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6W0V
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BU of 6w0v by Molmil
The Crystal Structure of the Mutant Nuclease Domain of Pyocin S8 with its Cognate Immunity Protein
Descriptor: Bacteriocin immunity protein, Pyocin S8
Authors:Turano, H, Gomes, F, Domingos, R.M, Netto, L.E.S.
Deposit date:2020-03-03
Release date:2020-09-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.381 Å)
Cite:Molecular Structure and Functional Analysis of Pyocin S8 from Pseudomonas aeruginosa Reveals the Essential Requirement of a Glutamate Residue in the H-N-H Motif for DNase Activity.
J.Bacteriol., 202, 2020
4M4N
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BU of 4m4n by Molmil
Structural evaluation the Y358H mutant of the aspergillus fumigatus kdnase (sialidase)
Descriptor: Extracellular sialidase/neuraminidase, putative, GLYCEROL, ...
Authors:Telford, J.C, Taylor, G.L.
Deposit date:2013-08-07
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Active site mutants of a fungal KDNase
To be Published
1FR2
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BU of 1fr2 by Molmil
CRYSTAL STRUCTURE OF THE E9 DNASE DOMAIN WITH A MUTANT IMMUNITY PROTEIN IM9(E41A)
Descriptor: COLICIN E9, COLICIN E9 IMMUNITY PROTEIN, PHOSPHATE ION, ...
Authors:Kuhlmann, U.C, Pommer, A.J, Moore, G.M, James, R, Kleanthous, C, Hemmings, A.M.
Deposit date:2000-09-07
Release date:2003-06-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:CRYSTAL STRUCTURE OF THE E9 DNASE DOMAIN WITH A MUTANT IMMUNITY PROTEIN IM9(E41A)
To be Published
4DFH
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BU of 4dfh by Molmil
Crystal structure of cell adhesion molecule nectin-2/CD112 variable domain
Descriptor: Poliovirus receptor-related protein 2
Authors:Liu, J, Qian, X, Chen, Z, Xu, X, Gao, F, Zhang, S, Zhang, R, Qi, J, Gao, G.F, Yan, J.
Deposit date:2012-01-23
Release date:2012-06-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of Cell Adhesion Molecule Nectin-2/CD112 and Its Binding to Immune Receptor DNAM-1/CD226
J.Immunol., 188, 2012
4M4V
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BU of 4m4v by Molmil
Structural evaluation R171L mutant of the aspergillus fumigatus kdnase (sialidase)
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, Extracellular sialidase/neuraminidase, putative, ...
Authors:Telford, J.C, Taylor, G.L.
Deposit date:2013-08-07
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Active site mutants of a fungal KDNase
To be Published
7ATY
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BU of 7aty by Molmil
Solution NMR structure of the SH3 domain of human Caskin1
Descriptor: Caskin-1
Authors:Toke, O, Koprivanacz, K, Radnai, L, Mero, B, Juhasz, T, Liliom, K, Buday, L.
Deposit date:2020-11-01
Release date:2021-02-03
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution NMR Structure of the SH3 Domain of Human Caskin1 Validates the Lack of a Typical Peptide Binding Groove and Supports a Role in Lipid Mediator Binding.
Cells, 10, 2021
2EJ7
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BU of 2ej7 by Molmil
Solution structure of the DnaJ domain of the human protein HCG3, a hypothetical protein tmp_locus_21
Descriptor: HCG3 gene
Authors:Ohinishi, S, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-15
Release date:2007-09-18
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the DnaJ domain of the human protein HCG3, a hypothetical protein tmp_locus_21
To be Published
4M4U
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BU of 4m4u by Molmil
Structural evaluation D84A mutant of the aspergillus fumigatus kdnase (sialidase)
Descriptor: CHLORIDE ION, Extracellular sialidase/neuraminidase, putative, ...
Authors:Telford, J.C, Taylor, G.L.
Deposit date:2013-08-07
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Active site mutants of a fungal KDNase
To be Published
1GXH
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BU of 1gxh by Molmil
Colicin E8 DNAse immunity protein: Im8
Descriptor: COLICIN E8 IMMUNITY PROTEIN
Authors:Leduff, C.S, Videler, H, Boetzel, R, Czisch, M, James, R, Kleanthous, C, Moore, G.R.
Deposit date:2002-04-05
Release date:2002-05-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Non-Cognate Protein-Protein Interaction: The NMR Structure of the Colicin E8 Inhibitor Protein Im8 and its Interaction with the DNase Domain of Colicin E9
To be Published
8C0O
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BU of 8c0o by Molmil
African cichlid nackednavirus capsid at pH 5.5
Descriptor: C protein
Authors:Pfister, S, Rabl, J, Boehringer, D, Meier, B.H.
Deposit date:2022-12-19
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural conservation of HBV-like capsid proteins over hundreds of millions of years despite the shift from non-enveloped to enveloped life-style.
Nat Commun, 14, 2023
6ISB
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BU of 6isb by Molmil
crystal structure of human CD226
Descriptor: CD226 antigen
Authors:Wang, H, Qi, J, Zhang, S, Li, Y, Tan, S, Gao, G.F.
Deposit date:2018-11-16
Release date:2018-12-26
Last modified:2019-02-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Binding mode of the side-by-side two-IgV molecule CD226/DNAM-1 to its ligand CD155/Necl-5.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
7AJR
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BU of 7ajr by Molmil
Virtual screening approach leading to the identification of a novel and tractable series of Pseudomonas aeruginosa elastase inhibitors
Descriptor: 2-[2-(1,3-benzothiazol-2-ylmethylcarbamoyl)-1,3-dihydroinden-2-yl]ethanoic acid, Keratinase KP2, SULFATE ION, ...
Authors:Leiris, S, Davies, D.T, Sprinsky, N, Castandet, J, Behria, L, Bodnarchuk, M.S, Sutton, J.M, Mullins, T.M.G, Jones, M.W, Forrest, A.K, Pallin, T.D, Karunakar, P, Martha, S.K, Parusharamulu, B, Ramula, R, Kotha, V, Pottabathini, N, Pothukanuri, S, Lemonnier, M, Everett, M.
Deposit date:2020-09-29
Release date:2021-02-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Virtual Screening Approach to Identifying a Novel and Tractable Series of Pseudomonas aeruginosa Elastase Inhibitors.
Acs Med.Chem.Lett., 12, 2021
8A06
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BU of 8a06 by Molmil
Flavobacterium infecting lipid-containing phage FLiP penton protein
Descriptor: Penton protein P12
Authors:Rissanen, I, Huiskonen, J.T.
Deposit date:2022-05-26
Release date:2022-12-14
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structure of ssDNA bacteriophage Phi CjT23 provides insight into early virus evolution.
Nat Commun, 13, 2022
4WYQ
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BU of 4wyq by Molmil
Crystal structure of the Dicer-TRBP interface
Descriptor: Endoribonuclease Dicer, Poly(UNK), RISC-loading complex subunit TARBP2
Authors:Wilson, R.C, Doudna, J.A.
Deposit date:2014-11-18
Release date:2014-12-17
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Dicer-TRBP Complex Formation Ensures Accurate Mammalian MicroRNA Biogenesis.
Mol.Cell, 57, 2015
8AAC
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BU of 8aac by Molmil
African cichlid nackednavirus capsid at pH 7.5
Descriptor: C protein
Authors:Pfister, S, Rabl, J, Boehringer, D, Meier, B.H.
Deposit date:2022-07-01
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural conservation of HBV-like capsid proteins over hundreds of millions of years despite the shift from non-enveloped to enveloped life-style.
Nat Commun, 14, 2023
6X2D
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BU of 6x2d by Molmil
Crystal Structure of DNase I Domain of Ribonuclease E from Vibrio cholerae
Descriptor: IODIDE ION, Ribonuclease E
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Wiersum, G, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-05-20
Release date:2020-06-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of DNase I Domain of Ribonuclease E from Vibrio cholerae.
To Be Published
1BXI
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BU of 1bxi by Molmil
CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI COLICIN E9 DNASE DOMAIN WITH ITS COGNATE IMMUNITY PROTEIN IM9
Descriptor: NICKEL (II) ION, PHOSPHATE ION, PROTEIN (COLICIN E9 IMMUNITY PROTEIN), ...
Authors:Kuhlmann, U.C, Kleanthous, C, James, R, Moore, G.R, Hemmings, A.M.
Deposit date:1998-10-04
Release date:1999-10-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of the E.Coli Colicin E9 DNase Domain With its Cognate Immunity Protein Im9
Thesis, 1998
4DFI
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BU of 4dfi by Molmil
Crystal structure of cell adhesion molecule nectin-2/CD112 mutant FAMP
Descriptor: Poliovirus receptor-related protein 2
Authors:Liu, J, Qian, X, Chen, Z, Xu, X, Gao, F, Zhang, S, Zhang, R, Qi, J, Gao, G.F, Yan, J.
Deposit date:2012-01-23
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Cell Adhesion Molecule Nectin-2/CD112 and Its Binding to Immune Receptor DNAM-1/CD226
J.Immunol., 188, 2012
1GXG
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BU of 1gxg by Molmil
Non-cognate protein-protein interactions: the NMR structure of the colicin E8 inhibitor protein Im8 and its interaction with the DNase domain of colicin E9
Descriptor: COLICIN E8 IMMUNITY PROTEIN
Authors:Le Duff, C.S, Videler, H, Boetzel, R, Czisch, M, James, R, Kleanthous, C, Moore, G.R.
Deposit date:2002-04-04
Release date:2002-05-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Non-Cognate Protein-Protein Interaction: The NMR Structure of the Colicin E8 Inhibitor Protein Im8 and its Interaction with the DNase Domain of Colicin E9
To be Published
2YUA
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BU of 2yua by Molmil
Solution structure of the DnaJ domain from human Williams-Beuren syndrome chromosome region 18 protein
Descriptor: Williams-Beuren syndrome chromosome region 18 protein
Authors:Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the DnaJ domain from human Williams-Beuren syndrome chromosome region 18 protein
To be Published
6ISA
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BU of 6isa by Molmil
mCD226
Descriptor: CD226 antigen
Authors:Wang, H, Qi, J, Zhang, S, Li, Y, Tan, S, Gao, G.F.
Deposit date:2018-11-16
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding mode of the side-by-side two-IgV molecule CD226/DNAM-1 to its ligand CD155/Necl-5.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5K4C
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BU of 5k4c by Molmil
Structure of eukaryotic translation initiation factor 3 subunit D (eIF3d) cap binding domain from Nasonia vitripennis, Crystal form 2
Descriptor: Eukaryotic translation initiation factor 3 subunit D, GLYCEROL
Authors:Kranzusch, P.J, Lee, A.S.Y, Doudna, J.A, Cate, J.H.D.
Deposit date:2016-05-20
Release date:2016-07-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:eIF3d is an mRNA cap-binding protein that is required for specialized translation initiation.
Nature, 536, 2016
2ZFU
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BU of 2zfu by Molmil
Structure of the methyltransferase-like domain of nucleomethylin
Descriptor: Cerebral protein 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Minami, H, Hashimoto, H, Murayama, A, Yanagisawa, J, Sato, M, Shimizu, T.
Deposit date:2008-01-14
Release date:2008-12-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Epigenetic control of rDNA loci in response to intracellular energy status
Cell(Cambridge,Mass.), 133, 2008
5WLH
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BU of 5wlh by Molmil
Crystal structure of LbaCas13a H328A (C2c2) bound to pre-crRNA (24-nt spacer)
Descriptor: GLYCEROL, IODIDE ION, LbaCas13a H328A (C2c2), ...
Authors:Knott, G.J, Doudna, J.A.
Deposit date:2017-07-26
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.80001032 Å)
Cite:Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme.
Nat. Struct. Mol. Biol., 24, 2017
5K4B
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BU of 5k4b by Molmil
Structure of eukaryotic translation initiation factor 3 subunit D (eIF3d) cap binding domain from Nasonia vitripennis, Crystal form 1
Descriptor: CHLORIDE ION, Eukaryotic translation initiation factor 3 subunit D
Authors:Kranzusch, P.J, Lee, A.S.Y, Doudna, J.A, Cate, J.H.D.
Deposit date:2016-05-20
Release date:2016-07-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:eIF3d is an mRNA cap-binding protein that is required for specialized translation initiation.
Nature, 536, 2016

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數據於2024-09-04公開中

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