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3INM
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BU of 3inm by Molmil
Crystal structure of human cytosolic NADP(+)-dependent isocitrate dehydrogenase R132H mutant in complex with NADPH, ALPHA-KETOGLUTARATE and CALCIUM(2+)
Descriptor: 2-OXOGLUTARIC ACID, CALCIUM ION, GLYCEROL, ...
Authors:Fontano, E, Brown, R.S, Suto, R.K, Bhyravbhatla, B.
Deposit date:2009-08-12
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cancer-associated IDH1 mutations produce 2-hydroxyglutarate.
Nature, 462, 2009
3QZ7
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BU of 3qz7 by Molmil
T-3 ternary complex of Dpo4
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*GP*GP*G)-3', 5'-D(*TP*TP*AP*CP*GP*CP*CP*TP*CP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ...
Authors:Pata, J.D, Wu, Y, Wilson, R.C.
Deposit date:2011-03-04
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:The y-family DNA polymerase dpo4 uses a template slippage mechanism to create single-base deletions.
J.Bacteriol., 193, 2011
4XW5
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BU of 4xw5 by Molmil
X-ray structure of PKAc with ATP, CP20, calcium ions
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Gerlits, O, Tian, J, Das, A, Taylor, S, Langan, P, Heller, T.W, Kovalevsky, A.
Deposit date:2015-01-28
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Phosphoryl Transfer Reaction Snapshots in Crystals: INSIGHTS INTO THE MECHANISM OF PROTEIN KINASE A CATALYTIC SUBUNIT.
J.Biol.Chem., 290, 2015
3QZ8
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BU of 3qz8 by Molmil
TT-4 ternary complex of Dpo4
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*AP*GP*G)-3', 5'-D(*TP*TP*AP*CP*GP*CP*CP*TP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ...
Authors:Pata, J.D, Wu, Y, Wilson, R.C.
Deposit date:2011-03-04
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:The y-family DNA polymerase dpo4 uses a template slippage mechanism to create single-base deletions.
J.Bacteriol., 193, 2011
2XAD
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BU of 2xad by Molmil
Crystal structure of deacetylase-teicoplanin complex in biosynthesis pathway of teicoplanin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, 8-METHYLNONANOIC ACID, ...
Authors:Chan, H.C, Huang, Y.T, Lyu, S.Y, Huang, C.J, Li, Y.S, Liu, Y.C, Chou, C.C, Tsai, M.D, Li, T.L.
Deposit date:2010-03-31
Release date:2011-03-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Regioselective Deacetylation Based on Teicoplanin-Complexed Orf2 Crystal Structures.
Mol.Biosyst., 7, 2011
6A6M
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BU of 6a6m by Molmil
Crystal structure of an outward-open nucleotide-bound state of the eukaryotic ABC multidrug transporter CmABCB1
Descriptor: ATP-binding cassette, sub-family B, member 1, ...
Authors:Kato, H, Nakatsu, T, Kodan, A.
Deposit date:2018-06-28
Release date:2019-02-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Inward- and outward-facing X-ray crystal structures of homodimeric P-glycoprotein CmABCB1.
Nat Commun, 10, 2019
1TZI
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BU of 1tzi by Molmil
Crystal Structure of the Fab YADS2 Complexed with h-VEGF
Descriptor: Fab YADS2 Heavy Chain, Fab YADS2 Light Chain, Vascular endothelial growth factor A
Authors:Fellouse, F.A, Wiesmann, C, Sidhu, S.S.
Deposit date:2004-07-10
Release date:2004-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Synthetic antibodies from a four-amino-acid code: A dominant role for tyrosine in antigen recognition
Proc.Natl.Acad.Sci.USA, 101, 2004
1AFX
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BU of 1afx by Molmil
UGAA EUKARYOTIC RIBOSOMAL RNA TETRALOOP, NMR, 13 STRUCTURES
Descriptor: RNA (5'-R(*GP*GP*UP*GP*UP*GP*AP*AP*CP*AP*CP*C)-3')
Authors:Butcher, S.E, Dieckmann, T, Feigon, J.
Deposit date:1997-03-15
Release date:1997-05-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the loop B domain from the hairpin ribozyme.
Nat.Struct.Biol., 6, 1999
1F60
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BU of 1f60 by Molmil
CRYSTAL STRUCTURE OF THE YEAST ELONGATION FACTOR COMPLEX EEF1A:EEF1BA
Descriptor: ELONGATION FACTOR EEF1A, ELONGATION FACTOR EEF1BA
Authors:Andersen, G.R, Pedersen, L, Valente, L, Kinzy, T.G, Nyborg, J.
Deposit date:2000-06-19
Release date:2000-07-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural basis for nucleotide exchange and competition with tRNA in the yeast elongation factor complex eEF1A:eEF1Balpha.
Mol.Cell, 6, 2000
2VHZ
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BU of 2vhz by Molmil
Crystal structure of holo L-alanine dehydrogenase from Mycobacterium tuberculosis in the closed conformation
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ALANINE DEHYDROGENASE
Authors:Agren, D, Schneider, G.
Deposit date:2007-11-26
Release date:2008-03-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding.
J.Mol.Biol., 377, 2008
2VHW
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BU of 2vhw by Molmil
Crystal structure of holo L-alanine dehydrogenase from Mycobacterium tuberculosis in the open and closed conformation
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ALANINE DEHYDROGENASE, MAGNESIUM ION
Authors:Agren, D, Schneider, G.
Deposit date:2007-11-26
Release date:2008-03-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding.
J.Mol.Biol., 377, 2008
1TTF
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BU of 1ttf by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF THE TENTH TYPE III MODULE OF FIBRONECTIN: AN INSIGHT INTO RGD-MEDIATED INTERACTIONS
Descriptor: FIBRONECTIN
Authors:Main, A.L, Harvey, T.S, Baron, M, Campbell, I.D.
Deposit date:1993-07-14
Release date:1994-01-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The three-dimensional structure of the tenth type III module of fibronectin: an insight into RGD-mediated interactions.
Cell(Cambridge,Mass.), 71, 1992
1KQK
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BU of 1kqk by Molmil
Solution Structure of the N-terminal Domain of a Potential Copper-translocating P-type ATPase from Bacillus subtilis in the Cu(I)loaded State
Descriptor: COPPER (I) ION, POTENTIAL COPPER-TRANSPORTING ATPASE
Authors:Banci, L, Bertini, I, Ciofi-Baffoni, S, D'Onofrio, M, Gonnelli, L, Marhuenda-Egea, F.C, Ruiz-Duenas, F.J.
Deposit date:2002-01-07
Release date:2002-04-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal domain of a potential copper-translocating P-type ATPase from Bacillus subtilis in the apo and Cu(I) loaded states.
J.Mol.Biol., 317, 2002
1TTG
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BU of 1ttg by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF THE TENTH TYPE III MODULE OF FIBRONECTIN: AN INSIGHT INTO RGD-MEDIATED INTERACTIONS
Descriptor: FIBRONECTIN
Authors:Main, A.L, Harvey, T.S, Baron, M, Campbell, I.D.
Deposit date:1993-07-14
Release date:1994-01-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The three-dimensional structure of the tenth type III module of fibronectin: an insight into RGD-mediated interactions.
Cell(Cambridge,Mass.), 71, 1992
2VHY
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BU of 2vhy by Molmil
Crystal structure of apo L-alanine dehydrogenase from Mycobacterium tuberculosis
Descriptor: ALANINE DEHYDROGENASE
Authors:Agren, D, Schneider, G.
Deposit date:2007-11-26
Release date:2008-03-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Three-Dimensional Structures of Apo- and Holo-L-Alanine Dehydrogenase from Mycobacterium Tuberculosis Reveal Conformational Changes Upon Coenzyme Binding.
J.Mol.Biol., 377, 2008
6PUC
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BU of 6puc by Molmil
Structure of human MAIT A-F7 TCR in complex with human MR1-5-OP-RU
Descriptor: 1-deoxy-1-({2,6-dioxo-5-[(E)-(2-oxopropylidene)amino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, Beta-2-microglobulin, CHLORIDE ION, ...
Authors:Awad, W, Rossjohn, J.
Deposit date:2019-07-18
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The molecular basis underpinning the potency and specificity of MAIT cell antigens.
Nat.Immunol., 21, 2020
3IFD
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BU of 3ifd by Molmil
Human synthetic monocyte chemoattractant protein 1 (MCP-1)
Descriptor: C-C motif chemokine 2, PHOSPHATE ION, POTASSIUM ION
Authors:Teplyakov, A, Obmolova, G, Gilliland, G.L.
Deposit date:2009-07-24
Release date:2009-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthesis by native chemical ligation and crystal structure of human CCL2.
Biopolymers, 94, 2010
6PUS
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BU of 6pus by Molmil
Human TRPM2 bound to ADPR and calcium
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CALCIUM ION, Transient receptor potential cation channel subfamily M member 2
Authors:Du, J, Lu, W, Huang, Y.
Deposit date:2019-07-18
Release date:2019-09-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Ligand recognition and gating mechanism through three ligand-binding sites of human TRPM2 channel.
Elife, 8, 2019
1L5V
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BU of 1l5v by Molmil
Crystal Structure of the Maltodextrin Phosphorylase complexed with Glucose-1-phosphate
Descriptor: 1-O-phosphono-alpha-D-glucopyranose, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MALTODEXTRIN PHOSPHORYLASE, ...
Authors:Geremia, S, Campagnolo, M, Schinzel, R, Johnson, L.N.
Deposit date:2002-03-08
Release date:2002-04-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Enzymatic catalysis in crystals of Escherichia coli maltodextrin phosphorylase
J.Mol.Biol., 322, 2002
2UY6
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BU of 2uy6 by Molmil
Crystal structure of the P pilus rod subunit PapA
Descriptor: PAP FIMBRIAL MAJOR PILIN PROTEIN, PERIPLASMID CHAPERONE PAPD PROTEIN
Authors:Verger, D, Bullitt, E, Hultgren, S.J, Waksman, G.
Deposit date:2007-04-02
Release date:2007-05-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the P Pilus Rod Subunit Papa.
Plos Pathog., 3, 2007
1QS2
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BU of 1qs2 by Molmil
CRYSTAL STRUCTURE OF VIP2 WITH NAD
Descriptor: ADP-RIBOSYLTRANSFERASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Han, S, Craig, J.A, Putnam, C.D, Carozzi, N.B, Tainer, J.A.
Deposit date:1999-06-25
Release date:1999-12-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Evolution and mechanism from structures of an ADP-ribosylating toxin and NAD complex.
Nat.Struct.Biol., 6, 1999
3O6L
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BU of 3o6l by Molmil
Anti-Tat HIV 11H6H1 Fab' complexed with a 15-mer Tat peptide
Descriptor: 11H6H1 Fab' heavy chain, 11H6H1 Fab' light chain, Protein Tat 15-mer peptide
Authors:Serriere, J, Gouet, P, Guillon, C.
Deposit date:2010-07-29
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fab'-induced folding of antigenic N-terminal peptides from intrinsically disordered HIV-1 Tat revealed by X-ray crystallography.
J.Mol.Biol., 405, 2011
1L8S
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BU of 1l8s by Molmil
CARBOXYLIC ESTER HYDROLASE COMPLEX (DIMERIC PLA2 + LPC-ether + ACETATE + PHOSPHATE IONS)
Descriptor: 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ACETATE ION, CALCIUM ION, ...
Authors:Pan, Y.H, Bahnson, B.J.
Deposit date:2002-03-21
Release date:2002-12-25
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of phospholipase A2 Complex with the Hydrolysis Products of Platelet Activating Factor: Equilibrium Binding of Fatty Acid and Lysophospholipid-ether at the Active Site may be Mutually Exclusive
Biochemistry, 41, 2002
6PUR
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BU of 6pur by Molmil
Human TRPM2 bound to ADPR
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Transient receptor potential cation channel subfamily M member 2
Authors:Du, J, Lu, W, Huang, Y.
Deposit date:2019-07-18
Release date:2019-09-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Ligand recognition and gating mechanism through three ligand-binding sites of human TRPM2 channel.
Elife, 8, 2019
6PVR
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BU of 6pvr by Molmil
Influenza B M2 Proton Channel in the Closed State - SSNMR Structure at pH 7.5
Descriptor: BM2 protein
Authors:Mandala, V.S, Loftis, A.R, Shcherbakov, A.S, Pentelute, B.L, Hong, M.
Deposit date:2019-07-21
Release date:2020-02-05
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:Atomic structures of closed and open influenza B M2 proton channel reveal the conduction mechanism.
Nat.Struct.Mol.Biol., 27, 2020

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