Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8X1H
DownloadVisualize
BU of 8x1h by Molmil
Crystal structure of N-terminal domain of Nucleocapsid protein of SARS-CoV-2
Descriptor: GLYCEROL, Nucleoprotein
Authors:Kumari, S, Gupta, G.D.
Deposit date:2023-11-07
Release date:2023-11-22
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Unveiling potential inhibitors targeting the nucleocapsid protein of SARS-CoV-2: Structural insights into their binding sites.
Int.J.Biol.Macromol., 273, 2024
8X3H
DownloadVisualize
BU of 8x3h by Molmil
Crystal structure of iron-bound recombinant ovotransferrin N-lobe at 0.93 angstrom resolution
Descriptor: CARBONATE ION, FE (III) ION, GLYCEROL, ...
Authors:Toyoda, M, Mikami, B, Mizutani, K.
Deposit date:2023-11-13
Release date:2023-12-13
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Crystal structure of iron-bound ovotransferrin N-lobe at atomic resolution
To Be Published
6FUP
DownloadVisualize
BU of 6fup by Molmil
F11 T-Cell Receptor Recognising PKYVKQNTLKLAT Peptide Presented by HLA-DR*0101
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-27
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
6LW8
DownloadVisualize
BU of 6lw8 by Molmil
Structural basis for domain rotation during adenylation of active site K123 and fragment library screening against NAD+ -dependent DNA ligase from Mycobacterium tuberculosis
Descriptor: (4R)-4-(4-fluorophenyl)-4,5,6,7-tetrahydro-1H-imidazo[4,5-c]pyridine, DNA ligase A, GLYCEROL, ...
Authors:Ramachandran, R, Afsar, M, Shukla, A.
Deposit date:2020-02-07
Release date:2021-02-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Structure based identification of first-in-class fragment inhibitors that target the NMN pocket of M. tuberculosis NAD + -dependent DNA ligase A.
J.Struct.Biol., 213, 2021
5EWX
DownloadVisualize
BU of 5ewx by Molmil
Fusion protein of T4 lysozyme and B4 domain of protein A from staphylococcal aureus with chemical cross-linker EY-CBS
Descriptor: 2,2'-ethyne-1,2-diylbis{5-[(chloroacetyl)amino]benzenesulfonic acid}, Endolysin,Immunoglobulin G-binding protein A,Endolysin
Authors:Jeong, W.H, Lee, H, Song, D.H, Lee, J.O.
Deposit date:2015-11-22
Release date:2016-03-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Connecting two proteins using a fusion alpha helix stabilized by a chemical cross linker.
Nat Commun, 7, 2016
6FYE
DownloadVisualize
BU of 6fye by Molmil
The crystal structure of EncM H138T mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-03-11
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6PT7
DownloadVisualize
BU of 6pt7 by Molmil
Structure of KatE1 catalase from Acinetobacter sp. Ver3
Descriptor: CHLORIDE ION, Catalase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Gonzalez, J.M, Sartorio, M.G, Cortez, N.
Deposit date:2019-07-15
Release date:2020-07-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and functional properties of the cold-adapted catalase from Acinetobacter sp. Ver3 native to the Atacama plateau in northern Argentina
Acta Crystallogr.,Sect.D, D77, 2021
6PT9
DownloadVisualize
BU of 6pt9 by Molmil
Crystal structure of PsS1_NC C84S in complex with k-neocarrabiose
Descriptor: 1,2-ETHANEDIOL, 3,6-anhydro-D-galactose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Hettle, A.G, Boraston, A.B.
Deposit date:2019-07-15
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Commun Biol, 2, 2019
6LZZ
DownloadVisualize
BU of 6lzz by Molmil
Crystal structure of the PDE9 catalytic domain in complex with inhibitor 4a
Descriptor: 1-cyclopentyl-6-[[(2R)-1-(2-oxa-6-azaspiro[3.3]heptan-6-yl)-1-oxidanylidene-propan-2-yl]amino]-5H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Huang, Y.Y, Wu, Y, Luo, H.B.
Deposit date:2020-02-19
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.40003753 Å)
Cite:Identification of phosphodiesterase-9 as a novel target for pulmonary arterial hypertension by using highly selective and orally bioavailable inhibitors
To Be Published
6PZ4
DownloadVisualize
BU of 6pz4 by Molmil
co-crystal structure of BACE with inhibitor AM-6494
Descriptor: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
Authors:Huang, X.
Deposit date:2019-07-31
Release date:2019-10-23
Last modified:2020-03-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery of AM-6494: A Potent and Orally Efficacious beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitor with in Vivo Selectivity over BACE2.
J.Med.Chem., 63, 2020
6PSL
DownloadVisualize
BU of 6psl by Molmil
Structure of a N-Me-D-Gln4,D-aza-Thr8,Arg10-teixobactin analogue
Descriptor: CHLORIDE ION, teixobactin analogue
Authors:Nowick, J.S, Yang, H, Pishenko, A, Li, X.
Deposit date:2019-07-12
Release date:2019-11-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Design, Synthesis, and Study of Lactam and Ring-Expanded Analogues of Teixobactin.
J.Org.Chem., 85, 2020
6FNS
DownloadVisualize
BU of 6fns by Molmil
Ergothioneine-biosynthetic methyltransferase EgtD in complex with morpholinohistidine
Descriptor: GLYCEROL, Histidine N-alpha-methyltransferase, Morpholinohistidine
Authors:Vit, A, Blankenfeldt, W, Seebeck, F.P.
Deposit date:2018-02-05
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Inhibition and Regulation of the Ergothioneine Biosynthetic Methyltransferase EgtD.
ACS Chem. Biol., 13, 2018
6GEB
DownloadVisualize
BU of 6geb by Molmil
X-ray structure of the Legionella pneumophila ATPase DotB
Descriptor: DotB, PHOSPHATE ION
Authors:Prevost, M.S, Waksman, G.
Deposit date:2018-04-26
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:X-ray crystal structures of the type IVb secretion system DotB ATPases.
Protein Sci., 27, 2018
5EX2
DownloadVisualize
BU of 5ex2 by Molmil
Crystal structure of cyclophilin AquaCyp293 from Hirschia baltica
Descriptor: CALCIUM ION, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Jakob, R.P, Maier, T.
Deposit date:2015-11-23
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.294 Å)
Cite:Structural and Functional Characterization of a Novel Family of Cyclophilins, the AquaCyps.
Plos One, 11, 2016
4TRJ
DownloadVisualize
BU of 4trj by Molmil
Crystal structure of Mycobacterium tuberculosis enoyl reductase (INHA) complexed with N-(3-bromophenyl)-1-cyclohexyl-5-oxopyrrolidine-3-carboxamide, refined with new ligand restraints
Descriptor: (3S)-N-(3-BROMOPHENYL)-1-CYCLOHEXYL-5-OXOPYRROLIDINE-3-CARBOXAMIDE, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:He, X, Alian, A, Stroud, R.M, Ortiz de Montellano, P.R.
Deposit date:2014-06-17
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Pyrrolidine carboxamides as a novel class of inhibitors of enoyl acyl carrier protein reductase from Mycobacterium tuberculosis
J. Med. Chem., 2006
7YPL
DownloadVisualize
BU of 7ypl by Molmil
Crystal structure of fibronectin type III domain variant, a VEGFR2-specific antagonist
Descriptor: Fibronectin, SULFATE ION
Authors:Chang, Y.T, Chen, C.Y, Chuang, W.J.
Deposit date:2022-08-03
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:A Novel Disulfide Bond Engineering of Fibronectin Type III Domain Enhances Thermostability and Solubility of VEGFR2-Specific Antagonist
To Be Published
6FYF
DownloadVisualize
BU of 6fyf by Molmil
The crystal structure of EncM V135M mutant
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative FAD-dependent oxygenase EncM
Authors:Saleem-Batcha, R, Teufel, R.
Deposit date:2018-03-11
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6Q23
DownloadVisualize
BU of 6q23 by Molmil
Crystal structure of human 1G01 Fab in complex with influenza virus neuraminidase from A/California/04/2009 (H1N1)
Descriptor: 1G01 Fab IgG1 heavy chain, 1G01 Fab kappa light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhu, X, Wilson, I.A.
Deposit date:2019-08-06
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Broadly protective human antibodies that target the active site of influenza virus neuraminidase.
Science, 366, 2019
8Y4U
DownloadVisualize
BU of 8y4u by Molmil
Crystal structure of a His1 from oryza sativa
Descriptor: FE (III) ION, Fe(II)/2-oxoglutarate-dependent oxygenase
Authors:Wang, N, Ma, J.M, Shibing, H, Beibei, Y, He, Z, Dandan, L.
Deposit date:2024-01-30
Release date:2024-02-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of HPPD inhibitor sensitive protein from Oryza sativa.
Biochem.Biophys.Res.Commun., 704, 2024
8Y9A
DownloadVisualize
BU of 8y9a by Molmil
The Crystal Structure of USP8 from Biortus.
Descriptor: Ubiquitin carboxyl-terminal hydrolase 8
Authors:Wang, F, Cheng, W, Lv, Z, Ju, C, Bao, C.
Deposit date:2024-02-06
Release date:2024-03-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The Crystal Structure of USP8 from Biortus.
To Be Published
5F6M
DownloadVisualize
BU of 5f6m by Molmil
Isotropic Trypsin Model for Comparison of Diffuse Scattering
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Van Benschoten, A.H, Wall, M.E, Fraser, J.S.
Deposit date:2015-12-06
Release date:2016-01-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Measuring and modeling diffuse scattering in protein X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 113, 2016
7YRA
DownloadVisualize
BU of 7yra by Molmil
Crystal structure of [2Fe-2S]-TtPetA
Descriptor: CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, ...
Authors:Tsutsumi, E, Niwa, S, Takeda, K.
Deposit date:2022-08-09
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride.
Commun Chem, 6, 2023
7YR9
DownloadVisualize
BU of 7yr9 by Molmil
Crystal structure of the immature form of TtPetA
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Tsutsumi, E, Niwa, S, Takeda, K.
Deposit date:2022-08-09
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a putative immature form of a Rieske-type iron-sulfur protein in complex with zinc chloride.
Commun Chem, 6, 2023
6M0Y
DownloadVisualize
BU of 6m0y by Molmil
KR-12 analog derived from human LL-37
Descriptor: LYS-ARG-ILE-VAL-LYS-ARG-ILE-LYS-LYS-TRP-LEU-ARG
Authors:Yun, H, Min, H.J, Lee, C.W.
Deposit date:2020-02-24
Release date:2021-02-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure and Bactericidal Activity of KR-12 Analog Derived from Human LL-37 as a Potential Cosmetic Preservative
To Be Published
6GEF
DownloadVisualize
BU of 6gef by Molmil
X-ray structure of the Yersinia pseudotuberculosis ATPase DotB
Descriptor: Type IV secretion system protein DotB
Authors:Prevost, M.S, Waksman, G.
Deposit date:2018-04-26
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:X-ray crystal structures of the type IVb secretion system DotB ATPases.
Protein Sci., 27, 2018

225681

數據於2024-10-02公開中

PDB statisticsPDBj update infoContact PDBjnumon