PDB: 72308 resultsInfo pagesStatus searchChemie searchBIRD

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2HNS	Structure of the AAGU tetraloop Descriptor: 5'-R(*GP*GP*CP*GP*UP*GP*AP*UP*CP*AP*AP*GP*UP*GP*AP*UP*CP*GP*CP*GP*CP*C)-3' Authors: Gaudin, C, Fourmy, F, Yoshizawa, S. Deposit date: 2006-07-13 Release date: 2006-10-31 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Structure of an AAGU Tetraloop and its Contribution to Substrate Selection by yeast RNase III. J.Mol.Biol., 363, 2006
6UEN	Cryo-EM structure of the respiratory syncytial virus RNA polymerase Descriptor: RNA-directed RNA polymerase L, the phosphoprotein (P) of human respiratory syncytial virus Authors: Cao, D, Gao, Y, Liang, B. Deposit date: 2019-09-22 Release date: 2020-01-22 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.67 Å) Cite: Cryo-EM structure of the respiratory syncytial virus RNA polymerase. Nat Commun, 11, 2020
1BGS	RECOGNITION BETWEEN A BACTERIAL RIBONUCLEASE, BARNASE, AND ITS NATURAL INHIBITOR, BARSTAR Descriptor: BARNASE, BARSTAR Authors: Guillet, V, Lapthorn, A, Mauguen, Y. Deposit date: 1993-11-02 Release date: 1994-04-30 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Recognition between a bacterial ribonuclease, barnase, and its natural inhibitor, barstar. Structure, 1, 1993
4XSX	Crystal structure of CBR 703 bound to Escherichia coli RNA polymerase holoenzyme Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Bae, B, Darst, S.A. Deposit date: 2015-01-22 Release date: 2015-07-22 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.708 Å) Cite: CBR antimicrobials inhibit RNA polymerase via at least two bridge-helix cap-mediated effects on nucleotide addition. Proc.Natl.Acad.Sci.USA, 112, 2015
8PJB	Cryo-EM structure of MLE in complex with UUC RNA and ADP Descriptor: ADENOSINE-5'-DIPHOSPHATE, Dosage compensation regulator, MAGNESIUM ION, ... Authors: Jagtap, P.K.A, Hennig, J. Deposit date: 2023-06-23 Release date: 2023-11-01 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.62 Å) Cite: Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless. Mol.Cell, 83, 2023
7PDV	Crystal structure of RBM5 RRM1-zinc finger in complex with RNA Descriptor: RNA (5'-R(P*UP*GP*GP*CP*UP*CP*UP*UP*CP*U)-3'), RNA binding motif protein 5 isoform 1, ZINC ION Authors: Soni, K, Jagtap, P.K.A, Sattler, M. Deposit date: 2021-08-08 Release date: 2022-08-24 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (3.49 Å) Cite: Structural basis for specific RNA recognition by the alternative splicing factor RBM5. Nat Commun, 14, 2023
8PJJ	Cryo-EM structure of MLE in complex with SL7UUC RNA and ADP Descriptor: ADENOSINE-5'-DIPHOSPHATE, Dosage compensation regulator, SL7UUC RNA Authors: Jagtap, P.K.A, Hennig, J. Deposit date: 2023-06-23 Release date: 2023-11-22 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (4.24 Å) Cite: Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless. Mol.Cell, 83, 2023
8OHM	CRYSTAL STRUCTURE OF RNA HELICASE FROM GENOTYPE 1B HEPATITIS C VIRUS: MECHANISM OF UNWINDING DUPLEX RNA Descriptor: RNA HELICASE Authors: Cho, H.S, Ha, N.C, Kang, L.W, Oh, B.H. Deposit date: 1998-03-13 Release date: 1999-04-20 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of RNA helicase from genotype 1b hepatitis C virus. A feasible mechanism of unwinding duplex RNA. J.Biol.Chem., 273, 1998
8SWB	RNase H complex with streopure ASO and RNA Descriptor: DI(HYDROXYETHYL)ETHER, DNA (5'-R(*(OMC)P*(N7X)P*(T39)P*(C5L)P*(A2M))-D(P*(SC)P*(PST)P*(SC)P*AP*(SC)P*(SC)P*(RC)P*(AS)P*(SC)P*(PST))-R(P*(6OO)P*(RFJ)P*(6OO)P*(6OO)P*(6NW))-3'), GLYCEROL, ... Authors: Cho, Y.-J, Iwamoto, N. Deposit date: 2023-05-18 Release date: 2024-05-22 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of RNase H/RNA/PS-ASO complex at an atomic level To Be Published
8SWC	RNase H complex with ASO (OOO) and RNA Descriptor: CALCIUM ION, PHOSPHATE ION, PO ASO, ... Authors: Cho, Y.-J, Iwamoto, N. Deposit date: 2023-05-18 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (2.68 Å) Cite: Crystal structure of RNase H/RNA/PO-ASO complex at an atomic level To Be Published
5A32	Electron cryo-microscopy of Cowpea Mosaic Virus containing RNA-1 (CPMVb) Descriptor: RNA2 POLYPROTEIN Authors: Hesketh, E.L, Meshcheriakova, Y, Dent, K.C, Saxena, P, Thompson, R, Cockburn, J.J, Lomonossoff, G.P, Ranson, N.A. Deposit date: 2015-05-27 Release date: 2015-12-23 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.44 Å) Cite: Mechanisms of assembly and genome packaging in an RNA virus revealed by high-resolution cryo-EM. Nat Commun, 6, 2015
1YT3	Crystal Structure of Escherichia coli RNase D, an exoribonuclease involved in structured RNA processing Descriptor: Ribonuclease D, SULFATE ION, ZINC ION Authors: Zuo, Y, Wang, Y, Malhotra, A. Deposit date: 2005-02-09 Release date: 2005-08-09 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal Structure of Escherichia coli RNase D, an Exoribonuclease Involved in Structured RNA Processing Structure, 13, 2005
6RT5	The YTH domain of YTHDC1 protein in complex with Gm6AC oligonucleotide Descriptor: RNA (5'-R(*(6MZ)P*C)-3'), SULFATE ION, YTH domain-containing protein 1 Authors: Bedi, R, Sledz, P, Caflisch, A. Deposit date: 2019-05-22 Release date: 2019-11-27 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.303 Å) Cite: Flexible Binding of m6A Reader Protein YTHDC1 to Its Preferred RNA Motif. J Chem Theory Comput, 15, 2019
6RT6	The YTH domain of YTHDC1 protein in complex with GGm6AC oligonucleotide Descriptor: RNA (5'-R(*(6MZ)P*C)-3'), SULFATE ION, YTH domain-containing protein 1 Authors: Bedi, R, Sledz, P, Caflisch, A. Deposit date: 2019-05-22 Release date: 2019-11-27 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.461 Å) Cite: Flexible Binding of m6A Reader Protein YTHDC1 to Its Preferred RNA Motif. J Chem Theory Comput, 15, 2019
6RT7	The YTH domain of YTHDC1 protein in complex with Gm6ACU oligonucleotide Descriptor: RNA (5'-R(*(6MZ)P*C)-3'), SULFATE ION, YTH domain-containing protein 1 Authors: Bedi, R, Sledz, P, Caflisch, A. Deposit date: 2019-05-22 Release date: 2019-11-27 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.73 Å) Cite: Flexible Binding of m6A Reader Protein YTHDC1 to Its Preferred RNA Motif. J Chem Theory Comput, 15, 2019
1BSE	CRYSTAL STRUCTURAL ANALYSIS OF MUTATIONS IN THE HYDROPHOBIC CORES OF BARNASE Descriptor: BARNASE Authors: Buckle, A.M, Henrick, K, Fersht, A.R. Deposit date: 1993-07-19 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structural analysis of mutations in the hydrophobic cores of barnase. J.Mol.Biol., 234, 1993
1BSA	CRYSTAL STRUCTURAL ANALYSIS OF MUTATIONS IN THE HYDROPHOBIC CORES OF BARNASE Descriptor: BARNASE Authors: Buckle, A.M, Henrick, K, Fersht, A.R. Deposit date: 1993-07-19 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structural analysis of mutations in the hydrophobic cores of barnase. J.Mol.Biol., 234, 1993
1BSB	CRYSTAL STRUCTURAL ANALYSIS OF MUTATIONS IN THE HYDROPHOBIC CORES OF BARNASE Descriptor: BARNASE Authors: Buckle, A.M, Henrick, K, Fersht, A.R. Deposit date: 1993-07-19 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structural analysis of mutations in the hydrophobic cores of barnase. J.Mol.Biol., 234, 1993
1BSD	CRYSTAL STRUCTURAL ANALYSIS OF MUTATIONS IN THE HYDROPHOBIC CORES OF BARNASE Descriptor: BARNASE Authors: Buckle, A.M, Henrick, K, Fersht, A.R. Deposit date: 1993-07-19 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structural analysis of mutations in the hydrophobic cores of barnase. J.Mol.Biol., 234, 1993
1BSC	CRYSTAL STRUCTURAL ANALYSIS OF MUTATIONS IN THE HYDROPHOBIC CORES OF BARNASE Descriptor: BARNASE Authors: Buckle, A.M, Henrick, K, Fersht, A.R. Deposit date: 1993-07-19 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structural analysis of mutations in the hydrophobic cores of barnase. J.Mol.Biol., 234, 1993
7A6H	Cryo-EM structure of human apo RNA Polymerase III Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ... Authors: Girbig, M, Misiaszek, A.D, Vorlaender, M.K, Mueller, C.W. Deposit date: 2020-08-25 Release date: 2021-02-03 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryo-EM structures of human RNA polymerase III in its unbound and transcribing states. Nat.Struct.Mol.Biol., 28, 2021
6SY4	TetR in complex with the TetR-binding RNA-aptamer K1 Descriptor: TetR-binding aptamer K1 (43-MER), Tetracycline repressor protein class B from transposon Tn10 Authors: Grau, F.C, Muller, Y.A, Suess, B, Groher, F, Jaeger, J. Deposit date: 2019-09-27 Release date: 2020-02-05 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.695 Å) Cite: The complex formed between a synthetic RNA aptamer and the transcription repressor TetR is a structural and functional twin of the operator DNA-TetR regulator complex. Nucleic Acids Res., 48, 2020
6RT4	The YTH domain of YTHDC1 protein in complex with m6ACU oligonucleotide Descriptor: RNA (5'-R(*(6MZ)P*C)-3'), SULFATE ION, YTH domain-containing protein 1 Authors: Bedi, R, Sledz, P, Caflisch, A. Deposit date: 2019-05-22 Release date: 2019-11-27 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.49 Å) Cite: Flexible Binding of m6A Reader Protein YTHDC1 to Its Preferred RNA Motif. J Chem Theory Comput, 15, 2019
1B2X	BARNASE WILDTYPE STRUCTURE AT PH 7.5 FROM A CRYO_COOLED CRYSTAL AT 100K Descriptor: PROTEIN (BARNASE), ZINC ION Authors: Harrison, P, Vaughan, C.K, Buckle, A.M, Fersht, A.R. Deposit date: 1998-12-03 Release date: 1998-12-09 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A structural double-mutant cycle: estimating the strength of a buried salt bridge in barnase. Acta Crystallogr.,Sect.D, 58, 2002
3FKI	12-Subunit RNA Polymerase II Refined with Zn-SAD data Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... Authors: Meyer, P.A, Ye, P, Suh, M.H, Zhang, M, Fu, J. Deposit date: 2008-12-16 Release date: 2009-03-10 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.88 Å) Cite: Structure of the 12-Subunit RNA Polymerase II Refined with the Aid of Anomalous Diffraction Data J.Biol.Chem., 284, 2009

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