Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5B47
DownloadVisualize
BU of 5b47 by Molmil
2-Oxoacid:Ferredoxin Oxidoreductase 2 from Sulfolobus tokodai - pyruvate complex
Descriptor: 2-oxoacid--ferredoxin oxidoreductase alpha subunit, 2-oxoacid--ferredoxin oxidoreductase beta subunit, IRON/SULFUR CLUSTER, ...
Authors:Yan, Z, Maruyama, A, Arakawa, T, Fushinobu, S, Wakagi, T.
Deposit date:2016-04-01
Release date:2016-09-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of archaeal 2-oxoacid:ferredoxin oxidoreductases from Sulfolobus tokodaii
Sci Rep, 6, 2016
5XB8
DownloadVisualize
BU of 5xb8 by Molmil
Crystal structure of dibenzothiophene monooxygenase (TdsC) from Paenibacillus sp. A11-2
Descriptor: SULFATE ION, Thermophilic dibenzothiophene desulfurization enzyme C
Authors:Hino, T, Hamamoto, H, Ohshiro, T, Nagano, S.
Deposit date:2017-03-16
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.
J. Biol. Chem., 292, 2017
8C3N
DownloadVisualize
BU of 8c3n by Molmil
Stapled peptide SP30 in complex with humanised RadA mutant HumRadA22
Descriptor: 4,6-diethylpyrimidin-2-amine, ADENOSINE-5'-DIPHOSPHATE, Breast cancer type 2 susceptibility protein, ...
Authors:Pantelejevs, T, Hyvonen, M.
Deposit date:2022-12-27
Release date:2023-03-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:A recombinant approach for stapled peptide discovery yields inhibitors of the RAD51 recombinase.
Chem Sci, 14, 2023
8HOU
DownloadVisualize
BU of 8hou by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87A-T268V in complex with Im-N-C4-Phe-Phe
Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, Im-N-C4-Phe-Phe, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jiang, Y, Dong, S, Feng, Y, Cong, Z.
Deposit date:2022-12-10
Release date:2023-12-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Anchoring a Structurally Editable Proximal Cofactor-like Module to Construct an Artificial Dual-center Peroxygenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8OXT
DownloadVisualize
BU of 8oxt by Molmil
CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) H251A VARIANT COMPLEXED WITH N-ACETYLANTHRANILATE AS RESULT OF IN CRYSTALLO TURNOVER OF ITS NATURAL SUBSTRATE 1-H-3-HYDROXY-4- OXOQUINALDINE UNDER HYPEROXIC CONDITIONS
Descriptor: 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase, 2-(ACETYLAMINO)BENZOIC ACID, GLYCEROL, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2023-05-02
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Evolutionary adaptation from hydrolytic to oxygenolytic catalysis at the alpha / beta-hydrolase fold.
Chem Sci, 14, 2023
8HOT
DownloadVisualize
BU of 8hot by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87A in complex with NH2-C7-Phe-Phe
Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, NH2-C7-Phe-Phe, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jiang, Y, Dong, S, Feng, Y, Cong, Z.
Deposit date:2022-12-10
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of the P450 BM3 heme domain mutant F87A in complex with NH2-C7-Phe-Phe
To Be Published
8HOP
DownloadVisualize
BU of 8hop by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87A in complex with Im-C6-Nap-Tyr
Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, Im-C6-Nap-Tyr, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jiang, Y, Dong, S, Feng, Y, Cong, Z.
Deposit date:2022-12-10
Release date:2023-12-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Anchoring a Structurally Editable Proximal Cofactor-like Module to Construct an Artificial Dual-center Peroxygenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
5XDD
DownloadVisualize
BU of 5xdd by Molmil
Crystal structure of tertiary complex of TdsC from Paenibacillus sp. A11-2 with FMN and Indole
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, INDOLE, ...
Authors:Hino, T, Hamamoto, H, Ohshiro, T, Nagano, S.
Deposit date:2017-03-28
Release date:2017-08-09
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.
J. Biol. Chem., 292, 2017
8HON
DownloadVisualize
BU of 8hon by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87A in complex with Im-C6-Tyr-Tyr
Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, Im-C6-Tyr-Tyr, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jiang, Y, Dong, S, Feng, Y, Cong, Z.
Deposit date:2022-12-10
Release date:2023-12-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Anchoring a Structurally Editable Proximal Cofactor-like Module to Construct an Artificial Dual-center Peroxygenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
6UNN
DownloadVisualize
BU of 6unn by Molmil
The crystal structure of 4-methoxycinnamic acid-bound CYP199A4
Descriptor: (E)-3-(4-methoxyphenyl)acrylic acid, CHLORIDE ION, CYP199A4, ...
Authors:Doherty, Z.D, Bell, S.G, Bruning, J.
Deposit date:2019-10-13
Release date:2020-10-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.655 Å)
Cite:The crystal structure of 4-methoxycinnamic acid-bound CYP199A4
To Be Published
6TUS
DownloadVisualize
BU of 6tus by Molmil
human XPG, Apo2 form
Descriptor: DNA repair protein complementing XP-G cells,DNA repair protein complementing XP-G cells, GLYCEROL, SULFATE ION
Authors:Ruiz, F.M, Fernandez-Tornero, C.
Deposit date:2020-01-08
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of human XPG, the xeroderma pigmentosum group G endonuclease, provides insight into nucleotide excision DNA repair.
Nucleic Acids Res., 48, 2020
5B7P
DownloadVisualize
BU of 5b7p by Molmil
Structures and functional analysis of periplasmic 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Aeromonas hydrophila
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, MTA/SAH nucleosidase
Authors:Xu, Y.
Deposit date:2016-06-08
Release date:2016-12-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila.
Biochemistry, 56, 2017
8OPV
DownloadVisualize
BU of 8opv by Molmil
Structure of Mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with Resveratrol (Fragment-B-H11)
Descriptor: 3-hydroxyacyl-CoA dehydrogenase, GLYCEROL, Putative acyltransferase Rv0859, ...
Authors:Dalwani, S, Wierenga, R.K, Venkatesan, R.
Deposit date:2023-04-10
Release date:2024-01-24
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystallographic fragment-binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate-channeling path between them.
Acta Crystallogr D Struct Biol, 80, 2024
8OQU
DownloadVisualize
BU of 8oqu by Molmil
Structure of Mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with Fragment-M-92
Descriptor: 3-hydroxyacyl-CoA dehydrogenase, 4-chloranylbenzenesulfonic acid, GLYCEROL, ...
Authors:Dalwani, S, Wierenga, R.K, Venkatesan, R.
Deposit date:2023-04-12
Release date:2024-01-24
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Crystallographic fragment-binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate-channeling path between them.
Acta Crystallogr D Struct Biol, 80, 2024
8OVB
DownloadVisualize
BU of 8ovb by Molmil
Human Complement C3b in complex with Trypanosoma brucei ISG65.
Descriptor: Complement C3, Complement C3f fragment, ISG65 G
Authors:Cook, A.D, Higgins, M.K.
Deposit date:2023-04-25
Release date:2024-02-14
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular mechanism of complement inhibition by the trypanosome receptor ISG65.
Elife, 12, 2024
8PDD
DownloadVisualize
BU of 8pdd by Molmil
Thioredoxin glutathione reductase of Schistosoma mansoni at 1.25A resolution.
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, MAGNESIUM ION, ...
Authors:Ribeiro, L, Montoya, B.O, Moreira-Filho, J.T, Bowyer, S, Verma, A, Neves, B.J, Owens, R.J, Andrade, C.H, Silva-Jr, F.P, Furnham, N.
Deposit date:2023-06-12
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Fragment library screening by X-ray crystallography and binding site analysis on thioredoxin glutathione reductase of Schistosoma mansoni.
Sci Rep, 14, 2024
6TVI
DownloadVisualize
BU of 6tvi by Molmil
Salmonella typhimurium mutant neuraminidase (D100S)+ DANA
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, GLYCEROL, Sialidase
Authors:Garman, E.F, Salinger, M.T, Murray, J.W, Laver, W.G, Kuhn, P, Vimr, E.R.
Deposit date:2020-01-09
Release date:2020-02-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1 Å)
Cite:Salmonella typhimurium mutant neuraminidase (D100S)+ DANA
To Be Published
8HPG
DownloadVisualize
BU of 8hpg by Molmil
Crystal structure of phenylpyruvate reductase from Lactobacillus sp. CGMCC 9967
Descriptor: Phenylpyruvate reductase
Authors:Yang, J.H, Song, W.
Deposit date:2022-12-12
Release date:2023-12-20
Method:X-RAY DIFFRACTION (3.895 Å)
Cite:One-Pot Biocatalytic Transformation of L-DOPA to D-Danshensu
To Be Published
6TW4
DownloadVisualize
BU of 6tw4 by Molmil
HumRadA22F in complex with compound 6
Descriptor: CALCIUM ION, DNA repair and recombination protein RadA, ~{N}-[2-[(2~{S})-2-[[(1~{S})-1-(4-methoxyphenyl)ethyl]carbamoyl]pyrrolidin-1-yl]-2-oxidanylidene-ethyl]quinoline-2-carboxamide
Authors:Marsh, M.E, Scott, D.E, Coyne, A.G, Skidmore, J, Abell, C, Hyvonen, M.
Deposit date:2020-01-12
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:A small-molecule inhibitor of the BRCA2-RAD51 interaction modulates RAD51 assembly and potentiates DNA damage-induced cell death.
Cell Chem Biol, 28, 2021
1IFS
DownloadVisualize
BU of 1ifs by Molmil
RICIN A-CHAIN (RECOMBINANT) COMPLEX WITH ADENOSINE (ADENOSINE BECOMES ADENINE IN THE COMPLEX)
Descriptor: ADENINE, RICIN
Authors:Weston, S.A, Tucker, A.D, Thatcher, D.R, Derbyshire, D.J, Pauptit, R.A.
Deposit date:1996-07-05
Release date:1998-01-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of recombinant ricin A-chain at 1.8 A resolution.
J.Mol.Biol., 244, 1994
6TW9
DownloadVisualize
BU of 6tw9 by Molmil
HumRadA22F in complex with CAM833
Descriptor: CALCIUM ION, DNA repair and recombination protein RadA, GLYCEROL, ...
Authors:Fischer, G, Marsh, M.E, Scott, D.E, Coyne, A.G, Skidmore, J, Abell, C, Hyvonen, M.
Deposit date:2020-01-12
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:A small-molecule inhibitor of the BRCA2-RAD51 interaction modulates RAD51 assembly and potentiates DNA damage-induced cell death.
Cell Chem Biol, 28, 2021
6TWK
DownloadVisualize
BU of 6twk by Molmil
Substrate bound structure of the Ectoine utilization protein EutD (DoeA) from Halomonas elongata
Descriptor: (2~{R})-4-azanyl-2-[[(1~{S})-1-oxidanylethyl]amino]butanoic acid, (4S)-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Ectoine hydrolase DoeA
Authors:Mais, C.-N, Altegoer, F, Bange, G.
Deposit date:2020-01-13
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Degradation of the microbial stress protectants and chemical chaperones ectoine and hydroxyectoine by a bacterial hydrolase-deacetylase complex.
J.Biol.Chem., 295, 2020
8HT0
DownloadVisualize
BU of 8ht0 by Molmil
Improved thermostability of a glucose-tolerant glycosidase based on its X-ray crystal structure
Descriptor: Beta-glucosidase
Authors:Dong, P.P, Wu, Y.K.
Deposit date:2022-12-20
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Improved thermostability of a glucose-tolerant glycosidase based on its X-ray crystal structure
To Be Published
5IIU
DownloadVisualize
BU of 5iiu by Molmil
Crystal structure of Equine Serum Albumin in the presence of 10 mM zinc at pH 6.9
Descriptor: SULFATE ION, Serum albumin, ZINC ION
Authors:Handing, K.B, Shabalin, I.G, Cooper, D.R, Cymborowski, M.T, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2016-03-01
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins.
Chem Sci, 7, 2016
8P00
DownloadVisualize
BU of 8p00 by Molmil
Cryo-EM structure of Rotavirus B NSP2
Descriptor: Non-structural protein 2
Authors:Chamera, S, Nowotny, M.
Deposit date:2023-05-09
Release date:2024-02-28
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of rotavirus B NSP2 reveals its unique tertiary architecture.
J.Virol., 98, 2024

223790

数据于2024-08-14公开中

PDB statisticsPDBj update infoContact PDBjnumon