Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2ZCY
DownloadVisualize
BU of 2zcy by Molmil
yeast 20S proteasome:syringolin A-complex
Descriptor: (2S)-2-[[(2S)-1-[[(5S,8S,9E)-2,7-dioxo-5-propan-2-yl-1,6-diazacyclododeca-3,9-dien-8-yl]amino]-3-methyl-1-oxo-butan-2-yl]carbamoylamino]-3-methyl-butanoic acid, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Dudler, R, Kaiser, M.
Deposit date:2007-11-15
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A plant pathogen virulence factor inhibits the eukaryotic proteasome by a novel mechanism
Nature, 452, 2008
2ZHU
DownloadVisualize
BU of 2zhu by Molmil
Crystal structure of BACE1 at pH 5.0
Descriptor: Beta-secretase 1
Authors:Shimizu, H, Nukina, N.
Deposit date:2008-02-08
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of an active form of BACE1, an enzyme responsible for amyloid beta protein production
Mol.Cell.Biol., 28, 2008
2J4A
DownloadVisualize
BU of 2j4a by Molmil
Human Thyroid hormone receptor beta ligand binding domain in complex with KB131084
Descriptor: 3,5-DIBROMO-4-(3-ISOPROPYL-PHENOXY)BENZOIC ACID, THYROID HORMONE RECEPTOR BETA-1
Authors:Farnegardh, M.
Deposit date:2006-08-28
Release date:2007-09-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Thyroid Receptor Ligands. 6. A High Affinity "Direct Antagonist" Selective for the Thyroid Hormone Receptor.
J.Med.Chem., 49, 2006
2ZHS
DownloadVisualize
BU of 2zhs by Molmil
Crystal structure of BACE1 at pH 4.0
Descriptor: Beta-secretase 1
Authors:Shimizu, H, Nukina, N.
Deposit date:2008-02-08
Release date:2008-04-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of an active form of BACE1, an enzyme responsible for amyloid beta protein production
Mol.Cell.Biol., 28, 2008
2ZJ0
DownloadVisualize
BU of 2zj0 by Molmil
Crystal structure of Mycobacterium tuberculosis S-Adenosyl-L-homocysteine hydrolase in ternary complex with NAD and 2-fluoroadenosine
Descriptor: 2-(6-AMINO-2-FLUORO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Reddy, M.C.M, Gokulan, K, Shetty, N.D, Owen, J.L, Ioerger, T.R, Sacchettini, J.C.
Deposit date:2008-02-29
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structures of Mycobacterium tuberculosis S-adenosyl-L-homocysteine hydrolase in ternary complex with substrate and inhibitors.
Protein Sci., 17, 2008
2ZK4
DownloadVisualize
BU of 2zk4 by Molmil
Human peroxisome proliferator-activated receptor gamma ligand binding domain complexed with 15-oxo-eicosatetraenoic acid
Descriptor: (5E,8E,11Z,13E)-15-oxoicosa-5,8,11,13-tetraenoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Waku, T, Shiraki, T, Oyama, T, Fujimoto, Y, Morikawa, K.
Deposit date:2008-03-12
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structural insight into PPARgamma activation through covalent modification with endogenous fatty acids
J.Mol.Biol., 385, 2009
2ZK0
DownloadVisualize
BU of 2zk0 by Molmil
Human peroxisome proliferator-activated receptor gamma ligand binding domain
Descriptor: Peroxisome proliferator-activated receptor gamma
Authors:Waku, T, Shiraki, T, Oyama, T, Fujimoto, Y, Morikawa, K.
Deposit date:2008-03-12
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural insight into PPARgamma activation through covalent modification with endogenous fatty acids
J.Mol.Biol., 385, 2009
2SFA
DownloadVisualize
BU of 2sfa by Molmil
SERINE PROTEINASE FROM STREPTOMYCES FRADIAE ATCC 14544
Descriptor: SERINE PROTEINASE
Authors:Kitadokoro, K, Tsuzuki, H.
Deposit date:1994-04-25
Release date:1996-06-20
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Purification, characterization, primary structure, crystallization and preliminary crystallographic study of a serine proteinase from Streptomyces fradiae ATCC 14544.
Eur.J.Biochem., 220, 1994
2ZKS
DownloadVisualize
BU of 2zks by Molmil
Structural insights into the proteolytic machinery of apoptosis-inducing Granzyme M
Descriptor: Granzyme M, SULFATE ION, hGzmM inhibitor
Authors:Wu, L.F, Wang, L, Hua, G.Q, Liu, K, Yang, X, Zhai, Y.J, Sun, F, Fan, Z.S.
Deposit date:2008-03-28
Release date:2009-03-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for proteolytic specificity of the human apoptosis-inducing granzyme M
J.Immunol., 183, 2009
2ZM3
DownloadVisualize
BU of 2zm3 by Molmil
Complex Structure of Insulin-like Growth Factor Receptor and Isoquinolinedione Inhibitor
Descriptor: (4Z)-6-bromo-4-({[4-(pyrrolidin-1-ylmethyl)phenyl]amino}methylidene)isoquinoline-1,3(2H,4H)-dione, Insulin-like growth factor 1 receptor
Authors:Xu, W, Mayer, S.C, Boschelli, F, Johnson, M, Dwyer, B.
Deposit date:2008-04-10
Release date:2008-06-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lead identification to generate isoquinolinedione inhibitors of insulin-like growth factor receptor (IGF-1R) for potential use in cancer treatment
Bioorg.Med.Chem.Lett., 18, 2008
2ZN9
DownloadVisualize
BU of 2zn9 by Molmil
Crystal structure of Ca2+-bound form of des3-20ALG-2
Descriptor: CALCIUM ION, DODECAETHYLENE GLYCOL, NONAETHYLENE GLYCOL, ...
Authors:Suzuki, H, Kawasaki, M, Inuzuka, T, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
Deposit date:2008-04-22
Release date:2008-09-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Ca(2+)-Dependent Formation of ALG-2/Alix Peptide Complex: Ca(2+)/EF3-Driven Arginine Switch Mechanism
Structure, 16, 2008
2RG3
DownloadVisualize
BU of 2rg3 by Molmil
Covalent complex structure of elastase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Leukocyte elastase
Authors:Huang, W, Yamamoto, Y.
Deposit date:2007-10-02
Release date:2008-07-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray snapshot of the mechanism of inactivation of human neutrophil elastase by 1,2,5-thiadiazolidin-3-one 1,1-dioxide derivatives.
J.Med.Chem., 51, 2008
2RDF
DownloadVisualize
BU of 2rdf by Molmil
Crystal Structure of staphyloccocal nuclease VIAGAN/E75A variant at cryogenic temperature
Descriptor: PHOSPHATE ION, Thermonuclease
Authors:Baran, K, Schlessman, J.L, Garcia-Moreno, B.E.
Deposit date:2007-09-22
Release date:2008-06-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Electrostatic effects in a network of polar and ionizable groups in staphylococcal nuclease.
J.Mol.Biol., 379, 2008
3I77
DownloadVisualize
BU of 3i77 by Molmil
35/99/170-loops of FXa in SGT
Descriptor: ACETATE ION, CALCIUM ION, SULFATE ION, ...
Authors:Page, M.J, Di Cera, E.
Deposit date:2009-07-08
Release date:2010-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Combinatorial Enzyme Design Probes Allostery and Cooperativity in the Trypsin Fold.
J.Mol.Biol., 399, 2010
2Z6H
DownloadVisualize
BU of 2z6h by Molmil
Crystal Structure of Beta-Catenin Armadillo Repeat Region and Its C-Terminal domain
Descriptor: Catenin beta-1
Authors:Xing, Y, Takemaru, K, Liu, J, Zheng, J, Moon, R, Xu, W.
Deposit date:2007-08-01
Release date:2008-02-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of a Full-Length beta-Catenin
Structure, 16, 2008
2J0Y
DownloadVisualize
BU of 2j0y by Molmil
L-ficolin complexed to b-1,3-D-glucan
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-08
Release date:2007-01-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2RBM
DownloadVisualize
BU of 2rbm by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS I72K at cryogenic temperature
Descriptor: CALCIUM ION, PHOSPHATE ION, THYMIDINE-3',5'-DIPHOSPHATE, ...
Authors:Khangulov, V.S, Schlessman, J.L, Garcia-Moreno, E.B.
Deposit date:2007-09-19
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS I72K at cryogenic temperature
To be Published
2J3O
DownloadVisualize
BU of 2j3o by Molmil
L-ficolin complexed to N-acetyl-D-glucosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-22
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2ZE1
DownloadVisualize
BU of 2ze1 by Molmil
X-ray structure of Bace-1 in complex with compound 6g
Descriptor: 3-bromo-N-[4-[1-(2-carbamimidamido-2-oxo-ethyl)-5-phenyl-pyrrol-2-yl]phenyl]benzamide, Beta-secretase 1
Authors:Chopra, R, Olland, A.
Deposit date:2007-12-05
Release date:2008-12-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Acylguanidine inhibitors of beta-secretase: optimization of the pyrrole ring substituents extending into the S1 and S3 substrate binding pockets.
Bioorg.Med.Chem.Lett., 18, 2008
2Z8K
DownloadVisualize
BU of 2z8k by Molmil
Crystal Structure of Escherichia coli gamma-Glutamyltranspeptidase in Complex with Acivicin
Descriptor: (2S)-AMINO[(5S)-3-CHLORO-4,5-DIHYDROISOXAZOL-5-YL]ACETIC ACID, Gamma-glutamyltranspeptidase
Authors:Wada, K, Irie, M, Fukuyama, K.
Deposit date:2007-09-05
Release date:2008-06-24
Last modified:2012-04-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of Escherichia coli gamma-glutamyltranspeptidase in complex with azaserine and acivicin: novel mechanistic implication for inhibition by glutamine antagonists
J.Mol.Biol., 380, 2008
2ZFT
DownloadVisualize
BU of 2zft by Molmil
Exploring trypsin S3 pocket
Descriptor: (S)-N-(4-carbamimidoylbenzyl)-1-(2-(cyclopentylamino)ethanoyl)pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Brandt, T, Baum, B, Heine, A, Klebe, G.
Deposit date:2008-01-11
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Congeneric but still distinct: how closely related trypsin ligands exhibit different thermodynamic and structural properties
J.Mol.Biol., 405, 2011
3IN7
DownloadVisualize
BU of 3in7 by Molmil
Crystal Structure of the Grb2 SH2 Domain in Complex with a Cyclopropyl-constrained Ac-pY-Q-N-NH2 Tripeptide Mimic
Descriptor: Growth factor receptor-bound protein 2, N~2~-({(1R,2R,3S)-2-(methylcarbamoyl)-3-[4-(phosphonooxy)phenyl]cyclopropyl}carbonyl)-D-glutaminyl-D-aspartamide
Authors:Clements, J.H.
Deposit date:2009-08-11
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Thermodynamic and Structural Effects of Conformational Constraints in Protein-Ligand Interactions. Entropic Paradoxy Associated with Ligand Preorganization.
J.Am.Chem.Soc., 131, 2009
2ZJJ
DownloadVisualize
BU of 2zjj by Molmil
Crystal structure of the human BACE1 catalytic domain in complex with 4-(4-fluoro-benzyl)-piperazine-2-carboxylic acid (2-mercapto-ethyl)-amide
Descriptor: (2S)-4-(4-fluorobenzyl)-N-(2-sulfanylethyl)piperazine-2-carboxamide, Beta-secretase 1
Authors:Randal, M, Lam, M.B, Romanowski, M.J.
Deposit date:2008-03-07
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Fragment-based discovery of novel BACE1 inhibitors using Tethering technology
To be Published
2ZRQ
DownloadVisualize
BU of 2zrq by Molmil
Crystal structure of S324A-subtilisin
Descriptor: CALCIUM ION, Tk-subtilisin
Authors:Tanaka, S, Takeuchi, Y, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2008-08-28
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Tk-subtilisin folded without propeptide: requirement of propeptide for acceleration of folding
Febs Lett., 582, 2008
2ZU6
DownloadVisualize
BU of 2zu6 by Molmil
crystal structure of the eIF4A-PDCD4 complex
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, Eukaryotic initiation factor 4A-I, ...
Authors:Cho, Y, Chang, J.H, Sohn, S.Y.
Deposit date:2008-10-13
Release date:2009-02-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the eIF4A-PDCD4 complex
Proc.Natl.Acad.Sci.Usa, 106, 2009

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon