, R. Deposit date: 2012-06-15 Release date: 2013-03-27 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin Biochemistry, 52, 2013
4FJV	Crystal Structure of Human Otubain2 and Ubiquitin Complex Descriptor: ETHANAMINE, GLYCEROL, Polyubiquitin-C, ... Authors: Altun, M, Walter, T.S, Kramer, H.B, Iphofer, A, David, Y, Komsany, A, Ternette, N, Nicholson, B, Navon, A, Stuart, D.I, Ren, J, Kessler, B.M. Deposit date: 2012-06-12 Release date: 2013-06-12 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.047 Å) Cite: The human otubain2-ubiquitin structure provides insights into the cleavage specificity of poly-ubiquitin-linkages. Plos One, 10, 2015
4AWJ	pVHL:EloB:EloC complex, in complex with capped Hydroxyproline Descriptor: (4R)-1-acetyl-4-hydroxy-N-methyl-L-prolinamide, ACETATE ION, ACETIC ACID, ... Authors: Van Molle, I, Thomann, A, Buckley, D.L, So, E.C, Lang, S, Crews, C.M, Ciulli, A. Deposit date: 2012-06-04 Release date: 2012-11-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Dissecting Fragment-Based Lead Discovery at the Von Hippel-Lindau Protein:Hypoxia Inducible Factor 1Alpha Protein-Protein Interface. Chem.Biol., 19, 2012
4FBJ	Structure of the Cif:Nedd8 complex - Photorhabdus luminescens Cycle Inhibiting Factor in complex with human Nedd8 Descriptor: CHLORIDE ION, Hypothetical protein, NEDD8 Authors: Crow, A, Banfield, M.J. Deposit date: 2012-05-23 Release date: 2012-06-20 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.6 Å) Cite: The molecular basis of Nedd8 deamidation by the bacterial effector protein Cif Proc.Natl.Acad.Sci.USA, 2012
4AUQ	Structure of BIRC7-UbcH5b-Ub complex. Descriptor: BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 7, POLYUBIQUITIN-C, UBIQUITIN-CONJUGATING ENZYME E2 D2, ... Authors: Dou, H, Buetow, L, Sibbet, G.J, Cameron, K, Huang, D.T. Deposit date: 2012-05-21 Release date: 2012-08-15 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.176 Å) Cite: Birc7-E2 Ubiquitin Conjugate Structure Reveals the Mechanism of Ubiquitin Transfer by a Ring Dimer. Nat.Struct.Mol.Biol., 19, 2012
4F8C	Structure of the Cif:Nedd8 complex - Yersinia pseudotuberculosis Cycle Inhibiting Factor in complex with human Nedd8 Descriptor: 1,2-ETHANEDIOL, Cycle Inhibiting Factor, NEDD8 Authors: Crow, A, Banfield, M. Deposit date: 2012-05-17 Release date: 2012-06-20 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.95 Å) Cite: The molecular basis of Nedd8 deamidation by the bacterial effector protein Cif Proc.Natl.Acad.Sci.USA, 2012
4ASW	Structure of the complex between the N-terminal dimerisation domain of Sgt2 and the UBL domain of Get5 Descriptor: SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, UBIQUITIN-LIKE PROTEIN MDY2 Authors: Simon, A.C, Simpson, P.J, Goldstone, R.M, Krysztofinska, E.M, Murray, J.W, High, S, Isaacson, R.L. Deposit date: 2012-05-03 Release date: 2013-01-16 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure of the Sgt2/Get5 Complex Provides Insights Into Get-Mediated Targeting of Tail-Anchored Membrane Proteins Proc.Natl.Acad.Sci.USA, 110, 2013
2LRW	Solution structure of a ubiquitin-like protein from Trypanosoma brucei Descriptor: Ubiquitin, putative Authors: Wang, R, Wang, T, Liao, S, Zhang, J, Tu, X. Deposit date: 2012-04-13 Release date: 2013-04-24 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure of a ubiqutin-like protein from Trypanosoma bucei To be Published
4AP4	Rnf4 - ubch5a - ubiquitin heterotrimeric complex Descriptor: E3 UBIQUITIN LIGASE RNF4, UBIQUITIN C, UBIQUITIN-CONJUGATING ENZYME E2 D1, ... Authors: Plechanovova, A, Hay, R.T, Tatham, M.H, Jaffray, E, Naismith, J.H. Deposit date: 2012-03-30 Release date: 2012-07-25 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.21 Å) Cite: Structure of a Ring E3 Ligase and Ubiquitin-Loaded E2 Primed for Catalysis Nature, 489, 2012
4EEW	Crystal structure of the Ubl domain of BAG6 Descriptor: Large proline-rich protein BAG6 Authors: Kozlov, G, LePage, K, Vinaik, R, Gehring, K. Deposit date: 2012-03-28 Release date: 2012-04-11 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Crystal structure of the Ubl domain of BAG6 To be Published
4DWF	Crystal structure of a HLA-B associated transcript 3 (BAT3) from Homo sapiens at 1.80 A resolution Descriptor: HLA-B-associated transcript 3, SULFATE ION Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL) Deposit date: 2012-02-24 Release date: 2012-03-28 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of a HLA-B associated transcript 3 (BAT3) from Homo sapiens at 1.80 A resolution To be published

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