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9GGZ

Human KRas4A (GMPPNP) in complex with compound 31

This is a non-PDB format compatible entry.
Summary for 9GGZ
Entry DOI10.2210/pdb9ggz/pdb
Related9G0Y 9G4B 9GGT 9GGU 9GGV 9GGW 9GGX 9GGY 9GH0 9GH1 9GH2
DescriptorGTPase KRas, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, MAGNESIUM ION, ... (6 entities in total)
Functional Keywordsras, gtpase, inhibitor, cell cycle
Biological sourceHomo sapiens (human)
Total number of polymer chains1
Total formula weight20905.66
Authors
Schuettelkopf, A.W. (deposition date: 2024-08-14, release date: 2025-04-16)
Primary citationParry, C.W.,Pellicano, F.,Schuttelkopf, A.W.,Beyer, K.S.,Bower, J.,Bryson, A.,Cameron, K.,Cerutti, N.M.,Clark, J.P.,Davidson, S.C.,Davies, K.,Drysdale, M.J.,Engelman, J.,Estevan-Barber, A.,Gohlke, A.,Gray, C.H.,Guthy, D.A.,Hong, M.,Hopkins, A.,Hutchinson, L.D.,Konczal, J.,Maira, M.,McArthur, D.,Mezna, M.,McKinnon, H.,Nepravishta, R.,Ostermann, N.,Pasquali, C.C.,Pollock, K.,Pugliese, A.,Rooney, N.,Schmiedeberg, N.,Shaw, P.,Velez-Vega, C.,West, C.,West, R.,Zecri, F.,Taylor, J.B.
Reversible Small Molecule Multivariant Ras Inhibitors Display Tunable Affinity for the Active and Inactive Forms of Ras.
J.Med.Chem., 2025
Cited by
PubMed Abstract: Activating mutations of Ras are one of the most prevalent drivers of cancer and are often associated with poor clinical outcomes. Despite FDA approval for two irreversible inhibitors that target the inactive state of KRas, significant unmet clinical need still exists, and the susceptibility of non-G12C mutants to inactive-state inhibition remains unclear. Here we report the discovery of a novel series of reversible inhibitors that bind in an enlarged version of the switch I-II pocket with nanomolar affinities. Dependent on chemotype these can either preferentially bind to the inactive or active state or bind both with similar affinity. The active-state binders inhibit the Raf interaction for wild-type Ras, and a broad range of oncogenic KRas mutants with nanomolar potency. A subseries of these molecules displays cellular inhibition of Ras-Raf binding, as well as decreased phosphorylation of the downstream protein ERK, demonstrating that potent multivariant Ras inhibitors can be accessed from this novel pocket.
PubMed: 40162713
DOI: 10.1021/acs.jmedchem.4c02929
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.37 Å)
Structure validation

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