Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BAW
DownloadVisualize
BU of 7baw by Molmil
A heptameric barrel state of a de novo coiled-coil assembly: CC-Type2-(GgIaId)4
Descriptor: CC-Type2-(GgIaId)4, GLYCEROL, N-PROPANOL
Authors:Martin, F.J.O, Dawson, W.M, Brady, R.L, Woolfson, D.N.
Deposit date:2020-12-16
Release date:2021-04-28
Last modified:2021-11-17
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states.
Chem Sci, 12, 2021
6UIH
DownloadVisualize
BU of 6uih by Molmil
Crystal structure of the core domain from the GST-like protein GDAP1
Descriptor: Ganglioside-induced differentiation-associated protein 1
Authors:Googins, M.R, VanDemark, A.P.
Deposit date:2019-09-30
Release date:2020-04-29
Last modified:2020-05-13
Method:X-RAY DIFFRACTION (2.826 Å)
Cite:Structural and functional divergence of GDAP1 from the glutathione S-transferase superfamily.
Faseb J., 34, 2020
5M48
DownloadVisualize
BU of 5m48 by Molmil
Coiled coil domain of Rtt103p
Descriptor: Regulator of Ty1 transposition protein 103
Authors:Jasnovidova, O, Kalynych, S, Plevka, P, Stefl, R.
Deposit date:2016-10-18
Release date:2017-10-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.593 Å)
Cite:Structure and dynamics of the RNAPII CTDsome with Rtt103.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6U1E
DownloadVisualize
BU of 6u1e by Molmil
Thermus thermophilus D-alanine-D-alanine ligase in complex with ATP, D-alanine-D-alanine, Mg2+ and Rb+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ...
Authors:Pederick, J.L, Bruning, J.B.
Deposit date:2019-08-15
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations.
J.Biol.Chem., 295, 2020
6UIY
DownloadVisualize
BU of 6uiy by Molmil
Artificial Iron Proteins: Modelling the Active Sites in Non-Heme Dioxygenases
Descriptor: ACETATE ION, Streptavidin, {5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-N-(2-{[(pyridin-2-yl)methyl][(pyridin-2-yl-kappaN)methyl]amino-kappaN}ethyl)pentanamide}iron(2+)
Authors:Miller, K.R, Paretsky, J.D, Follmer, A.H, Heinisch, T, Mittra, K, Gul, S, Kim, I.-S, Fuller, F.D, Batyuk, A, Sutherlin, K.D, Brewster, A.S, Bhowmick, A, Sauter, N.K, Kern, J, Yano, J, Green, M.T, Ward, T.R, Borovik, A.S.
Deposit date:2019-10-01
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Artificial Iron Proteins: Modeling the Active Sites in Non-Heme Dioxygenases.
Inorg.Chem., 59, 2020
5LPE
DownloadVisualize
BU of 5lpe by Molmil
Kallikrein-related peptidase 10 complex with Zn2+
Descriptor: Kallikrein-10, SULFATE ION, ZINC ION
Authors:Goettig, P, Debela, M, Magdolen, V, Bode, W, Brandstetter, H.
Deposit date:2016-08-12
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis for the Zn2+ inhibition of the zymogen-like kallikrein-related peptidase 10.
Biol.Chem., 397, 2016
7BM8
DownloadVisualize
BU of 7bm8 by Molmil
Crystal structure of the C-terminally truncated chromosome-partitioning protein ParB from Caulobacter crescentus complexed with CTP-gamma-S
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, Chromosome-partitioning protein ParB, MAGNESIUM ION
Authors:Jalal, A.S, Tran, N.T, Stevenson, C.E.M, Lawson, D.M, Le, T.B.K.
Deposit date:2021-01-19
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:A CTP-dependent gating mechanism enables ParB spreading on DNA.
Elife, 10, 2021
6UKM
DownloadVisualize
BU of 6ukm by Molmil
STING C-terminal Domain Complexed with Non-cyclic Dinucleotide Compound MSA-2
Descriptor: 4-(5,6-dimethoxy-1-benzothiophen-2-yl)-4-oxobutanoic acid, fusion protein of Ubiquitin-like protein SMT3 and Stimulator of interferon protein c-terminal domain
Authors:Lesburg, C.A.
Deposit date:2019-10-05
Release date:2020-08-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:An orally available non-nucleotide STING agonist with antitumor activity.
Science, 369, 2020
5LQS
DownloadVisualize
BU of 5lqs by Molmil
Structure of quinolinate synthase Y21F mutant in complex with substrate-derived quinolinate
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, QUINOLINIC ACID, ...
Authors:Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2016-08-17
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of Quinolinate Synthase in Complex with a Substrate Analogue, the Condensation Intermediate, and Substrate-Derived Product.
J.Am.Chem.Soc., 138, 2016
5LR1
DownloadVisualize
BU of 5lr1 by Molmil
CRYSTAL STRUCTURE OF HSP90 IN COMPLEX WITH A003498614A.
Descriptor: 4-chloranyl-7-[(4-chloranyl-3,5-dimethyl-pyridin-2-yl)methyl]pyrrolo[2,3-d]pyrimidin-2-amine, Heat shock protein HSP 90-alpha
Authors:Vallee, F, Dupuy, A.
Deposit date:2016-08-18
Release date:2017-08-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:CRYSTAL STRUCTURE OF HSP90 IN COMPLEX WITH A003498614A.
To Be Published
5LR4
DownloadVisualize
BU of 5lr4 by Molmil
RNA duplex has central consecutive GA pairs flanked by G-U basepairs with a methyl group on the adenine N6
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*(6MZ)P*UP*GP*GP*C)-3'), SODIUM ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-18
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
5LRR
DownloadVisualize
BU of 5lrr by Molmil
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with glutathione
Descriptor: GLUTATHIONE, HYDROGENPHOSPHATE ION, Listeriolysin positive regulatory factor A, ...
Authors:Hall, M, Grundstrom, C, Begum, A, Lindberg, M, Sauer, U.H, Almqvist, F, Johansson, J, Sauer-Eriksson, A.E.
Deposit date:2016-08-19
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.171 Å)
Cite:Structural basis for glutathione-mediated activation of the virulence regulatory protein PrfA in Listeria.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LT1
DownloadVisualize
BU of 5lt1 by Molmil
nucleotide-free kinesin-1 motor domain T92V mutant, P21 crystal form
Descriptor: ACETATE ION, Kinesin-like protein, STRONTIUM ION, ...
Authors:Cao, L, Gigant, B.
Deposit date:2016-09-06
Release date:2017-03-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:The structural switch of nucleotide-free kinesin.
Sci Rep, 7, 2017
5LON
DownloadVisualize
BU of 5lon by Molmil
Structure of /K. lactis/ Dcp1-Dcp2 decapping complex.
Descriptor: KLLA0E01827p, KLLA0F23980p
Authors:Charenton, C, Taverniti, V, Gaudon-Plesse, C, Back, R, Seraphin, B, Graille, M.
Deposit date:2016-08-09
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the active form of Dcp1-Dcp2 decapping enzyme bound to m(7)GDP and its Edc3 activator.
Nat.Struct.Mol.Biol., 23, 2016
5LP7
DownloadVisualize
BU of 5lp7 by Molmil
Crystal structure of 3-Ketoacyl-CoA Thiolase (MmgA) from Bacillus subtilis.
Descriptor: Acetyl-CoA acetyltransferase, GLYCEROL
Authors:Baker, G.E, Race, P.R.
Deposit date:2016-08-11
Release date:2016-08-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of 3-Ketoacyl-CoA Thiolase (MmgA) from Bacillus subtilis.
To Be Published
5LVH
DownloadVisualize
BU of 5lvh by Molmil
Hen Egg White Lysozyme co-crystallized with trans-Ru(DMSO)4Cl2
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Kurpiewska, K, Halajko, P, Lewinski, K.
Deposit date:2016-09-14
Release date:2016-09-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Ligand-dependent interaction of anticancer ruthenium complexes with hen egg white lysozyme and human lysozyme
To Be Published
5LQ8
DownloadVisualize
BU of 5lq8 by Molmil
1.52 A resolution structure of PhnD1 from Prochlorococcus marinus (MIT 9301) in complex with methylphosphonate
Descriptor: METHYLPHOSPHONIC ACID ESTER GROUP, Putative phosphonate binding protein for ABC transporter
Authors:Bisson, C, Adams, N.B.P, Polyviou, D, Bibby, T.S, Hunter, C.N, Hitchcock, A.
Deposit date:2016-08-16
Release date:2017-12-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:The molecular basis of phosphite and hypophosphite recognition by ABC-transporters.
Nat Commun, 8, 2017
5LQO
DownloadVisualize
BU of 5lqo by Molmil
RNA duplex has central consecutive GA pairs flanked by G-C basepairs
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*AP*CP*GP*GP*C)-3')
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-17
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
6UBV
DownloadVisualize
BU of 6ubv by Molmil
The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, N-(3,4-dihydroxyphenyl)-N'-[2-(3,4-dihydroxyphenyl)ethyl]urea, ...
Authors:Schormann, N, Deivanayagam, C.
Deposit date:2019-09-13
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
To Be Published
5LQQ
DownloadVisualize
BU of 5lqq by Molmil
Structure of Autotaxin (ENPP2) with LM350
Descriptor: 3-(6-chloranyl-2-methyl-1-phenyl-indol-3-yl)sulfanylbenzoic acid, CALCIUM ION, Ectonucleotide pyrophosphatase/phosphodiesterase family member 2, ...
Authors:Keune, W.J, Heidebrecht, T, Castelmur, E, Joosten, R.P, Perrakis, A.
Deposit date:2016-08-17
Release date:2016-12-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-Activity Relationships of Small Molecule Autotaxin Inhibitors with a Discrete Binding Mode.
J. Med. Chem., 60, 2017
5LWQ
DownloadVisualize
BU of 5lwq by Molmil
CeuE (H227L variant) a periplasmic protein from Campylobacter jejuni
Descriptor: BROMIDE ION, Enterochelin uptake periplasmic binding protein, SODIUM ION
Authors:Wilde, E.J, Blagova, E, Hughes, A, Raines, D.J, Moroz, O.V, Turkenburg, J.P, Duhme-Klair, A.-K, Wilson, K.S.
Deposit date:2016-09-19
Release date:2017-04-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Interactions of the periplasmic binding protein CeuE with Fe(III) n-LICAM(4-) siderophore analogues of varied linker length.
Sci Rep, 7, 2017
5LXA
DownloadVisualize
BU of 5lxa by Molmil
CRYSTAL STRUCTURE OF HUMAN ADIPONECTIN RECEPTOR 2 IN COMPLEX WITH A C18 FREE FATTY ACID AT 3.0 ANGSTROM RESOLUTION
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Adiponectin receptor protein 2, Anti-CD30 moab Ki-4 scFv, ...
Authors:Vasiliauskaite-Brooks, I, Leyrat, C, Hoh, F, Granier, S.
Deposit date:2016-09-20
Release date:2017-03-22
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into adiponectin receptors suggest ceramidase activity.
Nature, 6, 2017
5LRY
DownloadVisualize
BU of 5lry by Molmil
E coli [NiFe] Hydrogenase Hyd-1 mutant E28D
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Carr, S.B, Phillips, S.E.V, Evans, R.M, Brooke, E.J, Armstrong, F.A.
Deposit date:2016-08-22
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanistic Exploitation of a Self-Repairing, Blocked Proton Transfer Pathway in an O2-Tolerant [NiFe]-Hydrogenase.
J.Am.Chem.Soc., 140, 2018
5LST
DownloadVisualize
BU of 5lst by Molmil
Crystal structure of the human RecQL4 helicase.
Descriptor: ATP-dependent DNA helicase Q4, ZINC ION
Authors:Kaiser, S, Sauer, F, Kisker, C.
Deposit date:2016-09-05
Release date:2017-07-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structural and functional characterization of human RecQ4 reveals insights into its helicase mechanism.
Nat Commun, 8, 2017
7BJ3
DownloadVisualize
BU of 7bj3 by Molmil
ScpA from Streptococcus pyogenes, S512A active site mutant
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, C5a peptidase, CALCIUM ION, ...
Authors:Kagawa, T.F, O'Connell, M.R, Cooney, J.C.
Deposit date:2021-01-13
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Enzyme kinetic and binding studies identify determinants of specificity for the immunomodulatory enzyme ScpA, a C5a inactivating bacterial protease.
Comput Struct Biotechnol J, 19, 2021

224201

數據於2024-08-28公開中

PDB statisticsPDBj update infoContact PDBjnumon