PDB: 221051 resultsInfo pagesStatus searchChemie searchBIRD

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8X8V	Crystal structure of Cypovirus Polyhedra mutant fused with c-Myc fragment Descriptor: Polyhedrin,Myc proto-oncogene protein Authors: Kojima, M, Ueno, T, Abe, S, Hirata, K. Deposit date: 2023-11-29 Release date: 2024-06-05 Method: X-RAY DIFFRACTION (2 Å) Cite: Screening system for structure determination of intrinsically disordered protein using cell-free protein crystallization To Be Published
9B5O	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 10 map and model from consensus Descriptor: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3.19 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
8Y6U	Cryo-EM structure of E.coli transcription initiation complex with transcription factor GcvA Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Lin, W, Shi, J. Deposit date: 2024-02-03 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3.97 Å) Cite: NMR analysis of a loop-bulge structure of UUCGA pentaloop. Biochem.Biophys.Res.Commun., 691, 2024
9B5Q	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - cluster 2 map and model (ATP/Mg) Descriptor: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (2.95 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
9BVS	NMR structure of TLP-1 in solution Descriptor: Temporin-1Tl Authors: Jia, R, McShan, A.C. Deposit date: 2024-05-20 Release date: 2024-06-05 Method: SOLUTION NMR Cite: Design and Development of Temporin L Analogues to Inhibit the Main Protease of SARS-CoV-2 To Be Published
8YUA	Tubulin-RB3-TTL in complex with compound SI10 Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-chloranyl-~{N}-(4-methoxyphenyl)-~{N}-methyl-thieno[3,2-d]pyrimidin-4-amine, CALCIUM ION, ... Authors: Wu, C.Y, Wang, Y.X. Deposit date: 2024-03-27 Release date: 2024-06-05 Method: X-RAY DIFFRACTION (2.37 Å) Cite: The complex structure of tubulin-RB3-TTL in complex with compound SI10 To Be Published
8YXM	Structure of N-terminal domain of L protein bound with Phosphoprotein from Mumps Virus Descriptor: Phosphoprotein, RNA-directed RNA polymerase L, ZINC ION Authors: Li, T.H, Shen, Q.T. Deposit date: 2024-04-02 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (2.93 Å) Cite: Structures of the mumps virus polymerase complex via cryo-electron microscopy. Nat Commun, 15, 2024
9B5S	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - cluster 4 map and model (ATP/Mg) Descriptor: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (2.96 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
9B5D	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 1 map and model from consensus Descriptor: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, Large ribosomal subunit protein eL40B, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
9B5H	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 3 map and model (Ub(A)-AMP/PPi/Mg) Descriptor: 4-aminobutanenitrile, ADENOSINE MONOPHOSPHATE, Large ribosomal subunit protein eL40B, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (2.69 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
9B5X	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 10 map and model from cluster 5 (ATP/Mg) Descriptor: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (4.16 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
9B5U	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 1 map and model from cluster 1 (ATP/Mg) Descriptor: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3.67 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
8XUP	Crystal structure of lipoprotein NlpI in complex with MepS Descriptor: Lipoprotein NlpI, Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase Authors: Tzeng, S.R, Wang, S, Huang, C.H. Deposit date: 2024-01-13 Release date: 2024-06-05 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal structure of lipoprotein NlpI in complex with MepS To Be Published
9F3D	Single acyclic phosphonate nucleotide (S)-ZNA modification on DNA hairpin Descriptor: C modifed (S)-ZNA Authors: Li, X, Groaz, E, Herdewijn, P, Lescrinier, E. Deposit date: 2024-04-25 Release date: 2024-06-05 Method: SOLUTION NMR Cite: Impact of Single Acyclic Phosphonate Nucleotide (ZNA) Modifications on DNA Duplex Stability. Chemistry, 2024
8XAU	Cryo-EM structure of HerA Descriptor: ATP-binding protein Authors: Wang, Y, Deng, Z. Deposit date: 2023-12-05 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3.14 Å) Cite: Cryo-EM structure of HerA To Be Published
8YU9	Tubulin-RB3-TTL in complex with compound SI10 Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-chloranylthieno[3,2-d]pyrimidin-4-yl)-7-methoxy-1,3-dihydroquinoxalin-2-one, CALCIUM ION, ... Authors: Wu, C.Y, Wang, Y.X. Deposit date: 2024-03-27 Release date: 2024-06-05 Method: X-RAY DIFFRACTION (3.25 Å) Cite: The crystal structure of tubulin-RB3-TTL in complex with compound AB10 To Be Published
8YZ5	SARS-CoV-2 Delta Spike in complex with Fab of JE-5C Descriptor: Fab heavy chain of JE-5C, Fab light chain of JE-5C, Spike glycoprotein Authors: Chen, X, Wu, Y.-M. Deposit date: 2024-04-06 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3.93 Å) Cite: The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine Plos Pathog., 2024
9BB2	Backbone Modification in the GA Module of Protein PAB: beta3-residues at positions 20 and 24 Descriptor: Peptostreptococcal albumin-binding protein Authors: Lin, Y, Horne, W.S. Deposit date: 2024-04-05 Release date: 2024-06-05 Method: SOLUTION NMR Cite: Backbone Modification in a Protein Hydrophobic Core. Chemistry, 2024
8XKL	Structure of ACPII-CCPII from cryptophyte algae Descriptor: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol, (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol, (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol, ... Authors: Li, X.Y, Mao, Z.Y, Shen, J.R, Han, G.Y. Deposit date: 2023-12-23 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (2.84 Å) Cite: Structure and distinct supramolecular organization of a PSII-ACPII dimer from a cryptophyte alga Chroomonas placoidea. Nat Commun, 15, 2024
9B57	Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 3 Descriptor: 4-aminobutanenitrile, E3 ubiquitin-protein ligase pub2, Ubiquitin, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3.37 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
9BB1	Backbone Modification in the GA Module of Protein PAB: Wild-type Sequence Descriptor: Peptostreptococcal albumin-binding protein Authors: Lin, Y, Horne, W.S. Deposit date: 2024-04-05 Release date: 2024-06-05 Method: SOLUTION NMR Cite: Backbone Modification in a Protein Hydrophobic Core. Chemistry, 2024
8YTX	Tubulin-RB3-TTL in complex with compound SI9 Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-chloranyl-~{N}-(4-methoxyphenyl)-~{N}-methyl-thieno[2,3-d]pyrimidin-4-amine, CALCIUM ION, ... Authors: Wu, C.Y, Wang, Y.X. Deposit date: 2024-03-26 Release date: 2024-06-05 Method: X-RAY DIFFRACTION (2.53 Å) Cite: Tubulin-RB3-TTL in complex with compound SI9 To Be Published
9B5K	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 1 map and model from cluster 1 (Ub(A)/ATP/Mg) Descriptor: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, Large ribosomal subunit protein eL40B, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3.16 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
8YUV	Cryo-EM structure of the immepip-bound H3R-Gi complex Descriptor: 4-(1H-imidazol-5-ylmethyl)piperidine, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... Authors: Shen, Q, Tang, X, Wen, X, Cheng, S, Xiao, P, Zang, S, Shen, D, Jiang, L, Zheng, Y, Zhang, H, Xu, H, Mao, C, Zhang, M, Hu, W, Sun, J, Chen, Z, Zhang, Y. Deposit date: 2024-03-27 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3 Å) Cite: Molecular Determinant Underlying Selective Coupling of Primary G-Protein by Class A GPCRs. Adv Sci, 2024
8ZJF	Cryo-EM structure of human integrin alpha-E beta-7 Descriptor: CALCIUM ION, Integrin alpha-E, Integrin beta-7, ... Authors: Akasaka, H, Nureki, O, Kise, Y. Deposit date: 2024-05-14 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Cryo-EM structure of I domain-containing integrin alpha E beta 7. Biochem.Biophys.Res.Commun., 721, 2024

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