PDB: 52399 resultsInfo pagesStatus searchChemie searchBIRD

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1N73	Fibrin D-Dimer, Lamprey complexed with the PEPTIDE LIGAND: GLY-HIS-ARG-PRO-AMIDE Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Fibrin alpha-1 chain, ... Authors: Yang, Z, Pandi, L, Doolittle, R.F. Deposit date: 2002-11-12 Release date: 2003-01-07 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.9 Å) Cite: The Crystal structure of fragment double-D from cross-linked lamprey fibrin reveals isopeptide linkages across an unexpected D-D interface Biochemistry, 41, 2002
7KR9	Bifunctional enzyme GlmU bound to Zn(II) Descriptor: ACETYL COENZYME *A, Bifunctional protein GlmU, CALCIUM ION, ... Authors: Maher, M.J. Deposit date: 2020-11-19 Release date: 2021-12-01 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Dysregulation of Streptococcus pneumoniae zinc homeostasis breaks ampicillin resistance in a pneumonia infection model. Cell Rep, 38, 2022
6Z05	Campylobacter jejuni serine protease HtrA Descriptor: DegQ family serine endoprotease Authors: Grinzato, A, Kandiah, E, Zanotti, G. Deposit date: 2020-05-07 Release date: 2020-09-30 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (5.8 Å) Cite: Functional analysis and cryo-electron microscopy of Campylobacter jejuni serine protease HtrA. Gut Microbes, 12, 2020
7CAY	Crystal Structure of Lon N-terminal domain protein from Xanthomonas campestris Descriptor: ATP-dependent protease Authors: Singh, R, Sharma, B, Deshmukh, S, Kumar, A, Makde, R.D. Deposit date: 2020-06-10 Release date: 2020-10-14 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal structure of XCC3289 from Xanthomonas campestris: homology with the N-terminal substrate-binding domain of Lon peptidase. Acta Crystallogr.,Sect.F, 76, 2020
1A5I	CATALYTIC DOMAIN OF VAMPIRE BAT (DESMODUS ROTUNDUS) SALIVA PLASMINOGEN ACTIVATOR IN COMPLEX WITH EGR-CMK (GLU-GLY-ARG CHLOROMETHYL KETONE) Descriptor: L-alpha-glutamyl-N-{(1S)-4-{[amino(iminio)methyl]amino}-1-[(1S)-2-chloro-1-hydroxyethyl]butyl}glycinamide, PLASMINOGEN ACTIVATOR Authors: Renatus, M, Stubbs, M.T, Bode, W. Deposit date: 1998-02-17 Release date: 1999-03-23 Last modified: 2023-08-02 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Catalytic domain structure of vampire bat plasminogen activator: a molecular paradigm for proteolysis without activation cleavage. Biochemistry, 36, 1997
8OV5	PERIDININ-CHLOROPHYLL-PROTEIN OF AMPHIDINIUM CARTERAE, 100K Descriptor: CHLOROPHYLL A, PERIDININ, Peridinin-chlorophyll a-binding protein 1, ... Authors: Hofmann, E, Johanning, S. Deposit date: 2023-04-25 Release date: 2024-05-15 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Structural and Spectroscopic Characterization of the Peridinin-Chlorophyll a-Protein (PCP) Complex from Heterocapsa pygmaea (HPPCP) To Be Published
1SYI	X-RAY STRUCTURE OF THE Y702F MUTANT OF THE GLUR2 LIGAND-BINDING CORE (S1S2J) IN COMPLEX WITH (S)-CPW399 AT 2.1 A RESOLUTION. Descriptor: (S)-2-AMINO-3-(1,3,5,7-PENTAHYDRO-2,4-DIOXO-CYCLOPENTA[E]PYRIMIDIN-1-YL) PROIONIC ACID, Glutamate receptor 2 Authors: Frandsen, A, Pickering, D.S, Vestergaard, B, Kasper, C, Nielsen, B.B, Greenwood, J.R, Campiani, G, Gajhede, M, Schousboe, A, Kastrup, J.S. Deposit date: 2004-04-01 Release date: 2005-03-22 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Tyr702 Is an Important Determinant of Agonist Binding and Domain Closure of the Ligand-Binding Core of GluR2. Mol.Pharmacol., 67, 2005
1SYH	X-RAY STRUCTURE OF THE GLUR2 LIGAND-BINDING CORE (S1S2J) IN COMPLEX WITH (S)-CPW399 AT 1.85 A RESOLUTION. Descriptor: (S)-2-AMINO-3-(1,3,5,7-PENTAHYDRO-2,4-DIOXO-CYCLOPENTA[E]PYRIMIDIN-1-YL) PROIONIC ACID, Glutamate receptor 2 Authors: Frandsen, A, Pickering, D.S, Vestergaard, B, Kasper, C, Nielsen, B.B, Greenwood, J.R, Campiani, G, Gajhede, M, Schousboe, A, Kastrup, J.S. Deposit date: 2004-04-01 Release date: 2005-03-22 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Tyr702 Is an Important Determinant of Agonist Binding and Domain Closure of the Ligand-Binding Core of GluR2. Mol.Pharmacol., 67, 2005
3GQZ	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: (3S)-1-(4-acetylphenyl)-5-oxopyrrolidine-3-carboxylic acid, Beta-lactamase, DIMETHYL SULFOXIDE Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-24 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GKK	Insights into the Alkyl Peroxide Reduction Activity of Xanthomonas campestris Bacterioferritin Comigratory Protein from the Trapped Intermediate/Ligand Complex Structures Descriptor: Bacterioferritin comigratory protein, SULFATE ION Authors: Liao, S.-J. Deposit date: 2009-03-11 Release date: 2009-06-16 Last modified: 2017-11-01 Method: X-RAY DIFFRACTION (1.83 Å) Cite: Insights into the alkyl peroxide reduction pathway of Xanthomonas campestris bacterioferritin comigratory protein from the trapped intermediate-ligand complex structures J.Mol.Biol., 390, 2009
3GTC	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: (1R,2S)-2-(5-thioxo-4,5-dihydro-1H-1,2,4-triazol-3-yl)cyclohexanecarboxylic acid, Beta-lactamase, PHOSPHATE ION Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-27 Release date: 2009-04-14 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3FDS	Structural insight into recruitment of translesion DNA polymerase Dpo4 to sliding clamp PCNA Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA polymerase IV, ... Authors: Ling, H. Deposit date: 2008-11-26 Release date: 2009-01-20 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structural insight into recruitment of translesion DNA polymerase Dpo4 to sliding clamp PCNA Mol.Microbiol., 71, 2009
2SAS	STRUCTURE OF A SARCOPLASMIC CALCIUM-BINDING PROTEIN FROM AMPHIOXUS REFINED AT 2.4 ANGSTROMS RESOLUTION Descriptor: CALCIUM ION, SARCOPLASMIC CALCIUM-BINDING PROTEIN Authors: Cook, W.J, Babu, Y.S, Cox, J.A. Deposit date: 1993-07-30 Release date: 1993-10-31 Last modified: 2019-08-14 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structure of a sarcoplasmic calcium-binding protein from amphioxus refined at 2.4 A resolution. J.Mol.Biol., 229, 1993
3GRJ	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: 2-phenyl-1H-imidazole-4-carboxylic acid, Beta-lactamase, DI(HYDROXYETHYL)ETHER, ... Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-25 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.49 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GSG	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: (2S)-2-[(3aR,4R,7S,7aS)-1,3-dioxooctahydro-2H-4,7-methanoisoindol-2-yl]propanoic acid, Beta-lactamase, DIMETHYL SULFOXIDE, ... Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-26 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GR2	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: 4-ethyl-5-methyl-2-(1H-tetrazol-5-yl)-1,2-dihydro-3H-pyrazol-3-one, Beta-lactamase Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-24 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
1O8U	The 2 Angstrom Structure of 6-Oxo Camphor Hydrolase: New Structural Diversity in the Crotonase Superfamily Descriptor: 6-OXO CAMPHOR HYDROLASE, SODIUM ION Authors: Grogan, G, Whittingham, J.L, Turkenburg, J.P, Verma, C.S, Walsh, M.A. Deposit date: 2002-12-04 Release date: 2003-01-24 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2 Å) Cite: The 2 a Crystal Structure of 6-Oxo Camphor Hydrolase: New Structural Diversity in the Crotonase Superfamily J.Biol.Chem., 278, 2003
3GVB	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: (3S)-1-(2-hydroxyphenyl)-5-oxopyrrolidine-3-carboxylic acid, Beta-lactamase, DIMETHYL SULFOXIDE, ... Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-30 Release date: 2009-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GKN	Insights into the Alkyl Peroxide Reduction Activity of Xanthomonas campestris Bacterioferritin Comigratory Protein from the Trapped Intermediate/Ligand Complex Structures Descriptor: Bacterioferritin comigratory protein, GLYCEROL, NAPHTHALENE-2,6-DISULFONIC ACID, ... Authors: Liao, S.-J. Deposit date: 2009-03-11 Release date: 2009-06-16 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Insights into the alkyl peroxide reduction pathway of Xanthomonas campestris bacterioferritin comigratory protein from the trapped intermediate-ligand complex structures J.Mol.Biol., 390, 2009
3GV9	AmpC beta-lactamase in complex with Fragment-based Inhibitor Descriptor: 3-(acetylamino)thiophene-2-carboxylic acid, Beta-lactamase, DI(HYDROXYETHYL)ETHER, ... Authors: Teotico, D.T, Shoichet, B.K. Deposit date: 2009-03-30 Release date: 2009-04-14 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009
3GKM	Insights into the Alkyl Peroxide Reduction Activity of Xanthomonas campestris Bacterioferritin Comigratory Protein from the Trapped Intermediate/Ligand Complex Structures Descriptor: Bacterioferritin comigratory protein, FORMIC ACID Authors: Liao, S.-J. Deposit date: 2009-03-11 Release date: 2009-06-16 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Insights into the alkyl peroxide reduction pathway of Xanthomonas campestris bacterioferritin comigratory protein from the trapped intermediate-ligand complex structures J.Mol.Biol., 390, 2009
2L2R	Helical hairpin structure of a novel antimicrobial peptide EcAMP1 from seeds of barnyard grass (Echinochloa crus-galli) Descriptor: Antimicrobial peptide EcAMP1 Authors: Nolde, S.B, Barinov, N.A, Balashova, T.A, Arseniev, A.S, Vassilevski, A.A, Rogozhin, E.A, Egorov, T.A, Grishin, E.V. Deposit date: 2010-08-26 Release date: 2011-05-11 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Disulfide-stabilized Helical Hairpin Structure and Activity of a Novel Antifungal Peptide EcAMP1 from Seeds of Barnyard Grass (Echinochloa crus-galli). J.Biol.Chem., 286, 2011
2LHB	REFINEMENT OF A MOLECULAR MODEL FOR LAMPREY HEMOGLOBIN FROM PETROMYZON MARINUS Descriptor: CYANIDE ION, HEMOGLOBIN V (CYANO MET), PROTOPORPHYRIN IX CONTAINING FE Authors: Honzatko, R.B, Hendrickson, W.A, Love, W.E. Deposit date: 1985-08-16 Release date: 1986-01-21 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2 Å) Cite: Refinement of a molecular model for lamprey hemoglobin from Petromyzon marinus. J.Mol.Biol., 184, 1985
7MY9	Structure of proline utilization A with 1,3-dithiolane-2-carboxylate bound in the proline dehydrogenase active site Descriptor: 1,3-dithiolane-2-carboxylic acid, Bifunctional protein PutA, DI(HYDROXYETHYL)ETHER, ... Authors: Tanner, J.J, Campbell, A.C. Deposit date: 2021-05-20 Release date: 2021-09-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.628 Å) Cite: Photoinduced Covalent Irreversible Inactivation of Proline Dehydrogenase by S-Heterocycles. Acs Chem.Biol., 16, 2021
7MYA	Structure of proline utilization A with the FAD covalently-modified by 1,3-dithiolane Descriptor: Bifunctional protein PutA, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... Authors: Tanner, J.J, Campbell, A.C. Deposit date: 2021-05-20 Release date: 2021-09-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.56 Å) Cite: Photoinduced Covalent Irreversible Inactivation of Proline Dehydrogenase by S-Heterocycles. Acs Chem.Biol., 16, 2021

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