Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1MN0
DownloadVisualize
BU of 1mn0 by Molmil
Crystal structure of galactose mutarotase from lactococcus lactis complexed with D-xylose
Descriptor: Aldose 1-epimerase, NICKEL (II) ION, alpha-D-xylopyranose
Authors:Thoden, J.B, Kim, J, Raushel, F.M, Holden, H.M.
Deposit date:2002-09-04
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and kinetic studies of sugar binding to galactose mutarotase from Lactococcus lactis.
J.Biol.Chem., 277, 2002
5LT2
DownloadVisualize
BU of 5lt2 by Molmil
nucleotide-free kinesin-1 motor domain, P1 crystal form
Descriptor: Kinesin-like protein, SULFATE ION
Authors:Cao, L, Gigant, B.
Deposit date:2016-09-06
Release date:2017-03-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structural switch of nucleotide-free kinesin.
Sci Rep, 7, 2017
9GGY
DownloadVisualize
BU of 9ggy by Molmil
Human KRas4A (GDP) in complex with compound 29
Descriptor: 1,2-ETHANEDIOL, 12-(1-aza-5-azanidaspiro[4.5]decan-8-yl)-18-[(1-chloro-3-hydroxy-1,2,3-benzothiadiazol-5-yl)-lambda4-sulfanylidene]-4-hydroxy-3,3-dioxo-3lambda6-thia-1,4,12,17-tetraza-2lambda6-thia-6,10,19-triaza-3, GTPase KRas, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-08-14
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.266 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
1DXY
DownloadVisualize
BU of 1dxy by Molmil
STRUCTURE OF D-2-HYDROXYISOCAPROATE DEHYDROGENASE
Descriptor: 2-OXO-4-METHYLPENTANOIC ACID, D-2-HYDROXYISOCAPROATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Dengler, U, Niefind, K, Kiess, M, Schomburg, D.
Deposit date:1996-08-13
Release date:1997-06-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of a ternary complex of D-2-hydroxyisocaproate dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate at 1.9 A resolution.
J.Mol.Biol., 267, 1997
9GGX
DownloadVisualize
BU of 9ggx by Molmil
Human KRas4A (GMPPNP) in complex with compound 19
Descriptor: (3E,15S)-17-(cis-4-aminocyclohexyl)-7-chloro-10,15,20-trihydroxy-2,2-dioxo-2-lambda-6,5-dithia-3,12,17-triazatetracyclo[17.3.1.04,12.06,11]tricosa-1(22),3,6(11),7,9,19(23),20-heptaen-18-one, COBALT (II) ION, GTPase KRas, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-08-14
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
5LU5
DownloadVisualize
BU of 5lu5 by Molmil
A quantum half-site enzyme
Descriptor: 7-O-phosphono-D-glycero-alpha-D-manno-heptopyranose, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Vivoli, M, Harmer, N.J, Pang, J.
Deposit date:2016-09-08
Release date:2017-12-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A half-site multimeric enzyme achieves its cooperativity without conformational changes.
Sci Rep, 7, 2017
1DDO
DownloadVisualize
BU of 1ddo by Molmil
REDUCED D-AMINO ACID OXIDASE FROM PIG KIDNEY IN COMPLEX WITH IMINO-TRP
Descriptor: D-AMINO ACID OXIDASE, D-TRYPTOPHAN, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Todone, F, Mattevi, A.
Deposit date:1997-01-16
Release date:1997-07-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Active site plasticity in D-amino acid oxidase: a crystallographic analysis.
Biochemistry, 36, 1997
2PB1
DownloadVisualize
BU of 2pb1 by Molmil
Exo-B-(1,3)-Glucanase from Candida Albicans in complex with unhydrolysed and covalently linked 2,4-dinitrophenyl-2-deoxy-2-fluoro-B-D-glucopyranoside at 1.9 A
Descriptor: 2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside, 2-deoxy-2-fluoro-alpha-D-glucopyranose, Hypothetical protein XOG1
Authors:Cutfield, S.M, Cutfield, J.F, Davies, G.J, Sullivan, P.A.
Deposit date:2007-03-28
Release date:2007-04-10
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exo-B-(1,3)-Glucanase from Candida Albicans in complex with unhydrolysed and covalently linked 2,4-dinitrophenyl-2-deoxy-2-fluoro-B-D-glucopyranoside at 1.9 A
To be Published
5LUE
DownloadVisualize
BU of 5lue by Molmil
Minor form of the recombinant cytotoxin-1 from N. oxiana
Descriptor: VC-1=CYTOTOXIN
Authors:Dubovskii, P.V, Dubinnyi, M.A, Shulepko, M.A, Lyukmanova, E.N, Dolgikh, D.A, Kirpichnikov, M.P, Efremov, R.G.
Deposit date:2016-09-08
Release date:2017-09-20
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Structural and Dynamic "Portraits" of Recombinant and Native Cytotoxin I from Naja oxiana: How Close Are They?
Biochemistry, 56, 2017
1E2O
DownloadVisualize
BU of 1e2o by Molmil
CATALYTIC DOMAIN FROM DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE
Descriptor: DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE, SULFATE ION
Authors:Knapp, J.E, Mitchell, D.T, Yazdi, M.A, Ernst, S.R, Reed, L.J, Hackert, M.L.
Deposit date:1998-05-26
Release date:1998-12-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the truncated cubic core component of the Escherichia coli 2-oxoglutarate dehydrogenase multienzyme complex.
J.Mol.Biol., 280, 1998
5LUT
DownloadVisualize
BU of 5lut by Molmil
Structures of DHBN domain of Gallus gallus BLM helicase
Descriptor: BLM helicase, PHOSPHATE ION
Authors:Shi, J, Chen, W.-F, Zhang, B, Fan, S.-H, Ai, X, Liu, N.-N, Rety, S, Xi, X.-G.
Deposit date:2016-09-09
Release date:2017-03-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:A helical bundle in the N-terminal domain of the BLM helicase mediates dimer and potentially hexamer formation.
J. Biol. Chem., 292, 2017
1DFI
DownloadVisualize
BU of 1dfi by Molmil
X-RAY STRUCTURE OF ESCHERICHIA COLI ENOYL REDUCTASE WITH BOUND NAD
Descriptor: ENOYL ACYL CARRIER PROTEIN REDUCTASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Baldock, C, Rafferty, J.B, Rice, D.W.
Deposit date:1997-01-16
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:A mechanism of drug action revealed by structural studies of enoyl reductase.
Science, 274, 1996
9GGZ
DownloadVisualize
BU of 9ggz by Molmil
Human KRas4A (GMPPNP) in complex with compound 31
Descriptor: (3Z)-18-(4-aminocyclohexyl)-7-chloro-10-hydroxy-2,2-dioxo-21-[[(3S)-pyrrolidin-3-yl]amino]-2-lambda-6,5-dithia-3,12,18,22-tetrazatetracyclo[18.3.1.04,12.06,11]tetracosa-1(23),3,6,8,10,20(24),21-heptaen-19-one, COBALT (II) ION, GTPase KRas, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-08-14
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
5LVU
DownloadVisualize
BU of 5lvu by Molmil
XiaF (apo) from Streptomyces sp.
Descriptor: SULFATE ION, XiaF protein
Authors:Kugel, S, Baunach, M, Baer, P, Ishida-Ito, M, Sundaram, S, Xu, Z, Groll, M, Hertweck, C.
Deposit date:2016-09-14
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Cryptic indole hydroxylation by a non-canonical terpenoid cyclase parallels bacterial xenobiotic detoxification.
Nat Commun, 8, 2017
1DIC
DownloadVisualize
BU of 1dic by Molmil
STRUCTURE OF 3,4-DICHLOROISOCOUMARIN-INHIBITED FACTOR D
Descriptor: 3,4-DICHLOROISOCOUMARIN, FACTOR D, OXYGEN ATOM
Authors:Cole, L.B, Kilpatrick, J.M, Chu, N, Babu, Y.S.
Deposit date:1998-07-08
Release date:1999-07-22
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of 3,4-dichloroisocoumarin-inhibited factor D.
Acta Crystallogr.,Sect.D, 54, 1998
9GH0
DownloadVisualize
BU of 9gh0 by Molmil
Human KRas4A (GMPPNP) in complex with compound 32
Descriptor: (3Z)-18-(4-aminocyclohexyl)-7-chloro-10-hydroxy-2,2-dioxo-21-piperazin-1-yl-2-lambda-6,5-dithia-3,12,18,22-tetrazatetracyclo[18.3.1.04,12.06,11]tetracosa-1(23),3,6,8,10,20(24),21-heptaen-19-one, COBALT (II) ION, GTPase KRas, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-08-14
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
5LW3
DownloadVisualize
BU of 5lw3 by Molmil
Azotobacter vinelandii Mannuronan C-5 epimerase AlgE6 A-module
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Rothweiler, U.
Deposit date:2016-09-15
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Azotobacter vinelandii Mannuronan C-5 epimerase AlgE6 A-module
To Be Published
5LWN
DownloadVisualize
BU of 5lwn by Molmil
Crystal structure of JAK3 in complex with Compound 5 (FM409)
Descriptor: (2~{S})-2-cyano-~{N},~{N}-dimethyl-3-[5-[3-[(1~{S},2~{R})-2-methylcyclohexyl]-3,5,8,10-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-1,4,6,8,11-pentaen-4-yl]furan-2-yl]propanamide, (~{Z})-2-cyano-~{N},~{N}-dimethyl-3-[5-[3-[(1~{S},2~{R})-2-methylcyclohexyl]-3,5,8,10-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-1,4,6,8,11-pentaen-4-yl]furan-2-yl]prop-2-enamide, 1,2-ETHANEDIOL, ...
Authors:Chaikuad, A, Forster, M, Mukhopadhyay, S, Kupinska, K, Ellis, K, Mahajan, P, Burgess-Brown, N, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Laufer, S.A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2016-09-18
Release date:2016-10-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Selective JAK3 Inhibitors with a Covalent Reversible Binding Mode Targeting a New Induced Fit Binding Pocket.
Cell Chem Biol, 23, 2016
1DAK
DownloadVisualize
BU of 1dak by Molmil
DETHIOBIOTIN SYNTHETASE FROM ESCHERICHIA COLI, COMPLEX REACTION INTERMEDIATE ADP AND MIXED ANHYDRIDE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DETHIOBIOTIN SYNTHETASE, MAGNESIUM ION, ...
Authors:Kaeck, H, Gibson, K.J, Lindqvist, Y, Schneider, G.
Deposit date:1998-03-31
Release date:1999-04-06
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Snapshot of a phosphorylated substrate intermediate by kinetic crystallography.
Proc.Natl.Acad.Sci.USA, 95, 1998
1DAO
DownloadVisualize
BU of 1dao by Molmil
COVALENT ADDUCT OF D-AMINO ACID OXIDASE FROM PIG KIDNEY WITH 3-METHYL-2-OXO-VALERIC ACID
Descriptor: D-AMINO ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE-N5-ISOBUTYL KETONE
Authors:Todone, F, Mattevi, A.
Deposit date:1997-01-16
Release date:1997-07-23
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Active site plasticity in D-amino acid oxidase: a crystallographic analysis.
Biochemistry, 36, 1997
5LZ0
DownloadVisualize
BU of 5lz0 by Molmil
Llama nanobody PorM_01
Descriptor: PorM nanobody
Authors:Duhoo, Y, Leone, P, Roussel, A.
Deposit date:2016-09-29
Release date:2017-05-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Camelid nanobodies used as crystallization chaperones for different constructs of PorM, a component of the type IX secretion system from Porphyromonas gingivalis.
Acta Crystallogr F Struct Biol Commun, 73, 2017
9GGU
DownloadVisualize
BU of 9ggu by Molmil
Human KRas4A (GDP) in complex with compound 9
Descriptor: 1,2-ETHANEDIOL, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Schuettelkopf, A.W.
Deposit date:2024-08-14
Release date:2025-04-16
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 68, 2025
1DJY
DownloadVisualize
BU of 1djy by Molmil
PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH INOSITOL-2,4,5-TRISPHOSPHATE
Descriptor: ACETATE ION, CALCIUM ION, D-MYO-INOSITOL-2,4,5-TRIPHOSPHATE, ...
Authors:Essen, L.-O, Perisic, O, Williams, R.L.
Deposit date:1996-08-24
Release date:1997-07-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural mapping of the catalytic mechanism for a mammalian phosphoinositide-specific phospholipase C.
Biochemistry, 36, 1997
5LXE
DownloadVisualize
BU of 5lxe by Molmil
F420-dependent glucose-6-phosphate dehydrogenase from Rhodococcus jostii RHA1
Descriptor: F420-dependent glucose-6-phosphate dehydrogenase 1, GLYCEROL, SULFATE ION
Authors:Nguyen, Q.-T, Trinco, G, Binda, C, Mattevi, A, Fraaije, M.W.
Deposit date:2016-09-20
Release date:2016-12-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Discovery and characterization of an F420-dependent glucose-6-phosphate dehydrogenase (Rh-FGD1) from Rhodococcus jostii RHA1.
Appl. Microbiol. Biotechnol., 101, 2017
1DSD
DownloadVisualize
BU of 1dsd by Molmil
NMR STUDY OF DNA (5'-D(*GP*AP*TP*GP*CP*TP*TP*C)-3') T:T MISMATCHED DUPLEX COMPLEXED WITH ACTINOMYCIN D, MINIMIZED AVERAGE STRUCTURE
Descriptor: ACTINOMYCIN D, DNA (5'-D(*GP*AP*TP*GP*CP*TP*TP*C)-3')
Authors:Lian, C, Robinson, H, Wang, A.H.-J.
Deposit date:1996-08-10
Release date:1996-12-07
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Structure of Actinomycin D Bound with (Gaagcttc)2 and (Gatgcttc)2 and its Binding to the (Cag)N:(Ctg)N Triplet Sequence by NMR Analysis
J.Am.Chem.Soc., 118, 1996

243911

數據於2025-10-29公開中

PDB statisticsPDBj update infoContact PDBjnumon