PDB: 73628 resultsInfo pagesStatus searchChemie searchBIRD

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3ZIU	Crystal structure of Mycoplasma mobile Leucyl-tRNA Synthetase with Leu-AMS in the active site Descriptor: 5'-O-(L-leucylsulfamoyl)adenosine, GLYCEROL, LEUCYL-TRNA SYNTHETASE Authors: Li, L, Palencia, A, Lukk, T, Li, Z, Luthey-Schulten, Z.A, Cusack, S, Martinis, S.A, Boniecki, M.T. Deposit date: 2013-01-10 Release date: 2013-02-27 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.07 Å) Cite: Leucyl-tRNA Synthetase Editing Domain Functions as a Molecular Rheostat to Control Codon Ambiguity in Mycoplasma Pathogens. Proc.Natl.Acad.Sci.USA, 110, 2013
3V0R	Crystal structure of Alternaria alternata allergen Alt a 1 Descriptor: 2,5,6-triaminopyrimidin-4-ol, 8-aminooctanoic acid, Major allergen Alt a 1, ... Authors: Chruszcz, M, Solberg, R, Osinski, T, Chapman, M.D, Minor, W. Deposit date: 2011-12-08 Release date: 2012-06-13 Last modified: 2022-04-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Alternaria alternata allergen Alt a 1: a unique beta-barrel protein dimer found exclusively in fungi. J.Allergy Clin.Immunol., 130, 2012
1VS3	Crystal Structure of the tRNA Pseudouridine Synthase TruA From Thermus thermophilus HB8 Descriptor: tRNA pseudouridine synthase A Authors: Dong, X, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-06-28 Release date: 2006-12-12 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Crystal structure of tRNA pseudouridine synthase TruA from Thermus thermophilus HB8. Rna Biol., 3, 2006
6UGG	Structure of unmodified E. coli tRNA(Asp) Descriptor: tRNAasp Authors: Chan, C.W, Mondragon, A. Deposit date: 2019-09-26 Release date: 2020-01-01 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs. Rna, 26, 2020
7XJZ	Cryo-EM strucrture of Oryza sativa plastid glycyl-tRNA synthetase in complex with tRNA (tRNA binding state) Descriptor: Glycine--tRNA ligase, tRNA(gly) Authors: Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J. Deposit date: 2022-04-19 Release date: 2023-05-03 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase. Nucleic Acids Res., 51, 2023
7XJY	Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase (apo form) Descriptor: Glycine--tRNA ligase Authors: Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J. Deposit date: 2022-04-19 Release date: 2023-05-03 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase. Nucleic Acids Res., 51, 2023
7XK1	Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase in complex with two tRNAs (both in tRNA binding states) Descriptor: Glycine--tRNA ligase, tRNA(gly) Authors: Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J. Deposit date: 2022-04-19 Release date: 2023-05-03 Last modified: 2023-05-24 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase. Nucleic Acids Res., 51, 2023
7XK0	Cryo-EM strucrture of Oryza sativa plastid glycyl-tRNA synthetase in complex with tRNA (tRNA locked state) Descriptor: Glycine--tRNA ligase, tRNA(gly) Authors: Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J. Deposit date: 2022-04-19 Release date: 2023-05-03 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (3.59 Å) Cite: Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase. Nucleic Acids Res., 51, 2023
2QUK	Crystal structures of human tryptophanyl-tRNA synthetase in complex with ATP(putative) Descriptor: Tryptophanyl-tRNA synthetase Authors: Shen, N, Ding, J.P. Deposit date: 2007-08-06 Release date: 2008-04-29 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Catalytic mechanism of the tryptophan activation reaction revealed by crystal structures of human tryptophanyl-tRNA synthetase in different enzymatic states Nucleic Acids Res., 36, 2008
6KQY	Crystal structure of human leucyl-tRNA synthetase, Leucine-bound form Descriptor: LEUCINE, Leucine--tRNA ligase, cytoplasmic, ... Authors: Kim, S, Son, J, Kim, S, Hwang, K.Y. Deposit date: 2019-08-20 Release date: 2021-01-27 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Leucine-sensing mechanism of leucyl-tRNA synthetase 1 for mTORC1 activation. Cell Rep, 35, 2021
6KR7	Crystal structure of methylated human leucyl-tRNA synthetase, Leu-AMS-bound form Descriptor: 5'-O-(L-leucylsulfamoyl)adenosine, LEUCINE, Leucine--tRNA ligase, ... Authors: Kim, S, Son, J, Kim, S, Hwang, K.Y. Deposit date: 2019-08-21 Release date: 2021-01-27 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (4 Å) Cite: Leucine-sensing mechanism of leucyl-tRNA synthetase 1 for mTORC1 activation. Cell Rep, 35, 2021
3TD2	Crystal structures of Peptidyl-tRNA hydrolase from Mycobacterium tuberculosis - Form 5 Descriptor: Peptidyl-tRNA hydrolase Authors: Selvaraj, M, Ahmad, R, Varshney, U, Vijayan, M. Deposit date: 2011-08-10 Release date: 2012-02-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structures of new crystal forms of Mycobacterium tuberculosis peptidyl-tRNA hydrolase and functionally important plasticity of the molecule Acta Crystallogr.,Sect.F, 68, 2012
3TCK	Crystal structure of Peptidyl-tRNA hydrolase from Mycobacterium tuberculosis - Form 4 Descriptor: Peptidyl-tRNA hydrolase Authors: Selvaraj, M, Ahmad, R, Varshney, U, Vijayan, M. Deposit date: 2011-08-09 Release date: 2012-02-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structures of new crystal forms of Mycobacterium tuberculosis peptidyl-tRNA hydrolase and functionally important plasticity of the molecule Acta Crystallogr.,Sect.F, 68, 2012
4RDX	Structure of histidinyl-tRNA synthetase in complex with tRNA(His) Descriptor: ADENOSINE MONOPHOSPHATE, HISTIDINE, Histidine--tRNA ligase, ... Authors: Xie, W, Tian, Q, Wang, C. Deposit date: 2014-09-20 Release date: 2015-03-25 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Structural basis for recognition of G-1-containing tRNA by histidyl-tRNA synthetase Nucleic Acids Res., 43, 2015
2IY5	PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS complexed with tRNA and a phenylalanyl-adenylate analog Descriptor: ADENOSINE-5'-[PHENYLALANINOL-PHOSPHATE], MAGNESIUM ION, PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN, ... Authors: Moor, N, Kotik-Kogan, O, Tworowski, D, Sukhanova, M, Safro, M. Deposit date: 2006-07-12 Release date: 2006-09-06 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (3.1 Å) Cite: The crystal structure of the ternary complex of phenylalanyl-tRNA synthetase with tRNAPhe and a phenylalanyl-adenylate analogue reveals a conformational switch of the CCA end. Biochemistry, 45, 2006
8H1C	Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase in complex with two tRNAs (one in tRNA binding state and the other in tRNA locked state) Descriptor: Glycine--tRNA ligase, tRNA(gly) (74-MER) Authors: Yu, Z, Wu, Z, Li, Y, Lu, G, Lin, J. Deposit date: 2022-10-02 Release date: 2023-04-26 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structural basis of a two-step tRNA recognition mechanism for plastid glycyl-tRNA synthetase. Nucleic Acids Res., 51, 2023
5H34	Crystal structure of the C-terminal domain of methionyl-tRNA synthetase (MetRS-C) in Nanoarchaeum equitans Descriptor: Methionine-tRNA ligase Authors: Suzuki, H, Kaneko, A, Yamamoto, T, Nambo, M, Umehara, T, Yoshida, H, Park, S.Y, Tamura, K. Deposit date: 2016-10-20 Release date: 2017-06-21 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.748 Å) Cite: Binding Properties of Split tRNA to the C-terminal Domain of Methionyl-tRNA Synthetase of Nanoarchaeum equitans. J. Mol. Evol., 84, 2017
1QRT	GLUTAMINYL-TRNA SYNTHETASE MUTANT D235G COMPLEXED WITH GLUTAMINE TRANSFER RNA Descriptor: ADENOSINE-5'-TRIPHOSPHATE, PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)), TRNAGLN2 Authors: Arnez, J.G, Steitz, T.A. Deposit date: 1996-06-14 Release date: 1996-12-07 Last modified: 2021-11-03 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal structures of three misacylating mutants of Escherichia coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP. Biochemistry, 35, 1996
1QRS	GLUTAMINYL-TRNA SYNTHETASE MUTANT D235N COMPLEXED WITH GLUTAMINE TRANSFER RNA Descriptor: ADENOSINE-5'-TRIPHOSPHATE, PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)), TRNAGLN2 Authors: Arnez, J.G, Steitz, T.A. Deposit date: 1996-06-14 Release date: 1996-12-07 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structures of three misacylating mutants of Escherichia coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP. Biochemistry, 35, 1996
1QRU	GLUTAMINYL-TRNA SYNTHETASE MUTANT I129T COMPLEXED WITH GLUTAMINE TRANSFER RNA Descriptor: ADENOSINE-5'-TRIPHOSPHATE, PROTEIN (GLUTAMINYL-TRNA SYNTHETASE (E.C.6.1.1.18)), TRNAGLN2 Authors: Arnez, J.G, Steitz, T.A. Deposit date: 1996-06-14 Release date: 1996-12-07 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystal structures of three misacylating mutants of Escherichia coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP. Biochemistry, 35, 1996
2RKJ	Cocrystal structure of a tyrosyl-tRNA synthetase splicing factor with a group I intron RNA Descriptor: RNA (238-MER), RNA (5'-R(P*GP*CP*UP*U)-3'), Tyrosyl-tRNA synthetase Authors: Paukstelis, P.J, Chen, J.-H, Chase, E, Lambowitz, A.M, Golden, B.L. Deposit date: 2007-10-16 Release date: 2008-01-08 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (4.5 Å) Cite: Structure of a tyrosyl-tRNA synthetase splicing factor bound to a group I intron RNA. Nature, 451, 2008
1QU2	INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN Descriptor: ISOLEUCYL-TRNA, ISOLEUCYL-TRNA SYNTHETASE, MAGNESIUM ION, ... Authors: Silvian, L.F, Wang, J, Steitz, T.A. Deposit date: 1999-07-06 Release date: 1999-08-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Insights into editing from an ile-tRNA synthetase structure with tRNAile and mupirocin. Science, 285, 1999
1N78	Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with tRNA(Glu) and glutamol-AMP. Descriptor: GLUTAMOL-AMP, Glutamyl-tRNA synthetase, MAGNESIUM ION, ... Authors: Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2002-11-13 Release date: 2003-02-25 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding EMBO J., 22, 2003
1A9L	SOLUTION STRUCTURE OF A SUBSTRATE FOR THE ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES: THE BULGE-HELIX-BULGE MOTIF, NMR, 12 STRUCTURES Descriptor: PRE-TRNA BULGE-HELIX-BULGE MOTIF Authors: Diener, J.L, Moore, P.B. Deposit date: 1998-04-07 Release date: 1998-06-17 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of a substrate for the archaeal pre-tRNA splicing endonucleases: the bulge-helix-bulge motif. Mol.Cell, 1, 1998
1N77	Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with tRNA(Glu) and ATP. Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Glutamyl-tRNA synthetase, MAGNESIUM ION, ... Authors: Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2002-11-13 Release date: 2003-02-25 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.4 Å) Cite: ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding EMBO J., 22, 2003

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