Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2HQZ
DownloadVisualize
BU of 2hqz by Molmil
Crystal structure of L42H design intermediate for GFP metal ion reporter
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-07-19
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
2DUH
DownloadVisualize
BU of 2duh by Molmil
crystal structure of a green fluorescent protein variant S65T/H148N at pH 9.5
Descriptor: Green fluorescent protein
Authors:Shu, X, Remington, S.J.
Deposit date:2006-07-23
Release date:2007-07-10
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies.
Biochemistry, 46, 2007
2QZ0
DownloadVisualize
BU of 2qz0 by Molmil
Mature Q183E variant of Green Fluorescent Protein Chromophore
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-08-15
Release date:2009-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the GFP Fluorophore Biosynthesis Pathway
To be Published
5LTR
DownloadVisualize
BU of 5ltr by Molmil
Structure of the Yellow-Green Fluorescent Protein mNeonGreen from Branchiostoma lanceolatum at the near physiological pH 8.0
Descriptor: CHLORIDE ION, mNeonGreen
Authors:Clavel, D, Gotthard, G, Royant, A.
Deposit date:2016-09-07
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Structural analysis of the bright monomeric yellow-green fluorescent protein mNeonGreen obtained by directed evolution.
Acta Crystallogr D Struct Biol, 72, 2016
7UGT
DownloadVisualize
BU of 7ugt by Molmil
Crystal structure of hyperfolder fluorescent protein FOLD6
Descriptor: FOLD6
Authors:Campbell, B.C, Liu, C.F, Petsko, G.A.
Deposit date:2022-03-25
Release date:2022-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Chemically stable fluorescent proteins for advanced microscopy.
Nat.Methods, 19, 2022
4GES
DownloadVisualize
BU of 4ges by Molmil
crystal structure of GFP-TYR151PYZ with an unnatural amino acid incorporation
Descriptor: Green fluorescent protein
Authors:Dong, J, Liu, X, Li, J, Wang, J, Gong, W.
Deposit date:2012-08-02
Release date:2012-08-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Genetic incorporation of a metal-chelating amino Acid as a probe for protein electron transfer.
Angew.Chem.Int.Ed.Engl., 51, 2012
4AR7
DownloadVisualize
BU of 4ar7 by Molmil
X-ray structure of the cyan fluorescent protein mTurquoise
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Noirclerc-Savoye, M, Goedhart, J, Gadella, T.W.J, Royant, A.
Deposit date:2012-04-21
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Structure of a Fluorescent Protein from Aequorea Victoria Bearing the Obligate-Monomer Mutation A206K.
Acta Crystallogr.,Sect.F, 68, 2012
3DQ7
DownloadVisualize
BU of 3dq7 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 1: Structure 17 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4JL5
DownloadVisualize
BU of 4jl5 by Molmil
A high resolution structure of Aquifex Adenylate kinase with 2 ADP's
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
2DUE
DownloadVisualize
BU of 2due by Molmil
crystal structure of a green fluorescent protein variant S65T/H148D at pH 10
Descriptor: Green fluorescent protein
Authors:Shu, X, Remington, S.J.
Deposit date:2006-07-23
Release date:2007-07-10
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies.
Biochemistry, 46, 2007
2FZU
DownloadVisualize
BU of 2fzu by Molmil
Reduced enolate chromophore intermediate for GFP variant
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-02-10
Release date:2006-03-14
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
6OFL
DownloadVisualize
BU of 6ofl by Molmil
Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-ClY); ih circular permutant (50-51)
Descriptor: Green fluorescent protein (GFP); S65T, Y66(3-ClY); ih circular permutant (50-51)
Authors:Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
Deposit date:2019-03-31
Release date:2019-07-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
4XOW
DownloadVisualize
BU of 4xow by Molmil
Structure of rsGreen0.7 in the green-on-state
Descriptor: rsGreen0.7
Authors:De Zitter, E, Van Meervelt, L.
Deposit date:2015-01-16
Release date:2015-09-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Expression-Enhanced Fluorescent Proteins Based on Enhanced Green Fluorescent Protein for Super-resolution Microscopy.
Acs Nano, 9, 2015
7EQ4
DownloadVisualize
BU of 7eq4 by Molmil
Crystal Structure of the N-terminus of Nonstructural protein 1 from SARS-CoV-2
Descriptor: Host translation inhibitor nsp1
Authors:Liu, Y, Ke, Z, Hu, H, Zhao, K, Xiao, J, Xia, Y, Li, Y.
Deposit date:2021-04-29
Release date:2021-06-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Basis and Function of the N Terminus of SARS-CoV-2 Nonstructural Protein 1.
Microbiol Spectr, 9, 2021
2HJO
DownloadVisualize
BU of 2hjo by Molmil
Crystal structure of V224H design intermediate for GFP metal ion reporter
Descriptor: 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-06-30
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
3U0L
DownloadVisualize
BU of 3u0l by Molmil
Crystal structure of the engineered fluorescent protein mRuby, crystal form 1, pH 4.5
Descriptor: ACETATE ION, mRuby
Authors:Akerboom, J, Looger, L.L, Schreiter, E.R.
Deposit date:2011-09-28
Release date:2012-10-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Front Mol Neurosci, 6, 2013
6HOG
DownloadVisualize
BU of 6hog by Molmil
Structure of VPS34 LIR motif bound to GABARAP
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3,Gamma-aminobutyric acid receptor-associated protein, ...
Authors:Mouilleron, S, Birgisdottir, A.B, Bhujbal, Z, Wirth, M, Sjottem, E, Evjen, G, Zhang, W, Lee, R, O'Reilly, N, Tooze, S, Lamark, T, Johansen, T.
Deposit date:2018-09-17
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Members of the autophagy class III phosphatidylinositol 3-kinase complex I interact with GABARAP and GABARAPL1 via LIR motifs.
Autophagy, 15, 2019
4J8A
DownloadVisualize
BU of 4j8a by Molmil
Irradiated-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 145
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
Deposit date:2013-02-14
Release date:2013-05-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
6IR7
DownloadVisualize
BU of 6ir7 by Molmil
Green fluorescent protein variant GFPuv with the modification to 6-hydroxynorleucine at the C-terminus
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-HYDROXY-L-NORLEUCINE, Green fluorescent protein, ...
Authors:Nakatani, T, Yasui, N, Yamashita, A.
Deposit date:2018-11-12
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.277 Å)
Cite:Specific modification at the C-terminal lysine residue of the green fluorescent protein variant, GFPuv, expressed in Escherichia coli.
Sci Rep, 9, 2019
3SSH
DownloadVisualize
BU of 3ssh by Molmil
Engineered high-affinity halide-binding protein derived from YFP: chloride complex
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
Deposit date:2011-07-08
Release date:2012-07-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.277 Å)
Cite:Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
5NI3
DownloadVisualize
BU of 5ni3 by Molmil
sfGFP 204-204 mutant dimer
Descriptor: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
Authors:Worthy, H.L, Rizkallah, P.J.
Deposit date:2017-03-23
Release date:2018-09-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Association of Fluorescent Protein Pairs and Its Significant Impact on Fluorescence and Energy Transfer
Adv Sci, 2020
3LA1
DownloadVisualize
BU of 3la1 by Molmil
High resolution crystal structure of CyPet mutant A167I
Descriptor: Green fluorescent protein, SODIUM ION
Authors:Hu, X.
Deposit date:2010-01-06
Release date:2011-01-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal Structure of CyPet
To be Published
5OX8
DownloadVisualize
BU of 5ox8 by Molmil
Structure of Enhanced Cyan Fluorescent Protein at pH 5.0
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Gotthard, G, von Stetten, D, Clavel, D, Noirclerc-Savoye, M, Royant, A.
Deposit date:2017-09-06
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Chromophore Isomer Stabilization Is Critical to the Efficient Fluorescence of Cyan Fluorescent Proteins.
Biochemistry, 56, 2017
6HUT
DownloadVisualize
BU of 6hut by Molmil
GFP8 - a stabilized variant of cycle-3 GFP
Descriptor: Green fluorescent protein
Authors:Petek, M, Rangel Pereira, M.
Deposit date:2018-10-09
Release date:2020-01-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:GFP8 - a stabilized variant of cycle-3 GFP
To Be Published
7A7L
DownloadVisualize
BU of 7a7l by Molmil
rsEGFP in the green-off state
Descriptor: Green fluorescent protein, TETRAETHYLENE GLYCOL
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon