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5AXE	Crystal Structure Analysis of DNA Duplexes containing sulfoamide-bridged nucleic acid (SuNA-NH) Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(LSH)P*AP*CP*GP*C)-3') Authors: Mitsuoka, Y, Aoyama, H, Kugimiya, A, Fujimura, Y, Yamamoto, T, Waki, R, Wada, F, Tahara, S, Sawamura, M, Noda, M, Hari, Y, Obika, S. Deposit date: 2015-07-28 Release date: 2016-07-20 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (0.95 Å) Cite: Effect of an N-substituent in sulfonamide-bridged nucleic acid (SuNA) on hybridization ability and duplex structure. Org.Biomol.Chem., 14, 2016
5AXF	Crystal Structure Analysis of DNA Duplexes containing sulfoamide-bridged nucleic acid (SuNA-NMe) Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(LSM)P*AP*CP*GP*C)-3') Authors: Mitsuoka, Y, Aoyama, H, Kugimiya, A, Fujimura, Y, Yamamoto, T, Waki, R, Wada, F, Tahara, S, Sawamura, M, Noda, M, Hari, Y, Obika, S. Deposit date: 2015-07-28 Release date: 2016-07-20 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.13 Å) Cite: Effect of an N-substituent in sulfonamide-bridged nucleic acid (SuNA) on hybridization ability and duplex structure. Org.Biomol.Chem., 14, 2016
2R9A	Crystal structure of human XLF Descriptor: Non-homologous end-joining factor 1 Authors: Andres, S.N, Junop, M.S. Deposit date: 2007-09-12 Release date: 2008-01-01 Last modified: 2017-10-25 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal Structure of Human XLF: A Twist in Nonhomologous DNA End-Joining Mol.Cell, 28
8DYK	Room temperature neutron structure of a fluorescent Ag8 cluster templated by a multistranded DNA scaffold Descriptor: DNA (5'-D(*AP*AP*CP*CP*CP*C)-3'), SILVER ION Authors: Meilleur, F, Lieberman, R.L, Petty, J.T. Deposit date: 2022-08-04 Release date: 2023-08-02 Last modified: 2024-05-22 Method: NEUTRON DIFFRACTION (2.1 Å) Cite: Mapping H + in the Nanoscale (A 2 C 4 ) 2 -Ag 8 Fluorophore. J Phys Chem Lett, 13, 2022
1Y9X	Solution structure of Archaeon DNA-binding protein ssh10b Descriptor: DNA/RNA-binding protein Alba 1 Authors: Cui, Q, Tong, Y, Wang, J. Deposit date: 2004-12-16 Release date: 2005-06-21 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: A stabilizing alpha/beta-hydrophobic core greatly contributes to hyperthermostability of archaeal [P62A]Ssh10b. Biochemistry, 47, 2008
6IP3	Structure of human telomeric DNA at 1.4 Angstroms resolution Descriptor: DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), POTASSIUM ION Authors: Saikrishnan, K, Nuthanakanti, A, Srivatsan, S.G, Ahmad, I. Deposit date: 2018-11-01 Release date: 2019-05-15 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Probing G-quadruplex topologies and recognition concurrently in real time and 3D using a dual-app nucleoside probe. Nucleic Acids Res., 47, 2019
6ISW	Structure of human telomeric DNA with 5-selenophene-modified deoxyuridine at residue 12 Descriptor: DNA (22-MER), POTASSIUM ION Authors: Saikrishnan, K, Nuthanakanti, A, Srivatsan, S.G, Ahmad, I. Deposit date: 2018-11-19 Release date: 2019-05-15 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Probing G-quadruplex topologies and recognition concurrently in real time and 3D using a dual-app nucleoside probe. Nucleic Acids Res., 47, 2019
6IP7	Structure of human telomeric DNA with 5-Selenophene-modified deoxyuridine at residue 11 Descriptor: DNA (22-MER), POTASSIUM ION Authors: Saikrishnan, K, Nuthanakanti, A, Srivatsan, S.G, Ahmad, I. Deposit date: 2018-11-02 Release date: 2019-05-15 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Probing G-quadruplex topologies and recognition concurrently in real time and 3D using a dual-app nucleoside probe. Nucleic Acids Res., 47, 2019
3RWR	Crystal structure of the human XRCC4-XLF complex Descriptor: DNA repair protein XRCC4, HEXATANTALUM DODECABROMIDE, Non-homologous end-joining factor 1 Authors: Andres, S.N, Junop, M.S. Deposit date: 2011-05-09 Release date: 2011-12-07 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.943 Å) Cite: Structure of human XLF-XRCC4: assembly of a functional DNA repair complex To be Published
6J7Y	Human mitochondrial Oligoribonuclease in complex with DNA Descriptor: DNA (5'-D(P*TP*T)-3'), MAGNESIUM ION, Oligoribonuclease, ... Authors: Chu, L.Y, Agrawal, S, Yuan, H.S. Deposit date: 2019-01-18 Release date: 2019-08-28 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.203 Å) Cite: Structural insights into nanoRNA degradation by human Rexo2. Rna, 25, 2019
1ME0	Chimeric hairpin with 2',5'-linked RNA loop and DNA stem Descriptor: DNA/RNA (5'-D(*GP*GP*AP*C)-R(P*(U25)P*(U25)P*(C25)P*(5GP))-D(P*GP*TP*CP*C)-3') Authors: Denisov, A.Y, Hannoush, R.N, Gehring, K, Damha, M.J. Deposit date: 2002-08-07 Release date: 2003-08-19 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: A Novel RNA Motif Based on the Structure of Unusually Stable 2',5'-Linked r(UUCG) Loops J.AM.CHEM.SOC., 125, 2003
3Q5C	Crystal structure of four-way junction with sticky end Descriptor: DNA (5'-D(*CP*GP*GP*CP*GP*GP*CP*CP*GP*C)-3') Authors: Venkadesh, S, Mandal, P.K, Gautham, N. Deposit date: 2010-12-28 Release date: 2011-05-18 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.501 Å) Cite: The sequence d(CGGCGGCCGC) self-assembles into a two dimensional rhombic DNA lattice Biochem.Biophys.Res.Commun., 407, 2011
1UQD	SELF-COMPLEMENTARY DNA 5'-D(CGATCG)2, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*GP*AP*TP*CP*G)-3') Authors: Lam, S.L, Au-Yeung, S.C.F. Deposit date: 1996-06-26 Release date: 1997-01-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Sequence-specific local structural variations in solution structures of d(CGXX'CG)2 and d(CAXX'TG)2 self-complementary deoxyribonucleic acids. J.Mol.Biol., 266, 1997
1UQC	SELF-COMPLEMENTARY DNA 5'-D(CACGTG)2, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*AP*CP*GP*TP*G)-3') Authors: Lam, S.L, Au-Yeung, S.C.F. Deposit date: 1996-06-26 Release date: 1997-01-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Sequence-specific local structural variations in solution structures of d(CGXX'CG)2 and d(CAXX'TG)2 self-complementary deoxyribonucleic acids. J.Mol.Biol., 266, 1997
3Q61	3'-Fluoro Hexitol Nucleic Acid DNA Structure Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*(F3H)P*AP*CP*GP*C)-3') Authors: Seth, P.R, Allerson, C.R, Prakash, T.P, Siwkowski, A, Berdeja, A, Yu, J, Pallan, P.S, Watt, A.T, Gaus, H, Bhat, B, Egli, M, Swayze, E.E. Deposit date: 2010-12-30 Release date: 2012-01-18 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.56 Å) Cite: Synthesis, improved antisense activity and structural rationale for the divergent RNA affinities of 3'-fluoro hexitol nucleic acid (FHNA and Ara-FHNA) modified oligonucleotides. J.Am.Chem.Soc., 133, 2011
1UQE	SELF-COMPLEMENTARY DNA 5'-D(CGTACG)2, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*GP*TP*AP*CP*G)-3') Authors: Lam, S.L, Au-Yeung, S.C.F. Deposit date: 1996-06-26 Release date: 1997-01-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Sequence-specific local structural variations in solution structures of d(CGXX'CG)2 and d(CAXX'TG)2 self-complementary deoxyribonucleic acids. J.Mol.Biol., 266, 1997
1UQG	SELF-COMPLEMENTARY DNA 5'-D(CGCGCG)2, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3') Authors: Lam, S.L, Au-Yeung, S.C.F. Deposit date: 1996-06-26 Release date: 1997-01-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Sequence-specific local structural variations in solution structures of d(CGXX'CG)2 and d(CAXX'TG)2 self-complementary deoxyribonucleic acids. J.Mol.Biol., 266, 1997
1UQF	SELF-COMPLEMENTARY DNA 5'-D(CGGCCG)2, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*GP*GP*CP*CP*G)-3') Authors: Lam, S.L, Au-Yeung, S.C.F. Deposit date: 1996-06-26 Release date: 1997-01-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Sequence-specific local structural variations in solution structures of d(CGXX'CG)2 and d(CAXX'TG)2 self-complementary deoxyribonucleic acids. J.Mol.Biol., 266, 1997
1UQB	SELF-COMPLEMENTARY DNA 5'-D(CAGCTG)2, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*AP*GP*CP*TP*G)-3') Authors: Lam, S.L, Au-Yeung, S.C.F. Deposit date: 1996-06-26 Release date: 1997-01-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Sequence-specific local structural variations in solution structures of d(CGXX'CG)2 and d(CAXX'TG)2 self-complementary deoxyribonucleic acids. J.Mol.Biol., 266, 1997
1UQA	SELF-COMPLEMENTARY DNA 5'-D(CATATG)2, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: DNA (5'-D(*CP*AP*TP*AP*TP*G)-3') Authors: Lam, S.L, Au-Yeung, S.C.F. Deposit date: 1996-06-26 Release date: 1997-01-27 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Sequence-specific local structural variations in solution structures of d(CGXX'CG)2 and d(CAXX'TG)2 self-complementary deoxyribonucleic acids. J.Mol.Biol., 266, 1997
3VAX	Crystal structure of DndA from streptomyces lividans Descriptor: PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein dndA Authors: Zhang, Z, Chen, F, Lin, K, Wu, G. Deposit date: 2011-12-30 Release date: 2013-01-02 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal structure of the cysteine desulfurase DndA from Streptomyces lividans which is involved in DNA phosphorothioation Plos One, 7, 2012
1L7B	Solution NMR Structure of BRCT Domain of T. Thermophilus: Northeast Structural Genomics Consortium Target WR64TT Descriptor: DNA LIGASE Authors: Sahota, G, Dixon, B.L, Huang, Y.P, Aramini, J, Monleon, D, Bhattacharya, D, Swapna, G.V.T, Yin, C, Xiao, R, Anderson, S, Tejero, R, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) Deposit date: 2002-03-14 Release date: 2003-09-16 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution NMR Structure of the Brct Domain from Thermus Thermophilus DNA Ligase To be Published
1WP9	Crystal structure of Pyrococcus furiosus Hef helicase domain Descriptor: ATP-dependent RNA helicase, putative, PHOSPHATE ION Authors: Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K. Deposit date: 2004-08-31 Release date: 2005-02-01 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Crystal Structure and Functional Implications of Pyrococcus furiosus Hef Helicase Domain Involved in Branched DNA Processing Structure, 13, 2005
2QVW	Structure of Giardia Dicer refined against twinned data Descriptor: GLP_546_48378_50642, MANGANESE (II) ION Authors: Doudna, J.A, MacRae, I.J. Deposit date: 2007-08-09 Release date: 2007-09-25 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3 Å) Cite: An unusual case of pseudo-merohedral twinning in orthorhombic crystals of Dicer Acta Crystallogr.,Sect.D, 63, 2007
2FFL	Crystal Structure of Dicer from Giardia intestinalis Descriptor: Dicer, MANGANESE (II) ION Authors: Doudna, J.A, MacRae, I.J, Adams, P.D. Deposit date: 2005-12-19 Release date: 2006-01-24 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3.33 Å) Cite: Structural Basis of Double-Stranded RNA Processing by Dicer Science, 311, 2006

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