Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4PNM
DownloadVisualize
BU of 4pnm by Molmil
Crystal Structure of human Tankyrase 2 in complex with Nu1025.
Descriptor: 1,2-ETHANEDIOL, 8-HYDROXY-2-METHYL-3-HYDRO-QUINAZOLIN-4-ONE, Tankyrase-2, ...
Authors:Qiu, W, Lam, R, Romanov, V, Gordon, R, Gebremeskel, S, Vodsedalek, J, Thompson, C, Beletskaya, I, Battaile, K.P, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-05-23
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Insights into the binding of PARP inhibitors to the catalytic domain of human tankyrase-2.
Acta Crystallogr.,Sect.D, 70, 2014
4PNT
DownloadVisualize
BU of 4pnt by Molmil
Crystal Structure of human Tankyrase 2 in complex with 1,5-IQD.
Descriptor: 5-hydroxyisoquinolin-1(4H)-one, Tankyrase-2, ZINC ION
Authors:Qiu, W, Lam, R, Romanov, V, Gordon, R, Gebremeskel, S, Vodsedalek, J, Thompson, C, Beletskaya, I, Battaile, K.P, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-05-25
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Insights into the binding of PARP inhibitors to the catalytic domain of human tankyrase-2.
Acta Crystallogr.,Sect.D, 70, 2014
3BT3
DownloadVisualize
BU of 3bt3 by Molmil
Crystal structure of a glyoxalase-related enzyme from Clostridium phytofermentans
Descriptor: Glyoxalase-related enzyme, AraC type
Authors:Rao, K.N, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-27
Release date:2008-03-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a glyoxalase-related enzyme from Clostridium phytofermentans.
To be Published
1YJ9
DownloadVisualize
BU of 1yj9 by Molmil
Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22
Descriptor: 23S Ribosomal RNA, 50S RIBOSOMAL PROTEIN L10E, 50S RIBOSOMAL PROTEIN L11P, ...
Authors:Tu, D, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2005-01-13
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of MLSBK antibiotics bound to mutated large ribosomal subunits provide a structural explanation for resistance.
Cell(Cambridge,Mass.), 121, 2005
1YM8
DownloadVisualize
BU of 1ym8 by Molmil
crystal structure of GZZ shows up puckering of the proline ring in the Xaa position.
Descriptor: collagen gly-4(R)hyp-4(R)hyp
Authors:Schumacher, M.A, Mizuno, K, Bachinger, H.P.
Deposit date:2005-01-20
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The crystal structure of the collagen-like polypeptide (glycyl-4(R)-hydroxyprolyl-4(R)-hydroxyprolyl)9 at 1.55 A resolution shows up-puckering of the proline ring in the Xaa position.
J.Biol.Chem., 280, 2005
1ZAI
DownloadVisualize
BU of 1zai by Molmil
Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from rabbit muscle
Descriptor: 1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM), Fructose-bisphosphate aldolase A
Authors:St-Jean, M, Lafrance-Vanasse, J, Liotard, B, Sygusch, J.
Deposit date:2005-04-06
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:High Resolution Reaction Intermediates of Rabbit Muscle Fructose-1,6-bisphosphate Aldolase: substrate cleavage and induced fit.
J.Biol.Chem., 280, 2005
1ZCH
DownloadVisualize
BU of 1zch by Molmil
Structure of the hypothetical oxidoreductase YcnD from Bacillus subtilis
Descriptor: CALCIUM ION, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Morokutti, A, Lyskowski, A, Sollner, S, Pointner, E, Fitzpatrick, T.B, Kratky, C, Gruber, K, Macheroux, P.
Deposit date:2005-04-12
Release date:2005-11-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and Function of YcnD from Bacillus subtilis, a Flavin-Containing Oxidoreductase(,).
Biochemistry, 44, 2005
1ZFV
DownloadVisualize
BU of 1zfv by Molmil
The structure of an all-RNA minimal Hairpin Ribozyme with Mutation G8A at the cleavage site
Descriptor: 5'-R(*CP*GP*GP*UP*GP*AP*AP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*AP*GP*UP*CP*CP*AP*CP*CP*G)-3', ...
Authors:Wedekind, J.E.
Deposit date:2005-04-20
Release date:2006-02-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer.
Biochemistry, 45, 2006
1BFM
DownloadVisualize
BU of 1bfm by Molmil
HISTONE B FROM METHANOTHERMUS FERVIDUS
Descriptor: HISTONE B
Authors:Starich, M.R, Sandman, K, Reeve, J.N, Summers, M.F.
Deposit date:1995-09-28
Release date:1996-01-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of HMfB from the hyperthermophile, Methanothermus fervidus, confirms that this archaeal protein is a histone.
J.Mol.Biol., 255, 1996
1X9K
DownloadVisualize
BU of 1x9k by Molmil
An all-RNA Hairpin Ribozyme with mutation U39C
Descriptor: 5'-R(*AP*AP*UP*AP*GP*AP*GP*AP*AP*GP*CP*GP*A)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*GP*CP*AP*GP*UP*CP*CP*UP*AP*UP*U)-3', ...
Authors:Alam, S, Grum-Tokars, V, Krucinska, J, Kundracik, M.L, Wedekind, J.E.
Deposit date:2004-08-21
Release date:2005-11-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Conformational Heterogeneity at Position U37 of an All-RNA Hairpin Ribozyme with Implications for Metal Binding and the Catalytic Structure of the S-Turn.
Biochemistry, 44, 2005
1XFP
DownloadVisualize
BU of 1xfp by Molmil
Crystal structure of the CDR2 germline reversion mutant of cAb-Lys3 in complex with hen egg white lysozyme
Descriptor: FORMIC ACID, Lysozyme C, heavy chain antibody
Authors:De Genst, E, Handelberg, F, Van Meirhaeghe, A, Vynck, S, Loris, R, Wyns, L, Muyldermans, S.
Deposit date:2004-09-15
Release date:2004-09-28
Last modified:2013-02-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Chemical Basis for the Affinity Maturation of a Camel Single Domain Antibody
J.Biol.Chem., 279, 2004
1XGI
DownloadVisualize
BU of 1xgi by Molmil
AmpC beta-lactamase in complex with 3-(3-nitro-phenylsulfamoyl)-thiophene-2-carboxylic acid
Descriptor: 3-{[(3-NITROANILINE]SULFONYL}THIOPHENE-2-CARBOXYLIC ACID, Beta-lactamase
Authors:Tondi, D, Morandi, F, Bonnet, R, Costi, M.P, Shoichet, B.K.
Deposit date:2004-09-17
Release date:2005-05-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure-based optimization of a non-beta-lactam lead results in inhibitors that do not up-regulate beta-lactamase expression in cell culture.
J.Am.Chem.Soc., 127, 2005
2B57
DownloadVisualize
BU of 2b57 by Molmil
Guanine Riboswitch C74U mutant bound to 2,6-diaminopurine
Descriptor: 65-MER, 9H-PURINE-2,6-DIAMINE, ACETATE ION, ...
Authors:Gilbert, S.D, Stoddard, C.D, Wise, S.J, Batey, R.T.
Deposit date:2005-09-27
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Thermodynamic and kinetic characterization of ligand binding to the purine riboswitch aptamer domain.
J.Mol.Biol., 359, 2006
3CLK
DownloadVisualize
BU of 3clk by Molmil
Crystal structure of a transcription regulator from Lactobacillus plantarum
Descriptor: GLYCEROL, Transcription regulator
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-03-19
Release date:2008-04-01
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystal structure of a transcription regulator from lactobacillus plantarum.
To be Published
2B6A
DownloadVisualize
BU of 2b6a by Molmil
Crystal structure of HIV-1 reverse transcriptase (RT) in complex with THR-50
Descriptor: 1-(2,6-DIFLUOROBENZYL)-2-(2,6-DIFLUOROPHENYL)-4-METHYL-1H-BENZIMIDAZOLE, Reverse transcriptase p51 subunit, Reverse transcriptase p66 subunit
Authors:Morningstar, M.L, Roth, T, Smith, M.K, Zajac, M, Watson, K, Buckheit, R.W, Das, K, Zhang, W, Arnold, E, Michejda, C.J.
Deposit date:2005-09-30
Release date:2005-11-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of HIV-1 reverse transcriptase (RT) in complex with THR-50
TO BE PUBLISHED
2ALM
DownloadVisualize
BU of 2alm by Molmil
Crystal structure analysis of a mutant beta-ketoacyl-[acyl carrier protein] synthase II from Streptococcus pneumoniae
Descriptor: 3-oxoacyl-(acyl-carrier-protein) synthase II, MAGNESIUM ION
Authors:Zhang, Y.M, Hurlbert, J, White, S.W, Rock, C.O.
Deposit date:2005-08-07
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Roles of the active site water, histidine 303, and phenylalanine 396 in the catalytic mechanism of the elongation condensing enzyme of Streptococcus pneumoniae.
J.Biol.Chem., 281, 2006
3CS3
DownloadVisualize
BU of 3cs3 by Molmil
Crystal structure of sugar-binding transcriptional regulator (LacI family) from Enterococcus faecalis
Descriptor: GLYCEROL, SULFATE ION, Sugar-binding transcriptional regulator, ...
Authors:Patskovsky, Y, Romero, R, Freeman, J, Iizuka, M, Groshong, C, Smith, D, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-04-08
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of sugar-binding transcriptional regulator (LacI family) from Enterococcus faecalis.
To be Published
2B3J
DownloadVisualize
BU of 2b3j by Molmil
Crystal Structure of Staphylococcus aureus tRNA Adenosine Deaminase, TadA, in Complex with RNA
Descriptor: GLYCEROL, ZINC ION, anticodon stem-loop of t-RNA-Arg2 (nucleotides 27-42), ...
Authors:Losey, H.C, Ruthenburg, A.J, Verdine, G.L.
Deposit date:2005-09-20
Release date:2006-01-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Staphylococcus aureus tRNA adenosine deaminase TadA in complex with RNA.
Nat.Struct.Mol.Biol., 13, 2006
4TWI
DownloadVisualize
BU of 4twi by Molmil
The structure of Sir2Af1 bound to a succinylated histone peptide
Descriptor: GLYCEROL, NAD-dependent protein deacylase 1, Succinylated H4 Peptide (aa8-20), ...
Authors:Ringel, A.E, Roman, C, Wolberger, C.
Deposit date:2014-06-30
Release date:2014-12-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Alternate deacylating specificities of the archaeal sirtuins Sir2Af1 and Sir2Af2.
Protein Sci., 23, 2014
2BBF
DownloadVisualize
BU of 2bbf by Molmil
Crystal structure of tRNA-guanine transglycosylase (TGT) from Zymomonas mobilis in complex with 6-amino-3,7-dihydro-imidazo[4,5-g]quinazolin-8-one
Descriptor: 6-AMINO-3,7-DIHYDRO-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE, ZINC ION, tRNA guanine transglycosylase
Authors:Stengl, B, Meyer, E.A, Heine, A, Brenk, R, Diederich, F, Klebe, G.
Deposit date:2005-10-17
Release date:2007-04-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of tRNA-guanine transglycosylase (TGT) in complex with novel and potent inhibitors unravel pronounced induced-fit adaptations and suggest dimer formation upon substrate binding.
J.Mol.Biol., 370, 2007
2Z4J
DownloadVisualize
BU of 2z4j by Molmil
Crystal structure of AR LBD with SHP peptide NR Box 2
Descriptor: 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, Nuclear receptor 0B2
Authors:Jouravel, N, Fletterick, R.J.
Deposit date:2007-06-19
Release date:2007-12-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Interaction between the androgen receptor and a segment of its corepressor SHP
Acta Crystallogr.,Sect.D, 63, 2007
4TJW
DownloadVisualize
BU of 4tjw by Molmil
Crystal Structure of human Tankyrase 2 in complex with PJ-34.
Descriptor: N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE, Tankyrase-2, ZINC ION
Authors:Qiu, W, Lam, R, Romanov, V, Gordon, R, Gebremeskel, S, Vodsedalek, J, Thompson, C, Beletskaya, I, Battaile, K.P, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-05-25
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Insights into the binding of PARP inhibitors to the catalytic domain of human tankyrase-2.
Acta Crystallogr.,Sect.D, 70, 2014
4TKG
DownloadVisualize
BU of 4tkg by Molmil
Crystal Structure of human Tankyrase 2 in complex with AZD2281.
Descriptor: 4-(3-{[4-(cyclopropylcarbonyl)piperazin-1-yl]carbonyl}-4-fluorobenzyl)phthalazin-1(2H)-one, GLYCEROL, Tankyrase-2, ...
Authors:Qiu, W, Lam, R, Romanov, V, Gordon, R, Gebremeskel, S, Vodsedalek, J, Thompson, C, Beletskaya, I, Battaile, K.P, Pai, E.F, Chirgadze, N.Y.
Deposit date:2014-05-26
Release date:2014-10-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Insights into the binding of PARP inhibitors to the catalytic domain of human tankyrase-2.
Acta Crystallogr.,Sect.D, 70, 2014
4TN8
DownloadVisualize
BU of 4tn8 by Molmil
Crystal structure of Thermus Thermophilus thioredoxin solved by sulfur SAD using Swiss Light Source data
Descriptor: CHLORIDE ION, Thioredoxin
Authors:Weinert, T, Waltersperger, S, Olieric, V, Panepucci, E, Chen, L, Rose, J.P, Wang, M, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2014-06-03
Release date:2014-12-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Fast native-SAD phasing for routine macromolecular structure determination.
Nat.Methods, 12, 2015
3CFY
DownloadVisualize
BU of 3cfy by Molmil
Crystal structure of signal receiver domain of putative Luxo repressor protein from Vibrio parahaemolyticus
Descriptor: Putative LuxO repressor protein
Authors:Patskovsky, Y, Ramagopal, U.A, Fong, R, Freeman, J, Iizuka, M, Groshong, C, Smith, D, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-03-04
Release date:2008-03-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Signal Receiver Domain of Putative Luxo Repressor Protein from Vibrio Parahaemolyticus.
To be Published

226262

數據於2024-10-16公開中

PDB statisticsPDBj update infoContact PDBjnumon