Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8UFP
DownloadVisualize
BU of 8ufp by Molmil
Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 4-methyl-7-(4-methyl-2,3,4,5-tetrahydrobenzo[f][1,4]oxazepin-7-yl)quinolin-2-amine dihydrochloride
Descriptor: (7M)-4-methyl-7-(4-methyl-2,3,4,5-tetrahydro-1,4-benzoxazepin-7-yl)quinolin-2-amine, GLYCEROL, Nitric oxide synthase, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2023-10-04
Release date:2024-03-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic and Computational Insights into Isoform-Selective Dynamics in Nitric Oxide Synthase.
Biochemistry, 63, 2024
8UW4
DownloadVisualize
BU of 8uw4 by Molmil
Crystal structure of hydroxyisourate hydrolase from Herbaspirillum seropedicae
Descriptor: 5-hydroxyisourate hydrolase
Authors:Magalhaes, M.T.Q, Pereira, H.M, Bleicher, L.
Deposit date:2023-11-06
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of hydroxyisourate hydrolase from Herbaspirillum seropedicae
To Be Published
8YHF
DownloadVisualize
BU of 8yhf by Molmil
The Crystal Structure of the Type I TGF beta receptor from Biortus.
Descriptor: 2-fluoranyl-~{N}-[[5-(6-methylpyridin-2-yl)-4-([1,2,4]triazolo[1,5-a]pyridin-6-yl)-1~{H}-imidazol-2-yl]methyl]aniline, TGF-beta receptor type-1
Authors:Wang, F, Cheng, W, Lv, Z, Meng, Q, Xu, Y.
Deposit date:2024-02-28
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Crystal Structure of the Type I TGF beta receptor from Biortus.
To Be Published
8XOX
DownloadVisualize
BU of 8xox by Molmil
The Crystal Structure of FAK2 from Biortus.
Descriptor: 1,2-ETHANEDIOL, N-methyl-N-{3-[({2-[(2-oxo-2,3-dihydro-1H-indol-5-yl)amino]-5-(trifluoromethyl)pyrimidin-4-yl}amino)methyl]pyridin-2-yl}methanesulfonamide, Protein-tyrosine kinase 2-beta
Authors:Wang, F, Cheng, W, Lv, Z, Ju, C, Wang, J.
Deposit date:2024-01-02
Release date:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Crystal Structure of FAK2 from Biortus.
To Be Published
8UKU
DownloadVisualize
BU of 8uku by Molmil
RNA polymerase II elongation complex with Fapy-dG lesion with CMP added
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Hou, P, Oh, J, Wang, D.
Deposit date:2023-10-15
Release date:2024-04-24
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Molecular Mechanism of RNA Polymerase II Transcriptional Mutagenesis by the Epimerizable DNA Lesion, Fapy·dG.
J.Am.Chem.Soc., 146, 2024
8WPT
DownloadVisualize
BU of 8wpt by Molmil
Truncated mutant (1-171) of ferritin from Ureaplasma diversum
Descriptor: CHLORIDE ION, FE (III) ION, Truncated ferritin
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-10-10
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8WWV
DownloadVisualize
BU of 8wwv by Molmil
1-naphthylamine GS in complex with ADP and MetSox-P
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
Authors:Zhang, S.T, Zhou, N.Y.
Deposit date:2023-10-26
Release date:2024-01-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of the 1-naphthylamine biodegradation pathway reveals a glutamine synthetase-like protein that catalyzes 1-naphthylamine glutamylation
To Be Published
8YHI
DownloadVisualize
BU of 8yhi by Molmil
The Crystal Structure of SHP1 from Biortus.
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 6
Authors:Wang, F, Cheng, W, Yuan, Z, Qi, J, Shen, Z.
Deposit date:2024-02-28
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Crystal Structure of SHP1 from Biortus.
To Be Published
9F4K
DownloadVisualize
BU of 9f4k by Molmil
UP1 in complex with ZINC72259689
Descriptor: Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed, ~{N}-(cyclobutylmethyl)-1,3-dimethyl-pyrazole-4-carboxamide
Authors:Dunnett, L, Prischi, F.
Deposit date:2024-04-28
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published
9ASV
DownloadVisualize
BU of 9asv by Molmil
Crystal structure of SARS-CoV-2 3CL protease in complex with a benzyl 2-pyrrolidone inhibitor
Descriptor: (1R,2S)-2-{[N-({[(2S)-1-benzyl-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-{[N-({[(2S)-1-benzyl-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5, ...
Authors:Lovell, S, Cooper, A, Battaile, K.P, Dampalla, C.S, Groutas, W.C.
Deposit date:2024-02-26
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-Guided Design of Potent Coronavirus Inhibitors with a 2-Pyrrolidone Scaffold: Biochemical, Crystallographic, and Virological Studies.
J.Med.Chem., 2024
8TUQ
DownloadVisualize
BU of 8tuq by Molmil
STL Polyomavirus LTA NLS bound to importin alpha 2
Descriptor: Importin subunit alpha-1, Large T antigen
Authors:Donnelly, C.M, Cross, E.M, Forwood, J.K, Alvisi, G.
Deposit date:2023-08-17
Release date:2024-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:A functional and structural comparative analysis of large tumor antigens reveals evolution of different importin alpha-dependent nuclear localization signals.
Protein Sci., 33, 2024
8UAT
DownloadVisualize
BU of 8uat by Molmil
Thermus scotoductus SA-01 Ene-reductase Compound 3b Complex
Descriptor: 1-[2-(4-hydroxyphenyl)ethyl]-1,4-dihydropyridine-3-carboxamide, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Wilson, L.A, Guddat, L.W, Schenk, G, Scott, C.
Deposit date:2023-09-22
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structural Characterization of Enzymatic Interactions with Functional Nicotinamide Cofactor Biomimetics
Catalysts, 14, 2024
8VRG
DownloadVisualize
BU of 8vrg by Molmil
E. coli peptidyl-prolyl cis-trans isomerase containing delta1-monofluoro-leucines
Descriptor: Peptidyl-prolyl cis-trans isomerase B
Authors:Frkic, R.L, Jackson, C.J.
Deposit date:2024-01-22
Release date:2024-05-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Conformational Preferences of the Non-Canonical Amino Acids (2 S ,4 S )-5-Fluoroleucine, (2 S ,4 R )-5-Fluoroleucine, and 5,5'-Difluoroleucine in a Protein.
Biochemistry, 63, 2024
8UFR
DownloadVisualize
BU of 8ufr by Molmil
Structure of human endothelial nitric oxide synthase heme domain in complex with 4-methyl-7-(4-methyl-2,3,4,5-tetrahydrobenzo[f][1,4]oxazepin-7-yl)quinolin-2-amine dihydrochloride
Descriptor: (7M)-4-methyl-7-(4-methyl-2,3,4,5-tetrahydro-1,4-benzoxazepin-7-yl)quinolin-2-amine, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2023-10-04
Release date:2024-03-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.871 Å)
Cite:Crystallographic and Computational Insights into Isoform-Selective Dynamics in Nitric Oxide Synthase.
Biochemistry, 63, 2024
8ZMO
DownloadVisualize
BU of 8zmo by Molmil
Structure of a triple-helix region of human Collagen type XVII from Trautec
Descriptor: collagen type XVII
Authors:Chu, Y, Zhai, Y, Fan, X, Fu, S, Li, J, Wu, X, Cai, H, Wang, X, Li, D, Feng, P, Cao, K, Qian, S.
Deposit date:2024-05-23
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of a triple-helix region of human Collagen type XVII from Trautec
To Be Published
8UY1
DownloadVisualize
BU of 8uy1 by Molmil
Methylenetetrahydrofolate reductase from Chaetomium thermophilum DSM 1495, Active (R) State
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate reductase-like protein
Authors:Yamada, K, Mendoza, J, Koutmos, M.
Deposit date:2023-11-12
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structural basis of S-adenosylmethionine-dependent allosteric transition from active to inactive states in methylenetetrahydrofolate reductase.
Nat Commun, 15, 2024
9F4R
DownloadVisualize
BU of 9f4r by Molmil
UP1 in complex with Z802821712
Descriptor: Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed, N-ethyl-6-methylpyridazin-3-amine
Authors:Dunnett, L, Prischi, F.
Deposit date:2024-04-28
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published
9ATA
DownloadVisualize
BU of 9ata by Molmil
Crystal structure of MERS 3CL protease in complex with a phenylethyl 2-pyrrolidone inhibitor
Descriptor: (1R,2S)-1-hydroxy-2-{[N-({[(2S)-5-oxo-1-(2-phenylethyl)pyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-1-hydroxy-2-{[N-({[(2S)-5-oxo-1-(2-phenylethyl)pyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
Authors:Liu, L, Lovell, S, Battaile, K.P, Dampalla, C.S, Groutas, W.C.
Deposit date:2024-02-26
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure-Guided Design of Potent Coronavirus Inhibitors with a 2-Pyrrolidone Scaffold: Biochemical, Crystallographic, and Virological Studies.
J.Med.Chem., 2024
8V7R
DownloadVisualize
BU of 8v7r by Molmil
PanDDA analysis -- Crystal Structure of Zika virus NS3 Helicase in complex with Z56772132
Descriptor: (5R)-5-[2-(4-methoxyphenyl)ethyl]-5-methylimidazolidine-2,4-dione, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
Authors:Godoy, A.S, Noske, G.D, Fairhead, M, Lithgo, R.M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Marples, P.G, Ni, X, Tomlinson, C.W.E, Wild, C, Mesquita, N.C.M.R, Oliva, G, Fearon, D, Walsh, M.A, von Delft, F.
Deposit date:2023-12-04
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:PanDDA analysis -- Crystal Structure of Zika virus NS3 Helicase in complex with Z56772132
To Be Published
8TUS
DownloadVisualize
BU of 8tus by Molmil
WU Polyomavirus LTA NLS bound to importin alpha 2
Descriptor: Importin subunit alpha-1, Large T antigen
Authors:Donnelly, C.M, Cross, E.M, Forwood, J.K, Alvisi, G.
Deposit date:2023-08-17
Release date:2024-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A functional and structural comparative analysis of large tumor antigens reveals evolution of different importin alpha-dependent nuclear localization signals.
Protein Sci., 33, 2024
8V9A
DownloadVisualize
BU of 8v9a by Molmil
GII.NA1 Loreto 1257 norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, Capsid protein VP1
Authors:Kher, G, Kim, I, Pancera, M, Hansman, G.
Deposit date:2023-12-07
Release date:2024-06-19
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 2024
8WYG
DownloadVisualize
BU of 8wyg by Molmil
Crystal Structure of the second bromodomain of human BRD2 in complex with the inhibitor 22
Descriptor: 2-[[5-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-1-methyl-2-oxidanylidene-pyridin-4-yl]amino]-~{N}-(4-oxidanylcyclohexyl)ethanamide, Bromodomain-containing protein 2
Authors:Xu, H, Zhao, X, Shen, H, Xu, Y, Wu, X.
Deposit date:2023-10-30
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Discovery of Novel Phenoxyaryl Pyridones as Bromodomain and Extra-Terminal Domain (BET) Inhibitors with High Selectivity for the Second Bromodomain (BD2) to Potentially Treat Acute Myeloid Leukemia.
J.Med.Chem., 67, 2024
9ATE
DownloadVisualize
BU of 9ate by Molmil
Crystal structure of MERS 3CL protease in complex with a methylbicyclo[2.2.1]heptane 2-pyrrolidone inhibitor
Descriptor: (1R,2S)-2-{[N-({[(2S)-1-{[(1S,2S,4R)-bicyclo[2.2.1]heptan-2-yl]methyl}-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-{[N-({[(2S)-1-{[(1S,2S,4R)-bicyclo[2.2.1]heptan-2-yl]methyl}-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
Authors:Liu, L, Lovell, S, Battaile, K.P, Dampalla, C.S, Groutas, W.C.
Deposit date:2024-02-26
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-Guided Design of Potent Coronavirus Inhibitors with a 2-Pyrrolidone Scaffold: Biochemical, Crystallographic, and Virological Studies.
J.Med.Chem., 2024
8WBP
DownloadVisualize
BU of 8wbp by Molmil
Crystal structure of cis-Epoxysuccinate Hydrolases RhCESH[L] mutant E212Q
Descriptor: Epoxide hydrolase
Authors:Dong, S, Xuan, J.S, Feng, Y.G, Cui, Q.
Deposit date:2023-09-10
Release date:2024-01-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Deciphering the stereo-specific catalytic mechanisms of cis-epoxysuccinate hydrolases producing L(+)-tartaric acid.
J.Biol.Chem., 300, 2024
8WU7
DownloadVisualize
BU of 8wu7 by Molmil
Structure of a cis-Geranylfarnesyl Diphosphate Synthase from Streptomyces clavuligerus
Descriptor: Isoprenyl transferase
Authors:Li, F.R, Wang, Q.L, Pan, X.M, Dong, L.B.
Deposit date:2023-10-20
Release date:2024-05-08
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Discovery, Structure, and Engineering of a cis-Geranylfarnesyl Diphosphate Synthase.
Angew.Chem.Int.Ed.Engl., 63, 2024

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon