PDB: 5591 resultsInfo pagesStatus searchChemie searchBIRD

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9CEQ	Lanthanide Binding Tag complex LBT3-NH2:La3+ Descriptor: LANTHANUM (III) ION, Lanthanide Binding Tag Peptide Authors: Kt, S, Messinger, R.J, Favaro, D.C. Deposit date: 2024-06-27 Release date: 2024-07-17 Method: SOLUTION NMR Cite: Role of Water in the Selective Complexation of Rare Earth Elements by Lanthanide Binding Tag Peptides To Be Published
2WQH	Crystal structure of CTPR3Y3 Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ... Authors: Krachler, A.M, Sharma, A, Kleanthous, C. Deposit date: 2009-08-21 Release date: 2010-04-07 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Self-association of TPR domains: Lessons learned from a designed, consensus-based TPR oligomer. Proteins, 78, 2010
5AWL	CRYSTAL STRUCTURE OF A MUTANT OF CHIGNOLIN, CLN025 Descriptor: A mutant of Chignolin, CLN025 Authors: Akiba, T, Ishimura, M, Odahara, T, Harata, K, Honda, S. Deposit date: 2015-07-05 Release date: 2015-08-12 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.11 Å) Cite: Crystal structure of a ten-amino acid protein J.Am.Chem.Soc., 130, 2008
5BVB	Engineered Digoxigenin binder DIG5.1a Descriptor: DIG5.1a, DIGOXIGENIN Authors: Doyle, L.A, Stoddard, B.L. Deposit date: 2015-06-04 Release date: 2015-10-28 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.06 Å) Cite: CSAR Benchmark Exercise 2013: Evaluation of Results from a Combined Computational Protein Design, Docking, and Scoring/Ranking Challenge. J.Chem.Inf.Model., 56, 2016
6MCT	A designed pentameric membrane protein stabilized by van der Waals interaction Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, mini-eVgL membrane protein Authors: Mravic, M, Liu, L, Degrado, W.F. Deposit date: 2018-09-02 Release date: 2019-04-03 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Packing of apolar side chains enables accurate design of highly stable membrane proteins. Science, 363, 2019
7Z7C	Broadly neutralizing DARPin bnD.8 in complex with the HIV-1 envelope variable loop 3 peptide V3 (BF520) Descriptor: 1,2-ETHANEDIOL, Broadly neutralizing DARPin bnD.8, Envelope glycoprotein gp160, ... Authors: Mittl, P.R, Gloegl, M. Deposit date: 2022-03-15 Release date: 2023-03-29 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.22 Å) Cite: Trapping the HIV-1 V3 loop in a helical conformation enables broad neutralization. Nat.Struct.Mol.Biol., 30, 2023
7ZBS	Solution NMR structure of the HTH_8cm consensus miniprotein in 30% TFE at 278K Descriptor: HTH_8cm Authors: Socha, O, Jakubec, D. Deposit date: 2022-03-24 Release date: 2022-04-06 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Consensus design of structured miniproteins using spectral analysis of domain residue interaction networks To Be Published
9AZI	NMR solution structure of cell-permeant miniature protein ZF5.3 Descriptor: Designed Zinc finger protein 5.3, ZINC ION Authors: Giudice, J.A, Kelly, M, Schepartz, A. Deposit date: 2024-03-11 Release date: 2024-05-01 Method: SOLUTION NMR Cite: Structural and mechanistic basis for efficient endosomal escape by designed mini-proteins To be published
6E5J	Heterogeneous-Backbone Mimics of a Designed Disulfide-Rich Protein: Aib turn, beta3 helix, N-methyl hairpin Descriptor: Designed peptide NC_HEE_D1: Aib turn, beta3 helix, N-methyl hairpin mutant Authors: Cabalteja, C.C, Mihalko, D.S, Horne, W.S. Deposit date: 2018-07-20 Release date: 2018-11-21 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Heterogeneous-Backbone Foldamer Mimics of a Computationally Designed, Disulfide-Rich Miniprotein. Chembiochem, 20, 2019
6E5K	Heterogeneous-Backbone Mimics of a Designed Disulfide-Rich Protein: Aib turn, Aib helix, N-methyl hairpin Descriptor: Designed peptide NC_HEE_D1: Aib turn, Aib helix, N-methyl hairpin mutant Authors: Cabalteja, C.C, Mihalko, D.S, Horne, W.S. Deposit date: 2018-07-20 Release date: 2018-11-21 Last modified: 2020-01-01 Method: SOLUTION NMR Cite: Heterogeneous-Backbone Foldamer Mimics of a Computationally Designed, Disulfide-Rich Miniprotein. Chembiochem, 20, 2019
6E5I	Heterogeneous-Backbone Mimics of a Designed Disulfide-Rich Protein: Orn turn Descriptor: Designed peptide NC_HEE_D1: Orn turn mutant Authors: Cabalteja, C.C, Mihalko, D.S, Horne, W.S. Deposit date: 2018-07-20 Release date: 2018-11-21 Last modified: 2020-01-01 Method: SOLUTION NMR Cite: Heterogeneous-Backbone Foldamer Mimics of a Computationally Designed, Disulfide-Rich Miniprotein. Chembiochem, 20, 2019
1LB7	IGF-F1-1, A PEPTIDE ANTAGONIST OF IGF-1 Descriptor: IGF-1 ANTAGONIST F1-1 Authors: Deshayes, K, Schaffer, M.L, Skelton, N.J, Nakamura, G.R, Kadkhodayan, S, Sidhu, S.S. Deposit date: 2002-04-02 Release date: 2002-06-19 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: Rapid identification of small binding motifs with high-throughput phage display: discovery of peptidic antagonists of IGF-1 function. Chem.Biol., 9, 2002
1N0A	Turn stability in beta-hairpin peptides: 3:5 type I G1 bulge turns Descriptor: bhpw_pdg, beta-hairpin peptide Authors: Blandl, T, Cochran, A.G, Skelton, N.J. Deposit date: 2002-10-11 Release date: 2003-10-21 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: Turn stability in beta-hairpin peptides: Investigation of peptides containing 3:5 type I G1 bulge turns PROTEIN SCI., 12, 2003
7Q3J	Computationally designed thioredoxin subjected to stability optimizing mutations. Descriptor: GLYCEROL, MM9 Authors: Norrild, R.K, Johansson, K.E, O'Shea, C, Lindorff-Larsen, K, Winther, J.R, Morth, J.P. Deposit date: 2021-10-27 Release date: 2022-11-16 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Increasing protein stability by inferring substitution effects from high-throughput experiments. Cell Rep Methods, 2, 2022
7YH8	Crystal structure of a heterochiral protein complex Descriptor: D-Pep-1, L-19437 Authors: Liang, M, Li, S, Wang, T, Liu, L, Lu, P. Deposit date: 2022-07-13 Release date: 2023-07-19 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of a heterochiral protein complex To Be Published
6BDA	Wild-type I-OnuI bound to A3G substrate (post-cleavage complex) Descriptor: Cleaved Cognate DNA strand, +11 sense, Cleaved cognate DNA strand, ... Authors: Brown, C, Zhang, K, Laforet, M, McMurrough, T, Gloor, G.B, Edgell, D.R, Junop, M. Deposit date: 2017-10-22 Release date: 2018-10-24 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Wild-type I-OnuI bound to A3G substrate (post-cleavage complex) To Be Published
4V3R	Designed armadillo repeat protein with 5 internal repeats, 2nd generation C-cap and 3rd generation N-cap. Descriptor: MAGNESIUM ION, YIII_M5_AII Authors: Reichen, C, Madhurantakam, C, Pluckthun, A, Mittl, P. Deposit date: 2014-10-20 Release date: 2016-01-13 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structures of Designed Armadillo-Repeat Proteins Show Propagation of Inter-Repeat Interface Effects Acta Crystallogr.,Sect.D, 72, 2016
4V3O	Designed armadillo repeat protein with 5 internal repeats, 2nd generation C-cap and 3rd generation N-cap. Descriptor: ACETATE ION, CALCIUM ION, YIII_M5_AII Authors: Reichen, C, Madhurantakam, C, Pluckthun, A, Mittl, P. Deposit date: 2014-10-20 Release date: 2016-01-13 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2 Å) Cite: Structures of Designed Armadillo-Repeat Proteins Show Propagation of Inter-Repeat Interface Effects Acta Crystallogr.,Sect.D, 72, 2016
4W5M	Prp peptide Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, PrP peptide Authors: Yu, L, Lee, S.-J, Yee, V. Deposit date: 2014-08-18 Release date: 2015-05-27 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations. Biochemistry, 54, 2015
4W5Y	Crystal structure of Prp pepttide Descriptor: Prp peptide Authors: Yu, L, Lee, S.-J, Yee, V. Deposit date: 2014-08-19 Release date: 2015-05-27 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.122 Å) Cite: Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations. Biochemistry, 54, 2015
4W5L	Crystal structure of a prp peptide Descriptor: PrP peptide Authors: Yu, L, Lee, S.-J, Yee, V. Deposit date: 2014-08-18 Release date: 2015-05-27 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1 Å) Cite: Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations. Biochemistry, 54, 2015
4WBV	Crystal structure of a prion peptide Descriptor: PrP peptide Authors: Yu, L, Lee, S.-J, Yee, V. Deposit date: 2014-09-03 Release date: 2015-05-27 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations. Biochemistry, 54, 2015
4WPY	Racemic crystal structure of Rv1738 from Mycobacterium tuberculosis (Form-II) Descriptor: GLYCEROL, protein DL-Rv1738, trifluoroacetic acid Authors: Bunker, R.D, Mandal, K, Kent, S.B.H, Baker, E.N. Deposit date: 2014-10-21 Release date: 2015-03-18 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.5 Å) Cite: A functional role of Rv1738 in Mycobacterium tuberculosis persistence suggested by racemic protein crystallography. Proc.Natl.Acad.Sci.USA, 112, 2015
4WN4	Crystal structure of designed cPPR-polyA protein Descriptor: Pentatricopeptide repeat protein Authors: Coquille, S.C, Filipovska, A, Chia, T.S, Rajappa, L, Lingford, J.P, Razif, M.F.M, Thore, S, Rackham, O. Deposit date: 2014-10-10 Release date: 2014-12-24 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (3.85 Å) Cite: An artificial PPR scaffold for programmable RNA recognition. Nat Commun, 5, 2014
4WSP	Racemic crystal structure of Rv1738 from Mycobacterium tuberculosis (Form-I) Descriptor: CHLORIDE ION, protein DL-Rv1738 Authors: Bunker, R.D, Mandal, K, Kent, S.B.H, Baker, E.N. Deposit date: 2014-10-28 Release date: 2015-03-18 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.65 Å) Cite: A functional role of Rv1738 in Mycobacterium tuberculosis persistence suggested by racemic protein crystallography. Proc.Natl.Acad.Sci.USA, 112, 2015

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