PDB: 1507 resultsInfo pagesStatus searchChemie searchBIRD

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1MG8	NMR structure of ubiquitin-like domain in murine Parkin Descriptor: Parkin Authors: Tashiro, M, Okubo, S, Shimotakahara, S, Hatanaka, H, Yasuda, H, Kainosho, M, Yokoyama, S, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2002-08-15 Release date: 2003-04-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease. J.Biomol.NMR, 25, 2003
5VIX	Crystal structure of Polyubiquitin with 3 ub domains, domains 1 and 2, from Naegleria fowleri ATCC 30863 Descriptor: NITRATE ION, Polyubiquitin Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2017-04-17 Release date: 2017-05-24 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structure of polyubiquitin with 3 ub domains, domains 1 and 2, from Naegleria fowleri ATCC 30863 TO BE PUBLISHED
6QF8	Solution NMR ensemble for human ubiquitin at 298K compiled using the CoMAND method Descriptor: Polyubiquitin-B Authors: ElGamacy, M, Truffault, V, Zhu, H, Coles, M. Deposit date: 2019-01-09 Release date: 2019-04-10 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Mapping Local Conformational Landscapes of Proteins in Solution. Structure, 27, 2019
4DWF	Crystal structure of a HLA-B associated transcript 3 (BAT3) from Homo sapiens at 1.80 A resolution Descriptor: HLA-B-associated transcript 3, SULFATE ION Authors: Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL) Deposit date: 2012-02-24 Release date: 2012-03-28 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of a HLA-B associated transcript 3 (BAT3) from Homo sapiens at 1.80 A resolution To be published
2GBR	Crystal Structure of the 35-36 MoaD Insertion Mutant of Ubiquitin Descriptor: CADMIUM ION, Ubiquitin Authors: Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D. Deposit date: 2006-03-10 Release date: 2006-05-16 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2 Å) Cite: Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. J.Mol.Biol., 359, 2006
2GBJ	Crystal Structure of the 9-10 8 Glycine Insertion Mutant of Ubiquitin. Descriptor: Ubiquitin Authors: Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D. Deposit date: 2006-03-10 Release date: 2006-05-16 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. J.Mol.Biol., 359, 2006
2GBN	Crystal Structure of the 35-36 8 Glycine Insertion Mutant of Ubiquitin Descriptor: Ubiquitin Authors: Ferraro, D.M, Ferraro, D.J, Ramaswamy, S, Robertson, A.D. Deposit date: 2006-03-10 Release date: 2006-05-16 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structures of Ubiquitin Insertion Mutants Support Site-specific Reflex Response to Insertions Hypothesis. J.Mol.Biol., 359, 2006
1F9J	STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITIN Descriptor: TETRAUBIQUITIN Authors: Phillips, C.L, Thrower, J, Pickart, C.M, Hill, C.P. Deposit date: 2000-07-10 Release date: 2001-02-07 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structure of a new crystal form of tetraubiquitin. Acta Crystallogr.,Sect.D, 57, 2001
1BT0	STRUCTURE OF UBIQUITIN-LIKE PROTEIN, RUB1 Descriptor: 1,2-ETHANEDIOL, PROTEIN (UBIQUITIN-LIKE PROTEIN 7, RUB1), ... Authors: Delacruz, W.P, Fisher, A.J. Deposit date: 1998-09-02 Release date: 1998-12-30 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (1.7 Å) Cite: The rub family of ubiquitin-like proteins. Crystal structure of Arabidopsis rub1 and expression of multiple rubs in Arabidopsis. J.Biol.Chem., 273, 1998
1AAR	STRUCTURE OF A DIUBIQUITIN CONJUGATE AND A MODEL FOR INTERACTION WITH UBIQUITIN CONJUGATING ENZYME (E2) Descriptor: DI-UBIQUITIN Authors: Cook, W.J, Jeffrey, L.C, Carson, M, Chen, Z, Pickart, C.M. Deposit date: 1992-04-17 Release date: 1993-10-31 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structure of a diubiquitin conjugate and a model for interaction with ubiquitin conjugating enzyme (E2). J.Biol.Chem., 267, 1992
1C3T	ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY Descriptor: PROTEIN (1D8 UBIQUITIN) Authors: Lazar, G.A, Johnson, E.C, Desjarlais, J.R, Handel, T.M. Deposit date: 1999-07-28 Release date: 1999-08-20 Last modified: 2024-04-10 Method: SOLUTION NMR Cite: Rotamer strain as a determinant of protein structural specificity. Protein Sci., 8, 1999
1G6J	STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSE MICELLES Descriptor: UBIQUITIN Authors: Babu, C.R, Flynn, P.F, Wand, A.J. Deposit date: 2000-11-06 Release date: 2001-03-28 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Validation of protein structure from preparations of encapsulated proteins dissolved in low viscosity fluids. J.Am.Chem.Soc., 123, 2001
1GJZ	Solution structure of a dimeric N-terminal fragment of human ubiquitin Descriptor: UBIQUITIN Authors: Bolton, D, Evans, P.A, Stott, K, Broadhurst, R.W. Deposit date: 2001-08-06 Release date: 2001-12-13 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure and Properties of a Dimeric N-Terminal Fragment of Human Ubiquitin. J.Mol.Biol., 314, 2001
1D3Z	UBIQUITIN NMR STRUCTURE Descriptor: PROTEIN (UBIQUITIN) Authors: Cornilescu, G, Marquardt, J.L, Ottiger, M, Bax, A. Deposit date: 1999-10-01 Release date: 1999-10-14 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Validation of Protein Structure from Anisotropic Carbonyl Chemical Shifts in a Dilute Liquid Crystalline Phase J.Am.Chem.Soc., 120, 1998
6K4I	The partially disordered conformation of ubiquitin (Q41N variant) Descriptor: ubiquitin Authors: Wakamoto, T, Ikeya, T, Kitazawa, S, Baxter, N.J, Williamson, M.P, Kitahara, R. Deposit date: 2019-05-24 Release date: 2019-10-30 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Paramagnetic relaxation enhancement-assisted structural characterization of a partially disordered conformation of ubiquitin. Protein Sci., 28, 2019
6KNA	Viral Ubiquitin from Autographa californica Nucleo Polyhedrosis Virus Descriptor: Viral ubiquitin Authors: Negi, H, Reddy, P.P, Das, R. Deposit date: 2019-08-05 Release date: 2020-06-17 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: A novel polyubiquitin chain linkage formed by viral Ubiquitin is resistant to host deubiquitinating enzymes. Biochem.J., 477, 2020
1J8C	Solution Structure of the Ubiquitin-like Domain of hPLIC-2 Descriptor: ubiquitin-like protein hPLIC-2 Authors: Walters, K.J, Kleijnen, M.F, Goh, A.M, Wagner, G, Howley, P.M. Deposit date: 2001-05-21 Release date: 2002-03-20 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural studies of the interaction between ubiquitin family proteins and proteasome subunit S5a. Biochemistry, 41, 2002
6KOX	Relaxed state of S65/T66 double-phosphorylated ubiquitin Descriptor: Polyubiquitin-B Authors: Dong, X, Tang, C. Deposit date: 2019-08-13 Release date: 2019-08-28 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Ubiquitin is double-phosphorylated by PINK1 for enhanced pH-sensitivity of conformational switch. Protein Cell, 10, 2019
1L2N	Smt3 Solution Structure Descriptor: Ubiquitin-like protein SMT3 Authors: Sheng, W, Liao, X. Deposit date: 2002-02-22 Release date: 2002-03-06 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of a yeast ubiquitin-like protein Smt3: the role of structurally less defined sequences in protein-protein recognitions. Protein Sci., 11, 2002
1IYF	Solution structure of ubiquitin-like domain of human parkin Descriptor: parkin Authors: Sakata, E, Yamaguchi, Y, Kurimoto, E, Kikuchi, J, Yokoyama, S, Kawahara, H, Yokosawa, H, Hattori, N, Mizuno, Y, Tanaka, K, Kato, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2002-08-13 Release date: 2003-03-25 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Parkin binds the Rpn10 subunit of 26S proteasomes through its ubiquitin-like domain EMBO REP., 4, 2003
1M94	Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1 Descriptor: Protein YNR032c-a Authors: Ramelot, T.A, Cort, J.R, Yee, A.A, Semesi, A, Edwards, A.M, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG) Deposit date: 2002-07-26 Release date: 2002-12-11 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution Structure of the Yeast Ubiquitin-Like Modifier Protein Hub1 J.STRUCT.FUNCT.GENOM., 4, 2003
5KHY	Crystal structure of oxime-linked K6 diubiquitin Descriptor: ETHANOLAMINE, Polyubiquitin-B, ZINC ION Authors: Stanley, M, Virdee, S. Deposit date: 2016-06-16 Release date: 2016-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (3.501 Å) Cite: Genetically Directed Production of Recombinant, Isosteric and Nonhydrolysable Ubiquitin Conjugates. Chembiochem, 17, 2016
4UN2	Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin Descriptor: UBIQUITIN, UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2 Authors: Michielssens, S, Peters, J.H, Ban, D, Pratihar, S, Seeliger, D, Sharma, M, Giller, K, Sabo, T.M, Becker, S, Lee, D, Griesinger, C, de Groot, B.L. Deposit date: 2014-05-23 Release date: 2014-08-27 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.51 Å) Cite: A Designed Conformational Shift to Control Protein Binding Specificity. Angew.Chem.Int.Ed.Engl., 53, 2014
8DMS	Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester soaked with ADP-ribose Descriptor: CITRATE ANION, METHYL 4-AMINOBUTANOATE, MavL, ... Authors: Zhang, Z, Das, C. Deposit date: 2022-07-08 Release date: 2023-07-12 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester soaked with ADP-ribose To Be Published
8DMQ	Crystal structure of Legionella pneumophila macrodomain MavL in complex with ubiquitin vinyl methyl ester Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, METHYL 4-AMINOBUTANOATE, ... Authors: Zhang, Z, Das, C. Deposit date: 2022-07-08 Release date: 2023-07-12 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.195 Å) Cite: Structure of Legionella pneumophila macrodomain effector MavL in complex with ubiquitin vinyl methyl ester To Be Published

 

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