Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3GMO
DownloadVisualize
BU of 3gmo by Molmil
Structure of mouse CD1d in complex with C8PhF
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 8-(4-fluorophenyl)-N-{(1S,2S,3R)-1-[(alpha-D-galactopyranosyloxy)methyl]-2,3-dihydroxyheptadecyl}octanamide, ...
Authors:Schiefner, A, Wilson, I.A.
Deposit date:2009-03-14
Release date:2009-11-10
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural evaluation of potent NKT cell agonists: implications for design of novel stimulatory ligands.
J.Mol.Biol., 394, 2009
2YNM
DownloadVisualize
BU of 2ynm by Molmil
Structure of the ADPxAlF3-Stabilized Transition State of the Nitrogenase-like Dark-Operative Protochlorophyllide Oxidoreductase Complex from Prochlorococcus marinus with Its Substrate Protochlorophyllide a
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ...
Authors:Krausze, J, Lange, C, Heinz, D.W, Moser, J.
Deposit date:2012-10-16
Release date:2013-01-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Adp-Aluminium Fluoride-Stabilized Protochlorophyllide Oxidoreductase Complex.
Proc.Natl.Acad.Sci.USA, 110, 2013
7X2S
DownloadVisualize
BU of 7x2s by Molmil
Crystal Structure of hetero-Diels-Alderase PycR1 in complex with Neosetophomone B and tropolone o-quinone methide
Descriptor: (1~{S},3~{R},11~{R},13~{S},14~{Z},18~{E})-1,8,14,17,17-pentamethyl-5,13-bis(oxidanyl)-2-oxatricyclo[9.9.0.0^{3,9}]icosa-4,7,9,14,18-pentaen-6-one, 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Zhou, J, Lu, J.
Deposit date:2022-02-26
Release date:2023-04-05
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Calcium-dependent glycosylated enzyme in the tandem hetero-Diels-Alder reaction
To Be Published
4IDM
DownloadVisualize
BU of 4idm by Molmil
Crystal structure of the Delta-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis
Descriptor: Delta-1-pyrroline-5-carboxylate dehydrogenase
Authors:Lagautriere, T, Bashiri, G, Baker, E.N.
Deposit date:2012-12-12
Release date:2013-12-18
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Characterization of the proline-utilization pathway in Mycobacterium tuberculosis through structural and functional studies.
Acta Crystallogr.,Sect.D, 70, 2014
1HDZ
DownloadVisualize
BU of 1hdz by Molmil
THREE-DIMENSIONAL STRUCTURES OF THREE HUMAN ALCOHOL DEHYDROGENASE VARIANTS: CORRELATIONS WITH THEIR FUNCTIONAL DIFFERENCES
Descriptor: ALCOHOL DEHYDROGENASE, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Hurley, T.D, Amzel, L.M.
Deposit date:1993-10-15
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of three human beta alcohol dehydrogenase variants. Correlations with their functional differences.
J.Mol.Biol., 239, 1994
2INQ
DownloadVisualize
BU of 2inq by Molmil
Neutron Crystal Structure of Escherichia coli Dihydrofolate Reductase Bound to the Anti-cancer drug, Methotrexate
Descriptor: Dihydrofolate reductase, N-(4-{[(2,4-DIAMINOPTERIDIN-1-IUM-6-YL)METHYL](METHYL)AMINO}BENZOYL)-L-GLUTAMIC ACID
Authors:Bennett, B.C, Langan, P.A, Coates, L, Schoenborn, B, Dealwis, C.G.
Deposit date:2006-10-08
Release date:2007-02-06
Last modified:2023-08-30
Method:NEUTRON DIFFRACTION (2.2 Å)
Cite:Neutron diffraction studies of Escherichia coli dihydrofolate reductase complexed with methotrexate.
Proc.Natl.Acad.Sci.Usa, 103, 2006
1DB1
DownloadVisualize
BU of 1db1 by Molmil
CRYSTAL STRUCTURE OF THE NUCLEAR RECEPTOR FOR VITAMIN D COMPLEXED TO VITAMIN D
Descriptor: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL, VITAMIN D NUCLEAR RECEPTOR
Authors:Rochel, N, Wurtz, J.M, Mitschler, A, Klaholz, B, Moras, D.
Deposit date:1999-11-02
Release date:2000-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the nuclear receptor for vitamin D bound to its natural ligand.
Mol.Cell, 5, 2000
1DGH
DownloadVisualize
BU of 1dgh by Molmil
HUMAN ERYTHROCYTE CATALASE 3-AMINO-1,2,4-TRIAZOLE COMPLEX
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTEIN (CATALASE), PROTOPORPHYRIN IX CONTAINING FE
Authors:Putnam, C.D, Arvai, A.S, Bourne, Y, Tainer, J.A.
Deposit date:1999-11-24
Release date:2000-02-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Active and inhibited human catalase structures: ligand and NADPH binding and catalytic mechanism.
J.Mol.Biol., 296, 2000
4J3Q
DownloadVisualize
BU of 4j3q by Molmil
Crystal structure of truncated catechol oxidase from Aspergillus oryzae
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, ...
Authors:Hakulinen, N, Gasparetti, C, Kaljunen, H, Rouvinen, J.
Deposit date:2013-02-06
Release date:2013-11-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of an extracellular catechol oxidase from the ascomycete fungus Aspergillus oryzae.
J.Biol.Inorg.Chem., 18, 2013
1DFG
DownloadVisualize
BU of 1dfg by Molmil
X-RAY STRUCTURE OF ESCHERICHIA COLI ENOYL REDUCTASE WITH BOUND NAD AND BENZO-DIAZABORINE
Descriptor: 2-(TOLUENE-4-SULFONYL)-2H-BENZO[D][1,2,3]DIAZABORININ-1-OL, ENOYL ACYL CARRIER PROTEIN REDUCTASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Baldock, C, Rafferty, J.B, Rice, D.W.
Deposit date:1997-01-16
Release date:1998-01-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A mechanism of drug action revealed by structural studies of enoyl reductase.
Science, 274, 1996
4F3I
DownloadVisualize
BU of 4f3i by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with MS417 inhibitor
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, methyl [(6S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl]acetate
Authors:Joshua, J, Zhou, M.-M, Plotnikov, A.N.
Deposit date:2012-05-09
Release date:2012-09-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Down-regulation of NF-{kappa}B Transcriptional Activity in HIV-associated Kidney Disease by BRD4 Inhibition.
J.Biol.Chem., 287, 2012
3VKZ
DownloadVisualize
BU of 3vkz by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at atmospheric pressure
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-11-28
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
5O9S
DownloadVisualize
BU of 5o9s by Molmil
HsNMT1 in complex with CoA and Myristoylated-GKSNSKLK octapeptide
Descriptor: CHLORIDE ION, GLYCEROL, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Dian, C, Meinnel, T, Giglione, C.
Deposit date:2017-06-20
Release date:2018-06-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and genomic decoding of human and plant myristoylomes reveals a definitive recognition pattern.
Nat. Chem. Biol., 14, 2018
1DZN
DownloadVisualize
BU of 1dzn by Molmil
Asp170Ser mutant of vanillyl-alcohol oxidase
Descriptor: 2-methoxy-4-[(1E)-prop-1-en-1-yl]phenol, FLAVIN-ADENINE DINUCLEOTIDE, VANILLYL-ALCOHOL OXIDASE
Authors:Van Den heuvel, R.H.H, Fraaije, M.W, Van Berkel, W.J.H, Mattevi, A.
Deposit date:2000-03-05
Release date:2000-03-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Asp170 is Crucial for the Redox Properties of Vanillyl-Alcohol Oxidase
J.Biol.Chem., 275, 2000
1HKX
DownloadVisualize
BU of 1hkx by Molmil
Crystal structure of calcium/calmodulin-dependent protein kinase
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE II ALPHA CHAIN, CHLORIDE ION, ...
Authors:Hoelz, A, Nairn, A.C, Kuriyan, J.
Deposit date:2003-03-12
Release date:2003-06-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of a Tetradecameric Assembly of the Association Domain of Ca2+/Calmodulin-Dependent Kinase II
Mol.Cell, 11, 2003
6EG0
DownloadVisualize
BU of 6eg0 by Molmil
Crystal structure of Dpr4 Ig1-Ig2 in complex with DIP-Eta Ig1-Ig3
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cosmanescu, F, Shapiro, L.
Deposit date:2018-08-17
Release date:2018-11-28
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Neuron-Subtype-Specific Expression, Interaction Affinities, and Specificity Determinants of DIP/Dpr Cell Recognition Proteins.
Neuron, 100, 2018
1HJ4
DownloadVisualize
BU of 1hj4 by Molmil
Cytochrome cd1 Nitrite Reductase, x-ray reduced dioxygen complex
Descriptor: GLYCEROL, HEME C, HEME D, ...
Authors:Sjogren, T, Hajdu, J.
Deposit date:2001-01-08
Release date:2001-01-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the bound dioxygen species in the cytochrome oxidase reaction of cytochrome cd1 nitrite reductase.
J. Biol. Chem., 276, 2001
1HJ3
DownloadVisualize
BU of 1hj3 by Molmil
Cytochrome cd1 Nitrite Reductase, dioxygen complex
Descriptor: GLYCEROL, HEME C, HEME D, ...
Authors:Sjogren, T, Hajdu, J.
Deposit date:2001-01-08
Release date:2001-01-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the bound dioxygen species in the cytochrome oxidase reaction of cytochrome cd1 nitrite reductase.
J. Biol. Chem., 276, 2001
1HJ5
DownloadVisualize
BU of 1hj5 by Molmil
Cytochrome cd1 Nitrite Reductase, reoxidised enzyme
Descriptor: GLYCEROL, HEME C, HEME D, ...
Authors:Sjogren, T, Hajdu, J.
Deposit date:2001-01-08
Release date:2001-01-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structure of the bound dioxygen species in the cytochrome oxidase reaction of cytochrome cd1 nitrite reductase.
J. Biol. Chem., 276, 2001
7F5J
DownloadVisualize
BU of 7f5j by Molmil
The crystal structure of VyPAL2-I244V, a more efficient mutant of VyPAL2 peptide asparaginyl ligase in its active enzyme form
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hu, S, Sahili, A, Lescar, J.
Deposit date:2021-06-22
Release date:2022-06-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:Structural basis for proenzyme maturation, substrate recognition, and ligation by a hyperactive peptide asparaginyl ligase.
Plant Cell, 34, 2022
7F5Q
DownloadVisualize
BU of 7f5q by Molmil
The crystal structure of VyPAL2 peptide asparaginyl ligase in its active enzyme form
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hu, S, Sahili, A, Lescar, J.
Deposit date:2021-06-22
Release date:2022-06-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for proenzyme maturation, substrate recognition, and ligation by a hyperactive peptide asparaginyl ligase.
Plant Cell, 34, 2022
4F7J
DownloadVisualize
BU of 4f7j by Molmil
Crystal structure of human CDK8/CYCC in complex with compound 3 (1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-(2-hydroxyethyl)urea)
Descriptor: 1,2-ETHANEDIOL, 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-(2-hydroxyethyl)urea, Cyclin-C, ...
Authors:Schneider, E.V, Boettcher, J, Huber, R, Maskos, K.
Deposit date:2012-05-16
Release date:2013-05-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure-kinetic relationship study of CDK8/CycC specific compounds.
Proc.Natl.Acad.Sci.USA, 110, 2013
1GQ1
DownloadVisualize
BU of 1gq1 by Molmil
CYTOCHROME CD1 NITRITE REDUCTASE, Y25S mutant, OXIDISED FORM
Descriptor: CYTOCHROME CD1 NITRITE REDUCTASE, GLYCEROL, HEME C, ...
Authors:Sjogren, T, Gordon, E.H.J, Lofqvist, M, Richter, C.D, Hajdu, J, Ferguson, S.J.
Deposit date:2001-11-19
Release date:2002-11-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure and Kinetic Properties of Paracoccus Pantotrophus Cytochrome Cd1 Nitrite Reductase with the D1 Heme Active Site Ligand Tyrosine 25 Replaced by Serine
J.Biol.Chem., 278, 2003
1YLR
DownloadVisualize
BU of 1ylr by Molmil
The structure of E.coli nitroreductase with bound acetate, crystal form 1
Descriptor: ACETATE ION, FLAVIN MONONUCLEOTIDE, Oxygen-insensitive NAD(P)H nitroreductase
Authors:Race, P.R, Lovering, A.L, Green, R.M, Ossor, A, White, S.A, Searle, P.F, Wrighton, C.J, Hyde, E.I.
Deposit date:2005-01-19
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and mechanistic studies of Escherichia coli nitroreductase with the antibiotic nitrofurazone. Reversed binding orientations in different redox states of the enzyme.
J.Biol.Chem., 280, 2005
4F6U
DownloadVisualize
BU of 4f6u by Molmil
Crystal structure of human CDK8/CYCC in complex with compound 5 (1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-[3-(morpholin-4-yl)propyl]urea)
Descriptor: 1,2-ETHANEDIOL, 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-[3-(morpholin-4-yl)propyl]urea, Cyclin-C, ...
Authors:Schneider, E.V, Boettcher, J, Huber, R, Maskos, K.
Deposit date:2012-05-15
Release date:2013-05-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-kinetic relationship study of CDK8/CycC specific compounds.
Proc.Natl.Acad.Sci.USA, 110, 2013

243531

數據於2025-10-22公開中

PDB statisticsPDBj update infoContact PDBjnumon