Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2PKV
DownloadVisualize
BU of 2pkv by Molmil
D-(GGTATACC) ambient pressure
Descriptor: 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3'
Authors:Girard, E, Prange, T, Kahn, R, Fourme, R.
Deposit date:2007-04-18
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
5O7V
DownloadVisualize
BU of 5o7v by Molmil
Crystal structure of the 5F-tryptophan RSL lectin in complex with Lewis x tetrasaccharide
Descriptor: CHLORIDE ION, ETHANOL, Fucose-binding lectin protein, ...
Authors:Varrot, A.
Deposit date:2017-06-09
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Effect of Noncanonical Amino Acids on Protein-Carbohydrate Interactions: Structure, Dynamics, and Carbohydrate Affinity of a Lectin Engineered with Fluorinated Tryptophan Analogs.
ACS Chem. Biol., 13, 2018
5O7W
DownloadVisualize
BU of 5o7w by Molmil
Crystal structure of the 4-FLUORO RSL lectin in complex with Lewis x tetrasaccharide
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Putative fucose-binding lectin protein, ...
Authors:Varrot, A.
Deposit date:2017-06-09
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Effect of Noncanonical Amino Acids on Protein-Carbohydrate Interactions: Structure, Dynamics, and Carbohydrate Affinity of a Lectin Engineered with Fluorinated Tryptophan Analogs.
ACS Chem. Biol., 13, 2018
1J41
DownloadVisualize
BU of 1j41 by Molmil
Direct observation of photolysis-induced tertiary structural changes in human haemoglobin; Crystal structure of alpha(Ni)-beta(Fe) hemoglobin (laser photolysed)
Descriptor: BUT-2-ENEDIAL, CARBON MONOXIDE, Hemoglobin alpha Chain, ...
Authors:Adachi, S, Park, S.-Y, Tame, J.R.H, Shiro, Y, Shibayama, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-02-21
Release date:2003-07-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Direct observation of photolysis-induced tertiary structural changes in hemoglobin
Proc.Natl.Acad.Sci.USA, 100, 2003
1DOF
DownloadVisualize
BU of 1dof by Molmil
THE CRYSTAL STRUCTURE OF ADENYLOSUCCINATE LYASE FROM PYROBACULUM AEROPHILUM: INSIGHTS INTO THERMAL STABILITY AND HUMAN PATHOLOGY
Descriptor: ADENYLOSUCCINATE LYASE
Authors:Toth, E.A, Yeates, T.O, Goedken, E, Dixon, J.E, Marqusee, S.
Deposit date:1999-12-20
Release date:2001-01-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of adenylosuccinate lyase from Pyrobaculum aerophilum reveals an intracellular protein with three disulfide bonds.
J.Mol.Biol., 301, 2000
5O8P
DownloadVisualize
BU of 5o8p by Molmil
The crystal structure of DfoA bound to FAD, the desferrioxamine biosynthetic pathway cadaverine monooxygenase from the fire blight disease pathogen Erwinia amylovora
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-lysine 6-monooxygenase involved in desferrioxamine biosynthesis
Authors:Salomone-Stagni, M, Bartho, J.D, Polsinelli, I, Bellini, D, Walsh, M.A, Demitri, N, Benini, S.
Deposit date:2017-06-14
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A complete structural characterization of the desferrioxamine E biosynthetic pathway from the fire blight pathogen Erwinia amylovora.
J.Struct.Biol., 202, 2018
2PLB
DownloadVisualize
BU of 2plb by Molmil
D(GTATACC) under hydrostatic pressure of 1.39 GPa
Descriptor: 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3', SPERMINE
Authors:Prange, T, Girard, E, Kahn, R, Fourme, R.
Deposit date:2007-04-19
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
5OQG
DownloadVisualize
BU of 5oqg by Molmil
Crystal structure of a single chain trimer composed of the MHC I heavy chain H-2Kb W167A, beta-2microglobulin, and and ovalbumin-derived peptide.
Descriptor: Beta-2-microglobulin,H-2 class I histocompatibility antigen, K-B alpha chain
Authors:Mikolajek, H, Werner, J.M.
Deposit date:2017-08-11
Release date:2018-04-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The partial dissociation of MHC class I-bound peptides exposes their N terminus to trimming by endoplasmic reticulum aminopeptidase 1.
J. Biol. Chem., 293, 2018
2ECS
DownloadVisualize
BU of 2ecs by Molmil
Lambda Cro mutant Q27P/A29S/K32Q at 1.4 A in space group C2
Descriptor: ACETATE ION, CHLORIDE ION, LITHIUM ION, ...
Authors:Hall, B.M, Roberts, S.A, Cordes, M.H.
Deposit date:2007-02-14
Release date:2008-01-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Two structures of a lambda Cro variant highlight dimer flexibility but disfavor major dimer distortions upon specific binding of cognate DNA.
J.Mol.Biol., 375, 2008
2NVB
DownloadVisualize
BU of 2nvb by Molmil
Contribution of Pro275 to the Thermostability of the Alcohol Dehydrogenases (ADHs)
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-dependent alcohol dehydrogenase, ZINC ION
Authors:Goihberg, E, Tel-Or, S, Peretz, M, Frolow, F, Dym, O, Burstein, Y, Israel Structural Proteomics Center (ISPC)
Deposit date:2006-11-12
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Thermal stabilization of the protozoan Entamoeba histolytica alcohol dehydrogenase by a single proline substitution
Proteins, 72, 2008
5OH1
DownloadVisualize
BU of 5oh1 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Aminoglutethimide
Descriptor: (3~{R})-3-(4-aminophenyl)-3-ethyl-piperidine-2,6-dione, Cereblon isoform 4, S-Thalidomide, ...
Authors:Boichenko, I, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B, Hartmann, M.D.
Deposit date:2017-07-14
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Chemical Ligand Space of Cereblon.
Acs Omega, 3, 2018
2PJJ
DownloadVisualize
BU of 2pjj by Molmil
E. coli lytic transglycosylase MltA-D308A in apo-1 form
Descriptor: Membrane-bound lytic murein transglycosylase A
Authors:van Straaten, K.E, Dijkstra, B.W, Thunnissen, A.M.W.H.
Deposit date:2007-04-16
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
2P7O
DownloadVisualize
BU of 2p7o by Molmil
Crystal structure of genomically encoded fosfomycin resistance protein, FosX, from Listeria monocytogenes (tetragonal form)
Descriptor: Glyoxalase family protein, MANGANESE (II) ION
Authors:Fillgrove, K.L, Pakhomova, S, Schaab, M, Newcomer, M.E, Armstrong, R.N.
Deposit date:2007-03-20
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structure and Mechanism of the Genomically Encoded Fosfomycin Resistance Protein, FosX, from Listeria monocytogenes.
Biochemistry, 46, 2007
1GKR
DownloadVisualize
BU of 1gkr by Molmil
L-Hydantoinase (Dihydropyrimidinase) from Arthrobacter aurescens
Descriptor: NON-ATP DEPENDENT L-SELECTIVE HYDANTOINASE, ZINC ION
Authors:Abendroth, J, Niefind, K, Schomburg, D.
Deposit date:2001-08-20
Release date:2002-07-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure of L-hydantoinase from Arthobacter aurescens leads to an understanding of dihydropyrimidinase substrate and enantio specificity.
Biochemistry, 41, 2002
2PF8
DownloadVisualize
BU of 2pf8 by Molmil
Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution is equal to concentration of IDD594.
Descriptor: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ...
Authors:Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A.
Deposit date:2007-04-04
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Crystal packing modifies ligand binding affinity: The case of aldose reductase.
Proteins, 80, 2012
2PL4
DownloadVisualize
BU of 2pl4 by Molmil
D-(GGTATACC) under 0.55 GPa hydrostatic pressure
Descriptor: Synthetic DNA octamer
Authors:Prange, T, Girard, E, Kahn, R, Fourme, R.
Deposit date:2007-04-19
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
1GBU
DownloadVisualize
BU of 1gbu by Molmil
DEOXY (BETA-(C93A,C112G)) HUMAN HEMOGLOBIN
Descriptor: HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Vasquez, G.B, Ji, X, Fronticelli, C, Gilliland, G.L.
Deposit date:1996-01-04
Release date:1997-01-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cysteines beta93 and beta112 as probes of conformational and functional events at the human hemoglobin subunit interfaces.
Biophys.J., 76, 1999
3BGX
DownloadVisualize
BU of 3bgx by Molmil
E. coli Thymidylate Synthase C146S mutant complexed with dTMP and MTF
Descriptor: N-({4-[(6aR)-3-amino-1-oxo-1,2,5,6,6a,7-hexahydroimidazo[1,5-f]pteridin-8(9H)-yl]phenyl}carbonyl)-L-glutamic acid, SULFATE ION, THYMIDINE-5'-PHOSPHATE, ...
Authors:Roberts, S.A, Montfort, W.R.
Deposit date:2007-11-27
Release date:2008-12-09
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural Studies of Early Events in Catalysis by Thymidylate Synthase
To be Published
1HIY
DownloadVisualize
BU of 1hiy by Molmil
Binding of nucleotides to NDP kinase
Descriptor: 3'-DEOXY 3'-AMINO ADENOSINE-5'-DIPHOSPHATE, NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Cervoni, L, Lascu, I, Xu, Y, Gonin, P, Morr, M, Merouani, M, Janin, J, Giartoso, A.
Deposit date:2001-01-05
Release date:2001-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Binding of Nucleotides to Nucleoside Diphosphate Kinase: A Calorimetric Study.
Biochemistry, 40, 2001
2PFH
DownloadVisualize
BU of 2pfh by Molmil
Complex of Aldose Reductase with NADP+ and simaltaneously bound competetive inhibitors Fidarestat and IDD594. Concentration of Fidarestat in soaking solution is less than concentration of IDD594.
Descriptor: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE, Aldose reductase, CHLORIDE ION, ...
Authors:Petrova, T, Hazemann, I, Cousido, A, Mitschler, A, Ginell, S, Joachimiak, A, Podjarny, A.
Deposit date:2007-04-05
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Crystal packing modifies ligand binding affinity: The case of aldose reductase.
Proteins, 80, 2012
2PL8
DownloadVisualize
BU of 2pl8 by Molmil
D(GTATACC) under hydrostatic pressure of 1.04 GPa
Descriptor: 5'-D(*DGP*DGP*DTP*DAP*DTP*DAP*DCP*DC)-3', SPERMINE
Authors:Prange, T, Girard, E, Fourme, R, Kahn, R.
Deposit date:2007-04-19
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
2PXW
DownloadVisualize
BU of 2pxw by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.4 A Resolution (Transition State)
Descriptor: GFP-like fluorescent chromoprotein FP506
Authors:Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-05-14
Release date:2007-09-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
1LA2
DownloadVisualize
BU of 1la2 by Molmil
Structural analysis of Saccharomyces cerevisiae myo-inositol phosphate synthase
Descriptor: Myo-inositol-1-phosphate synthase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kniewel, R, Buglino, J.A, Shen, V, Chadna, T, Beckwith, A, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2002-03-27
Release date:2002-04-10
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural analysis of Saccharomyces cerevisiae myo-inositol phosphate synthase
J.STRUCT.FUNCT.GENOM., 2, 2002
2P53
DownloadVisualize
BU of 2p53 by Molmil
Crystal structure of N-acetyl-D-glucosamine-6-phosphate deacetylase D273N mutant complexed with N-acetyl phosphonamidate-d-glucosamine-6-phosphate
Descriptor: 2-deoxy-2-{[(S)-hydroxy(methyl)phosphoryl]amino}-6-O-phosphono-alpha-D-glucopyranose, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Hall, R.S, Raushel, F.M, Almo, S.C.
Deposit date:2007-03-14
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Diversity within the Mononuclear and Binuclear Active Sites of N-Acetyl-d-glucosamine-6-phosphate Deacetylase.
Biochemistry, 46, 2007
1J3Z
DownloadVisualize
BU of 1j3z by Molmil
Direct observation of photolysis-induced tertiary structural changes in human haemoglobin; Crystal structure of alpha(Fe-CO)-beta(Ni) hemoglobin (laser unphotolysed)
Descriptor: BUT-2-ENEDIAL, CARBON MONOXIDE, Hemoglobin alpha Chain, ...
Authors:Adachi, S, Park, S.-Y, Tame, J.R.H, Shiro, Y, Shibayama, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-02-21
Release date:2003-07-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Direct observation of photolysis-induced tertiary structural changes in hemoglobin
Proc.Natl.Acad.Sci.USA, 100, 2003

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon