Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8F5N
DownloadVisualize
BU of 8f5n by Molmil
Identification of an Immunodominant region on a Group A Streptococcus T-antigen Reveals Temperature-Dependent Motion in Pili
Descriptor: CALCIUM ION, Mouse-Human Fab heavy chain, Mouse-Human Fab light chain, ...
Authors:Raynes, J.M, Young, P.G, Moreland, N.J.
Deposit date:2022-11-14
Release date:2023-03-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification of an immunodominant region on a group A Streptococcus T-antigen reveals temperature-dependent motion in pili.
Virulence, 14, 2023
8ENO
DownloadVisualize
BU of 8eno by Molmil
Homocitrate-deficient nitrogenase MoFe-protein from A. vinelandii nifV knockout in complex with NafT
Descriptor: CHAPSO, CITRIC ACID, FE (III) ION, ...
Authors:Warmack, R.A, Maggiolo, A.O, Rees, D.C.
Deposit date:2022-09-30
Release date:2023-03-08
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Structural consequences of turnover-induced homocitrate loss in nitrogenase.
Nat Commun, 14, 2023
8F23
DownloadVisualize
BU of 8f23 by Molmil
The crystal structure of a rationally designed zinc sensor based on maltose binding protein - Apo conformation
Descriptor: Zinc Sensor protein
Authors:Zhao, Z, Zhou, M, Zemerov, S.d, Marmorstein, R, Dmochowski, I.J.
Deposit date:2022-11-06
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Rational design of a genetically encoded NMR zinc sensor.
Chem Sci, 14, 2023
8F5V
DownloadVisualize
BU of 8f5v by Molmil
Crystal structure of Mycobacterium tuberculosis Mycothiol S-transferase enzyme in complex with mycothiol and Zn2+
Descriptor: Conserved protein, Mycothiol, ZINC ION
Authors:Jayasinghe, Y.P, Ronning, D.R.
Deposit date:2022-11-15
Release date:2023-04-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Mycobacterium tuberculosis mycothiol S -transferase is divalent metal-dependent for mycothiol binding and transfer.
Rsc Med Chem, 14, 2023
8ETB
DownloadVisualize
BU of 8etb by Molmil
the crystal structure of a rationally designed zinc sensor based on maltose binding protein - Zn binding conformation
Descriptor: ACETATE ION, ZINC ION, Zinc Sensor protein
Authors:Zhao, Z, Zhou, M, Zemerov, S.D, Marmorstein, R, Dmochowski, I.J.
Deposit date:2022-10-16
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Rational design of a genetically encoded NMR zinc sensor.
Chem Sci, 14, 2023
8EUA
DownloadVisualize
BU of 8eua by Molmil
Structure of SARS-CoV2 PLpro bound to a covalent inhibitor
Descriptor: Papain-like protease nsp3, SULFATE ION, ZINC ION, ...
Authors:Mathews, I.I, Pokhrel, S, Wakatsuki, S.
Deposit date:2022-10-18
Release date:2023-04-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Potent and selective covalent inhibition of the papain-like protease from SARS-CoV-2.
Nat Commun, 14, 2023
8EQN
DownloadVisualize
BU of 8eqn by Molmil
BG505 UFO-E2p-L4P nanoparticle reconstructed by focused refinement with a mask around the nanoparticle core
Descriptor: BG505 UFO-E2p-L4P
Authors:Antanasijevic, A, Zhang, Y.N, Zhu, J, Ward, A.B.
Deposit date:2022-10-08
Release date:2023-04-19
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Single-component multilayered self-assembling protein nanoparticles presenting glycan-trimmed uncleaved prefusion optimized envelope trimmers as HIV-1 vaccine candidates.
Nat Commun, 14, 2023
8ERP
DownloadVisualize
BU of 8erp by Molmil
Structure of Xenopus cholinephosphotransferase1 in complex with CDP-choline
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Cholinephosphotransferase 1, MAGNESIUM ION, ...
Authors:Wang, L, Zhou, M.
Deposit date:2022-10-12
Release date:2023-04-26
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of a eukaryotic cholinephosphotransferase-1 reveals mechanisms of substrate recognition and catalysis.
Nat Commun, 14, 2023
8ERO
DownloadVisualize
BU of 8ero by Molmil
Structure of Xenopus cholinephosphotransferase1 in complex with CDP
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CYTIDINE-5'-DIPHOSPHATE, Cholinephosphotransferase 1, ...
Authors:Wang, L, Zhou, M.
Deposit date:2022-10-12
Release date:2023-04-26
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of a eukaryotic cholinephosphotransferase-1 reveals mechanisms of substrate recognition and catalysis.
Nat Commun, 14, 2023
8ESB
DownloadVisualize
BU of 8esb by Molmil
CryoEM structure of HLA-A2 bound to MAGEA8 (232-241) peptide
Descriptor: Beta-2-microglobulin,HLA class I antigen,MAGE-A8 peptide chimera
Authors:Saotome, K, Franklin, M.C.
Deposit date:2022-10-13
Release date:2023-05-03
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structural analysis of cancer-relevant TCR-CD3 and peptide-MHC complexes by cryoEM.
Nat Commun, 14, 2023
8ESA
DownloadVisualize
BU of 8esa by Molmil
CryoEM structure of HLA-A2 bound to MAGEA4 (230-239) peptide
Descriptor: Beta-2-microglobulin,HLA class I antigen,MAGE-A4 peptide chimera
Authors:Saotome, K, Franklin, M.C.
Deposit date:2022-10-13
Release date:2023-05-03
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural analysis of cancer-relevant TCR-CD3 and peptide-MHC complexes by cryoEM.
Nat Commun, 14, 2023
6FI9
DownloadVisualize
BU of 6fi9 by Molmil
Crystal Structure of a zinc-responsive MarR family member, Lactococcus lactis ZitR
Descriptor: Transcriptional regulator ZitR, ZINC ION
Authors:Varela, P.F, Legrand, P.
Deposit date:2018-01-17
Release date:2019-02-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Biophysical and structural characterization of a zinc-responsive repressor of the MarR superfamily.
PLoS ONE, 14, 2019
8ERL
DownloadVisualize
BU of 8erl by Molmil
CryoEM Structure of Lipoprotein Lipase Dimer
Descriptor: Lipoprotein lipase
Authors:Gunn, K.H, Neher, S.B.
Deposit date:2022-10-12
Release date:2023-05-03
Last modified:2023-05-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of dimeric lipoprotein lipase reveals a pore adjacent to the active site.
Nat Commun, 14, 2023
8EYW
DownloadVisualize
BU of 8eyw by Molmil
Beetroot dimer bound to ThT
Descriptor: 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium, POTASSIUM ION, RNA (49-MER)
Authors:Passalacqua, L.F.M, Ferre-D'Amare, A.R.
Deposit date:2022-10-28
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture.
Nat Commun, 14, 2023
8EYU
DownloadVisualize
BU of 8eyu by Molmil
Structure of Beetroot dimer bound to DFAME
Descriptor: POTASSIUM ION, RNA (49-MER), methyl (2E)-3-{(4Z)-4-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-1-methyl-5-oxo-4,5-dihydro-1H-imidazol-2-yl}prop-2-enoate
Authors:Passalacqua, L.F.M, Ferre-D'Amare, A.R.
Deposit date:2022-10-28
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture.
Nat Commun, 14, 2023
8EYV
DownloadVisualize
BU of 8eyv by Molmil
Structure of Beetroot dimer bound to DFHO
Descriptor: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, POTASSIUM ION, RNA (45-MER)
Authors:Passalacqua, L.F.M, Ferre-D'Amare, A.R.
Deposit date:2022-10-28
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture.
Nat Commun, 14, 2023
8F0N
DownloadVisualize
BU of 8f0n by Molmil
Wobble Beetroot (A16U-U38G) dimer bound to DFHO
Descriptor: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, POTASSIUM ION, RNA (49-MER)
Authors:Passalacqua, L.F.M, Ferre-D'Amare, A.R.
Deposit date:2022-11-03
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Co-crystal structures of the fluorogenic aptamer Beetroot show that close homology may not predict similar RNA architecture.
Nat Commun, 14, 2023
8ESM
DownloadVisualize
BU of 8esm by Molmil
Human triacylglycerol synthesizing enzyme DGAT1 in complex with T863 inhibitor
Descriptor: Diacylglycerol O-acyltransferase 1, {(1r,4r)-4-[4-(4-amino-7,7-dimethyl-7H-pyrimido[4,5-b][1,4]oxazin-6-yl)phenyl]cyclohexyl}acetic acid
Authors:Sui, X, Kun, W, Walther, T, Farese, R, Liao, M.
Deposit date:2022-10-14
Release date:2023-06-07
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of action for small-molecule inhibitors of triacylglycerol synthesis.
Nat Commun, 14, 2023
8F6Y
DownloadVisualize
BU of 8f6y by Molmil
Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with etomidate, desensitized-like state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goswami, U, Rahman, M.M, Teng, J, Hibbs, R.E.
Deposit date:2022-11-17
Release date:2023-06-07
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Structural interplay of anesthetics and paralytics on muscle nicotinic receptors.
Nat Commun, 14, 2023
8ETM
DownloadVisualize
BU of 8etm by Molmil
Human triacylglycerol synthesizing enzyme DGAT1 in complex with DGAT1IN1 inhibitor
Descriptor: Diacylglycerol O-acyltransferase 1, [(1S,4r)-4-{4-[(4S)-2-({[4-(trifluoromethoxy)phenyl]methyl}carbamoyl)imidazo[1,2-a]pyridin-6-yl]phenyl}cyclohexyl]acetic acid
Authors:Sui, X, Kun, W, Walther, T, Farese, R, Liao, M.
Deposit date:2022-10-17
Release date:2023-06-07
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of action for small-molecule inhibitors of triacylglycerol synthesis.
Nat Commun, 14, 2023
8ESK
DownloadVisualize
BU of 8esk by Molmil
Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with rocuronium, resting-like state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goswami, U, Rahman, M.M, Teng, J, Hibbs, R.E.
Deposit date:2022-10-14
Release date:2023-06-07
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural interplay of anesthetics and paralytics on muscle nicotinic receptors.
Nat Commun, 14, 2023
8F6Z
DownloadVisualize
BU of 8f6z by Molmil
Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with succinylcholine, desensitized-like state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2,2'-[(1,4-DIOXOBUTANE-1,4-DIYL)BIS(OXY)]BIS(N,N,N-TRIMETHYLETHANAMINIUM), 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goswami, U, Rahman, M.M, Teng, J, Hibbs, R.E.
Deposit date:2022-11-17
Release date:2023-06-07
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural interplay of anesthetics and paralytics on muscle nicotinic receptors.
Nat Commun, 14, 2023
8F2S
DownloadVisualize
BU of 8f2s by Molmil
Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with rocuronium, pore-blocked state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goswami, U, Rahman, M.M, Teng, J, Hibbs, R.E.
Deposit date:2022-11-08
Release date:2023-06-07
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural interplay of anesthetics and paralytics on muscle nicotinic receptors.
Nat Commun, 14, 2023
8F5F
DownloadVisualize
BU of 8f5f by Molmil
human branched chain ketoacid dehydrogenase kinase in complex with inhibitors
Descriptor: (2P)-2-[(4P)-4-{6-[(1-ethylcyclopropyl)methoxy]pyridin-3-yl}-1,3-thiazol-2-yl]benzoic acid, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Liu, S, Roth Flach, R, Bollinger, E, Filipski, K.
Deposit date:2022-11-14
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.149 Å)
Cite:Small molecule branched-chain ketoacid dehydrogenase kinase (BDK) inhibitors with opposing effects on BDK protein levels.
Nat Commun, 14, 2023
6F27
DownloadVisualize
BU of 6f27 by Molmil
NMR solution structure of non-bound [des-Arg10]-kallidin (DAKD)
Descriptor: DAKD
Authors:Richter, C, Jonker, H.R.A, Schwalbe, H, Joedicke, L, Mao, J, Kuenze, G, Reinhart, C, Kalavacherla, T, Meiler, J, Preu, J, Michel, H, Glaubitz, C.
Deposit date:2017-11-23
Release date:2018-01-10
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The molecular basis of subtype selectivity of human kinin G-protein-coupled receptors.
Nat. Chem. Biol., 14, 2018

225946

數據於2024-10-09公開中

PDB statisticsPDBj update infoContact PDBjnumon