Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7MGJ
DownloadVisualize
BU of 7mgj by Molmil
TNNI3K complexed with N-methyl-4-(4-(3-(3-(trifluoromethyl) phenyl) ureido) phenoxy)picolinamide
Descriptor: N-methyl-4-[4-({[3-(trifluoromethyl)phenyl]carbamoyl}amino)phenoxy]pyridine-2-carboxamide, Serine/threonine-protein kinase TNNI3K
Authors:Shewchuk, L.M.
Deposit date:2021-04-12
Release date:2021-11-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Identification of Diarylurea Inhibitors of the Cardiac-Specific Kinase TNNI3K by Designing Selectivity Against VEGFR2, p38 alpha , and B-Raf.
J.Med.Chem., 64, 2021
7MGK
DownloadVisualize
BU of 7mgk by Molmil
TNNI3K complexed with 1-(3,5-dichloro-4-((6-(methylamino)pyrimidin-4-yl)oxy)phenyl)-3-(3-(trifluoromethyl)phenyl)urea
Descriptor: N-(3,5-dichloro-4-{[6-(methylamino)pyrimidin-4-yl]oxy}phenyl)-N'-[3-(trifluoromethyl)phenyl]urea, Serine/threonine-protein kinase TNNI3K
Authors:Shewchuk, L.M.
Deposit date:2021-04-12
Release date:2021-11-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Identification of Diarylurea Inhibitors of the Cardiac-Specific Kinase TNNI3K by Designing Selectivity Against VEGFR2, p38 alpha , and B-Raf.
J.Med.Chem., 64, 2021
5WZX
DownloadVisualize
BU of 5wzx by Molmil
Structural basis for a pentacyclic oleanane-type triterpenoid as a ligand of FXR
Descriptor: (4aR,6aR,6aS,6bS,8aS,9R,12aR,14bR)-2,2,6a,6b,9,12a-hexamethyl-10-oxidanylidene-1,3,4,5,6,6a,7,8,8a,9,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid, (R,R)-2,3-BUTANEDIOL, Bile acid receptor, ...
Authors:Lu, Y, Li, Y.
Deposit date:2017-01-19
Release date:2018-01-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Identification of an Oleanane-Type Triterpene Hedragonic Acid as a Novel Farnesoid X Receptor Ligand with Liver Protective Effects and Anti-inflammatory Activity
Mol. Pharmacol., 93, 2018
6J4S
DownloadVisualize
BU of 6j4s by Molmil
Structural basis of tubulin detyrosination by vasohibins-SVBP enzyme complex and functional implications
Descriptor: GLYCEROL, PHOSPHATE ION, Small vasohibin-binding protein, ...
Authors:Wang, N, Bao, H, Huang, H.
Deposit date:2019-01-10
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of tubulin detyrosination by the vasohibin-SVBP enzyme complex.
Nat.Struct.Mol.Biol., 26, 2019
2NWG
DownloadVisualize
BU of 2nwg by Molmil
Structure of CXCL12:heparin disaccharide complex
Descriptor: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, Stromal cell-derived factor 1
Authors:Murphy, J.W, Cho, Y, Lolis, E.
Deposit date:2006-11-14
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural and Functional Basis of CXCL12 (Stromal Cell-derived Factor-1{alpha}) Binding to Heparin
J.Biol.Chem., 282, 2007
4BC2
DownloadVisualize
BU of 4bc2 by Molmil
Crystal structure of human D-xylulokinase in complex with D-xylulose and adenosine diphosphate
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, D-XYLULOSE, ...
Authors:Bunker, R.D, Loomes, K.M, Baker, E.N.
Deposit date:2012-10-01
Release date:2012-11-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure and Function of Human Xylulokinase, an Enzyme with Important Roles in Carbohydrate Metabolism
J.Biol.Chem., 288, 2013
6JPP
DownloadVisualize
BU of 6jpp by Molmil
Solution structure of ELMO1 RBD
Descriptor: Engulfment and cell motility protein 1
Authors:Tsuda, K, Kukimoto-Niino, M, Shirouzu, M.
Deposit date:2019-03-27
Release date:2020-04-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Targeting Ras-binding domain of ELMO1 by computational nanobody design.
Commun Biol, 6, 2023
4BC3
DownloadVisualize
BU of 4bc3 by Molmil
Crystal structure of human D-xylulokinase
Descriptor: 1,2-ETHANEDIOL, XYLULOSE KINASE
Authors:Bunker, R.D, Loomes, K.M, Baker, E.N.
Deposit date:2012-10-01
Release date:2012-11-28
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structure and Function of Human Xylulokinase, an Enzyme with Important Roles in Carbohydrate Metabolism
J.Biol.Chem., 288, 2013
4BG8
DownloadVisualize
BU of 4bg8 by Molmil
Apo form of a putative sugar kinase MK0840 from Methanopyrus kandleri (monoclinic space group)
Descriptor: ACETATE ION, CHLORIDE ION, POTASSIUM ION, ...
Authors:Schacherl, M, Waltersperger, S.M, Baumann, U.
Deposit date:2013-03-24
Release date:2013-11-27
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
4BGA
DownloadVisualize
BU of 4bga by Molmil
Nucleotide-bound open form of a putative sugar kinase MK0840 from Methanopyrus kandleri
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Schacherl, M, Baumann, U.
Deposit date:2013-03-24
Release date:2013-11-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase Mk0840 from Methanopyrus Kandleri
Acta Crystallogr.,Sect.D, 69, 2013
2OMJ
DownloadVisualize
BU of 2omj by Molmil
solution structure of LARG PDZ domain
Descriptor: Rho guanine nucleotide exchange factor 12
Authors:Liu, J, Huang, H, Hu, Q.
Deposit date:2007-01-22
Release date:2008-01-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:solution structure and dynamics of the LARG PDZ domain
To be Published
6MDP
DownloadVisualize
BU of 6mdp by Molmil
The D1 and D2 domain rings of NSF engaging the SNAP-25 N-terminus within the 20S supercomplex (focused refinement on D1/D2 rings, class 2)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Synaptosomal-associated protein 25, ...
Authors:White, K.I, Zhao, M, Brunger, A.T.
Deposit date:2018-09-04
Release date:2018-09-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural principles of SNARE complex recognition by the AAA+ protein NSF.
Elife, 7, 2018
2W41
DownloadVisualize
BU of 2w41 by Molmil
Crystal structure of Plasmodium falciparum glycerol kinase with ADP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL KINASE, ...
Authors:Schnick, C, Polley, S.D, Fivelman, Q.L, Ranford-Cartwright, L, Wilkinson, S.R, Brannigan, J.A, Wilkinson, A.J, Baker, D.A.
Deposit date:2008-11-18
Release date:2008-12-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structure and Non-Essential Function of Glycerol Kinase in Plasmodium Falciparum Blood Stages.
Mol.Microbiol., 71, 2009
5TAR
DownloadVisualize
BU of 5tar by Molmil
Crystal structure of farnesylated and methylated kras4b in complex with PDE-delta (crystal form II - with ordered hypervariable region)
Descriptor: 1,2-ETHANEDIOL, FARNESYL, GTPase KRas, ...
Authors:Dharmaiah, S, Tran, T.H, Simanshu, D.K.
Deposit date:2016-09-10
Release date:2016-11-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of recognition of farnesylated and methylated KRAS4b by PDE delta.
Proc.Natl.Acad.Sci.USA, 113, 2016
2QUT
DownloadVisualize
BU of 2qut by Molmil
Dihydroxyacetone phosphate enamine intermediate in fructose-1,6-bisphosphate aldolase from rabbit muscle
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, Fructose-bisphosphate aldolase A
Authors:St-Jean, M, Sygusch, J.
Deposit date:2007-08-06
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Stereospecific proton transfer by a mobile catalyst in mammalian fructose-1,6-bisphosphate aldolase
J.Biol.Chem., 282, 2007
2R0D
DownloadVisualize
BU of 2r0d by Molmil
Crystal Structure of Autoinhibited Form of Grp1 Arf GTPase Exchange Factor
Descriptor: Cytohesin-3, DI(HYDROXYETHYL)ETHER, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, ...
Authors:DiNitto, J.P, Delprato, A, Gabe Lee, M.T, Cronin, T.C, Huang, S, Guilherme, A, Czech, M.P, Lambright, D.G.
Deposit date:2007-08-18
Release date:2007-12-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis and Mechanism of Autoregulation in 3-Phosphoinositide-Dependent Grp1 Family Arf GTPase Exchange Factors.
Mol.Cell, 28, 2007
4CFR
DownloadVisualize
BU of 4cfr by Molmil
Ca-bound S100A4 C3S, C81S, C86S and F45W mutant complexed with non- muscle myosin IIA
Descriptor: CALCIUM ION, MYOSIN-9, PROTEIN S100-A4
Authors:Duelli, A, Kiss, B, Lundholm, I, Bodor, A, Radnai, L, Petoukhov, M, Svergun, D, Nyitray, L, Katona, G.
Deposit date:2013-11-19
Release date:2014-05-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The C-Terminal Random Coil Region Tunes the Ca2+-Binding Affinity of S100A4 Through Conformational Activation.
Plos One, 9, 2014
2RAP
DownloadVisualize
BU of 2rap by Molmil
THE SMALL G PROTEIN RAP2A IN COMPLEX WITH GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RAP2A
Authors:Cherfils, J, Menetrey, J, Lebras, G.
Deposit date:1998-05-06
Release date:1998-06-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of the small G protein Rap2A in complex with its substrate GTP, with GDP and with GTPgammaS.
EMBO J., 16, 1997
5XJS
DownloadVisualize
BU of 5xjs by Molmil
Crystal Structure of the Gemin2-binding domain of SMN, Gemin2dN39 in Complex with SmD1(1-82)/D2/F/E from Human
Descriptor: Gem-associated protein 2, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ...
Authors:Yi, H, Zhang, R.
Deposit date:2017-05-04
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Negative cooperativity between Gemin2 and RNA provides insights into RNA selection and the SMN complex's release in snRNP assembly.
Nucleic Acids Res., 2019
4CID
DownloadVisualize
BU of 4cid by Molmil
Structural insights into the N-terminus of the EHD2 ATPase
Descriptor: CALCIUM ION, EH DOMAIN-CONTAINING PROTEIN 2, MAGNESIUM ION, ...
Authors:Shah, C, Daumke, O.
Deposit date:2013-12-06
Release date:2014-02-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights Into Membrane Interaction and Caveolar Targeting of Dynamin-Like Ehd2.
Structure, 22, 2014
2R2O
DownloadVisualize
BU of 2r2o by Molmil
Crystal structure of the effector domain of human Plexin B1
Descriptor: Plexin-B1, UNKNOWN ATOM OR ION
Authors:Tong, Y, Tempel, W, Shen, L, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-08-27
Release date:2007-09-04
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of Rac1, Rnd1, and RhoD to a novel Rho GTPase interaction motif destabilizes dimerization of the plexin-B1 effector domain.
J.Biol.Chem., 282, 2007
6MBX
DownloadVisualize
BU of 6mbx by Molmil
CRYSTAL STRUCTURE OF MUSKMELON ALLERGEN CUC M 2
Descriptor: Profilin
Authors:Kapingidza, A.B, Hyduke, N.P, Chruszcz, M.
Deposit date:2018-08-30
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Comparative structural and thermal stability studies of Cuc m 2.0101, Art v 4.0101 and other allergenic profilins.
Mol.Immunol., 114, 2019
6MDN
DownloadVisualize
BU of 6mdn by Molmil
The 20S supercomplex engaging the SNAP-25 N-terminus (class 2)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Alpha-soluble NSF attachment protein, ...
Authors:White, K.I, Zhao, M, Brunger, A.T.
Deposit date:2018-09-04
Release date:2018-09-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural principles of SNARE complex recognition by the AAA+ protein NSF.
Elife, 7, 2018
6LAB
DownloadVisualize
BU of 6lab by Molmil
169 bp nucleosome, harboring cohesive DNA termini, assembled with linker histone H1.0
Descriptor: CALCIUM ION, CHLORIDE ION, DNA (169-MER), ...
Authors:Adhireksan, Z, Sharma, D, Bao, Q, Lee, P.L, Padavattan, S, Davey, C.A.
Deposit date:2019-11-12
Release date:2021-02-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021
6LA2
DownloadVisualize
BU of 6la2 by Molmil
343 bp di-nucleosome harboring cohesive DNA termini assembled with linker histone H1.0
Descriptor: DNA (343-MER), Histone H1.0, Histone H2A type 1-B/E, ...
Authors:Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
Deposit date:2019-11-11
Release date:2021-02-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.89 Å)
Cite:Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021

223532

數據於2024-08-07公開中

PDB statisticsPDBj update infoContact PDBjnumon