Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GUL
DownloadVisualize
BU of 5gul by Molmil
Crystal structure of Tris/PPix2/Mg2+ bound form of cyclolavandulyl diphosphate synthase (CLDS) from Streptomyces sp. CL190
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cyclolavandulyl diphosphate synthase, MAGNESIUM ION, ...
Authors:Tomita, T, Kobayashi, M, Nishiyama, M, Kuzuyama, T.
Deposit date:2016-08-29
Release date:2017-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structure and Mechanism of the Monoterpene Cyclolavandulyl Diphosphate Synthase that Catalyzes Consecutive Condensation and Cyclization.
Angew. Chem. Int. Ed. Engl., 56, 2017
4C12
DownloadVisualize
BU of 4c12 by Molmil
X-ray Crystal Structure of Staphylococcus aureus MurE with UDP-MurNAc- Ala-Glu-Lys and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Fulop, V, Roper, D.I, Ruane, K.M, Barreteau, H, Boniface, A, Dementin, S, Blanot, D, Mengin-Lecreulx, D, Gobec, S, Dessen, A, Dowson, C.G, Lloyd, A.J.
Deposit date:2013-08-09
Release date:2013-10-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Specificity Determinants for Lysine Incorporation in Staphylococcus Aureus Peptidoglycan as Revealed by the Structure of a Mure Enzyme Ternary Complex.
J.Biol.Chem., 288, 2013
4NML
DownloadVisualize
BU of 4nml by Molmil
2.60 Angstrom resolution crystal structure of putative ribose 5-phosphate isomerase from Toxoplasma gondii ME49 in complex with DL-Malic acid
Descriptor: CHLORIDE ION, D-MALATE, Ribulose 5-phosphate isomerase
Authors:Halavaty, A.S, Dubrovska, I, Flores, K, Shanmugam, D, Shuvalova, L, Roos, D, Ruan, J, Ngo, H, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-11-15
Release date:2013-12-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii .
Front Cell Infect Microbiol, 8, 2018
5VVK
DownloadVisualize
BU of 5vvk by Molmil
Cas1-Cas2 bound to full-site mimic
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (5'-D(*GP*AP*CP*CP*AP*CP*CP*AP*GP*TP*G)-3'), ...
Authors:Wright, A.V, Knott, G.J, Doxzen, K.D, Doudna, J.A.
Deposit date:2017-05-19
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of the CRISPR genome integration complex.
Science, 357, 2017
4NU7
DownloadVisualize
BU of 4nu7 by Molmil
2.05 Angstrom Crystal Structure of Ribulose-phosphate 3-epimerase from Toxoplasma gondii.
Descriptor: CHLORIDE ION, Ribulose-phosphate 3-epimerase, SULFATE ION, ...
Authors:Minasov, G, Ruan, J, Ngo, H, Shuvalova, L, Dubrovska, I, Flores, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-12-03
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii .
Front Cell Infect Microbiol, 8, 2018
5VVJ
DownloadVisualize
BU of 5vvj by Molmil
Cas1-Cas2 bound to half-site intermediate
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (112-MER), ...
Authors:Wright, A.V, Knott, G.J, Doxzen, K.W, Doudna, J.A.
Deposit date:2017-05-19
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.89 Å)
Cite:Structures of the CRISPR genome integration complex.
Science, 357, 2017
6FWY
DownloadVisualize
BU of 6fwy by Molmil
Thioester domain of the Enterococcus faecium TIE86 protein
Descriptor: B-type Cna protein, GLYCEROL, TETRAETHYLENE GLYCOL
Authors:Miller, O.K, Banfield, M.J, Schwarz-Linek, U.
Deposit date:2018-03-07
Release date:2018-08-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:A new structural class of bacterial thioester domains reveals a slipknot topology.
Protein Sci., 27, 2018
6FX6
DownloadVisualize
BU of 6fx6 by Molmil
Thioester domain of the Staphylococcus aureus TIE protein
Descriptor: ACETATE ION, SaTIE-TED, ZINC ION
Authors:Miller, O.K, Banfield, M.J, Schwarz-Linek, U.
Deposit date:2018-03-08
Release date:2018-08-08
Last modified:2019-01-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A new structural class of bacterial thioester domains reveals a slipknot topology.
Protein Sci., 27, 2018
6FWV
DownloadVisualize
BU of 6fwv by Molmil
The Bacillus anthracis TIE protein
Descriptor: Collagen Adhesion protein, ZINC ION
Authors:Miller, O.K, Banfield, M.J, Schwarz-Linek, U.
Deposit date:2018-03-07
Release date:2018-08-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:A new structural class of bacterial thioester domains reveals a slipknot topology.
Protein Sci., 27, 2018
5X2V
DownloadVisualize
BU of 5x2v by Molmil
Crystal structure of Pseudomonas putida methionine gamma-lyase wild type without sulfate ion
Descriptor: L-methionine gamma-lyase
Authors:Shiba, T, Sato, D, Harada, S.
Deposit date:2017-02-02
Release date:2017-04-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
5X2Y
DownloadVisualize
BU of 5x2y by Molmil
Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant without sulfate ion
Descriptor: L-methionine gamma-lyase
Authors:Shiba, T, Sato, D, Harada, S.
Deposit date:2017-02-02
Release date:2017-04-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
5X2W
DownloadVisualize
BU of 5x2w by Molmil
Crystal structure of Pseudomonas putida methionine gamma-lyase wild type with L-methionine intermediates
Descriptor: (2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-4-(methylsulfanyl)but-2-enoic acid, L-methionine gamma-lyase
Authors:Shiba, T, Sato, D, Harada, S.
Deposit date:2017-02-02
Release date:2017-04-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
5X2Z
DownloadVisualize
BU of 5x2z by Molmil
Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant with L-methionine intermediates
Descriptor: (2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-4-(methylsulfanyl)but-2-enoic acid, L-methionine gamma-lyase
Authors:Shiba, T, Sato, D, Harada, S.
Deposit date:2017-02-02
Release date:2017-04-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
1N1L
DownloadVisualize
BU of 1n1l by Molmil
CRYSTAL STRUCTURE OF HCV NS3 PROTEASE DOMAIN:NS4A PEPTIDE COMPLEX WITH COVALENTLY BOUND INHIBITOR (GW472467X)
Descriptor: HCV NS3 SERINE PROTEASE, NS4A COFACTOR, ZINC ION, ...
Authors:Andrews, D.M, Chaignot, H, Coomber, B.A, Good, A.C, Hind, S.L, Jones, P.S, Mill, G, Robinson, J.E, Skarzynski, T, Slater, M.J, Somers, D.O.N.
Deposit date:2002-10-18
Release date:2003-10-21
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Pyrrolidine-5,5-trans-lactams. 2. The use of X-ray Crystal Structure Data in the Optimisation of P3 and P4 Substituents
Org.Lett., 4, 2002
5X2X
DownloadVisualize
BU of 5x2x by Molmil
Crystal structure of Pseudomonas putida methionine gamma-lyase wild type with L-homocysteine intermediates
Descriptor: (2E)-2-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}but-2-enoic acid, HYDROSULFURIC ACID, L-methionine gamma-lyase
Authors:Shiba, T, Sato, D, Harada, S.
Deposit date:2017-02-02
Release date:2017-04-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
6EPA
DownloadVisualize
BU of 6epa by Molmil
Structure of dNCS-1 bound to the NCS-1/Ric8a protein/protein interaction regulator IGS-1.76
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, FI18190p1, ...
Authors:Sanchez-Barrena, M.J, Daniel, M, Infantes, L.
Deposit date:2017-10-11
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Deciphering the Inhibition of the Neuronal Calcium Sensor 1 and the Guanine Exchange Factor Ric8a with a Small Phenothiazine Molecule for the Rational Generation of Therapeutic Synapse Function Regulators.
J. Med. Chem., 61, 2018
4O0N
DownloadVisualize
BU of 4o0n by Molmil
2.4 Angstrom Resolution Crystal Structure of Putative Nucleoside Diphosphate Kinase from Toxoplasma gondii.
Descriptor: Nucleoside diphosphate kinase, SULFATE ION
Authors:Minasov, G, Ruan, J, Ngo, H, Shuvalova, L, Dubrovska, I, Flores, K, Shanmugam, D, Roos, D, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-12-13
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii .
Front Cell Infect Microbiol, 8, 2018
4ODI
DownloadVisualize
BU of 4odi by Molmil
2.6 Angstrom Crystal Structure of Putative Phosphoglycerate Mutase 1 from Toxoplasma gondii
Descriptor: Phosphoglycerate mutase PGMII, SODIUM ION
Authors:Minasov, G, Ruan, J, Ngo, H, Shuvalova, L, Dubrovska, I, Flores, K, Shanmugam, D, Roos, D, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-01-10
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii .
Front Cell Infect Microbiol, 8, 2018
4MTC
DownloadVisualize
BU of 4mtc by Molmil
Crystal structure of human C53A DJ-1
Descriptor: 1,2-ETHANEDIOL, Protein DJ-1
Authors:Cendron, L, Girotto, S, Bisaglia, M, Tessari, I, Mammi, S, Zanotti, G, Bubacco, L.
Deposit date:2013-09-19
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:DJ-1 Is a Copper Chaperone Acting on SOD1 Activation.
J.Biol.Chem., 289, 2014
4N12
DownloadVisualize
BU of 4n12 by Molmil
Crystal structure of human E18D DJ-1 in complex with Cu
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, Protein DJ-1
Authors:Cendron, L, Girotto, S, Bisaglia, M, Tessari, I, Mammi, S, Zanotti, G, Bubacco, L.
Deposit date:2013-10-03
Release date:2014-03-05
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (1.478 Å)
Cite:DJ-1 Is a Copper Chaperone Acting on SOD1 Activation.
J.Biol.Chem., 289, 2014
7Z10
DownloadVisualize
BU of 7z10 by Molmil
Monomeric respiratory complex IV isolated from S. cerevisiae
Descriptor: COPPER (II) ION, CYTOCHROME C OXIDASE SUBUNIT 3; SYNONYM: CYTOCHROME C OXIDASE POLYPEPTIDE III, COX3, ...
Authors:Marechal, A, Hartley, A, Ing, G, Pinotsis, N.
Deposit date:2022-02-24
Release date:2022-08-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Cryo-EM structure of a monomeric yeast S. cerevisiae complex IV isolated with maltosides: Implications in supercomplex formation.
Biochim Biophys Acta Bioenerg, 1863, 2022
4OZ7
DownloadVisualize
BU of 4oz7 by Molmil
Methanobactin production by methanotrophic bacteria and their structural diversity from Methylosinus strains: Insights into copper release
Descriptor: COPPER (I) ION, Methanobactin
Authors:El Ghazouani, A, Basle, A, Dennison, C.
Deposit date:2014-02-14
Release date:2015-05-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Methanobactin production by methanotrophic bacteria and their structural diversity from Methylosinus strains: Insights into copper release
To Be Published
7Z3C
DownloadVisualize
BU of 7z3c by Molmil
Solution structure of GltJ GYF domain from Myxococcus xanthus
Descriptor: Adventurous gliding motility protein X
Authors:Attia, B, My, L, Castaing, J.P, Le Guenno, H, Espinosa, L, Schmidt, V, Nouailler, M, Bornet, O, Elantak, L, Mignot, T.
Deposit date:2022-03-02
Release date:2023-02-22
Last modified:2024-09-04
Method:SOLUTION NMR
Cite:A molecular switch controls assembly of bacterial focal adhesions.
Sci Adv, 10, 2024
1ZOG
DownloadVisualize
BU of 1zog by Molmil
Crystal structure of protein kinase CK2 in complex with TBB-derivatives
Descriptor: 4,5,6,7-TETRABROMO-2-(METHYLSULFANYL)-1H-BENZIMIDAZOLE, PROTEIN KINASE CK2, alpha SUBUNIT
Authors:Battistutta, R, Mazzorana, M, Sarno, S, Kazimierczuk, Z, Zanotti, G, Pinna, L.A.
Deposit date:2005-05-13
Release date:2005-11-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Inspecting the structure-activity relationship of protein kinase CK2 inhibitors derived from tetrabromo-benzimidazole.
Chem.Biol., 12, 2005
8W1D
DownloadVisualize
BU of 8w1d by Molmil
CRYSTAL STRUCTURE OF DPS-LIKE PROTEIN PA4880 FROM PSEUDOMONAS AERUGINOSA (DIMERIC FORM)
Descriptor: DPS-LIKE PROTEIN, FE (II) ION
Authors:Lovell, S, Battaile, K.P, Rivera, M.
Deposit date:2024-02-15
Release date:2024-05-29
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Pseudomonas aeruginosa gene PA4880 encodes a Dps-like protein with a Dps fold, bacterioferritin-type ferroxidase centers, and endonuclease activity.
Front Mol Biosci, 11, 2024

226262

數據於2024-10-16公開中

PDB statisticsPDBj update infoContact PDBjnumon