PDB: 224004 resultsInfo pagesStatus searchChemie searchBIRD

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4G6Q	The crystal structure of a functionally unknown protein Kfla_6221 from Kribbella flavida DSM 17836 Descriptor: Putative uncharacterized protein, SULFATE ION Authors: Tan, K, Chhor, G, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2012-07-19 Release date: 2012-09-19 Method: X-RAY DIFFRACTION (2.08 Å) Cite: The crystal structure of a functionally unknown protein Kfla_6221 from Kribbella flavida DSM 17836, CASP Target To be Published
4G75	Structure of PaeM, a colicin M-like bacteriocin produced by Pseudomonas aeruginosa Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, phosphodiesterase Authors: Touze, T, Graille, M, Mengin-Lecreulx, D. Deposit date: 2012-07-20 Release date: 2012-09-12 Last modified: 2012-11-14 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Functional and Structural Characterization of PaeM, a Colicin M-like Bacteriocin Produced by Pseudomonas aeruginosa. J.Biol.Chem., 287, 2012
3CNV	Crystal structure of the ligand-binding domain of a putative GntR-family transcriptional regulator from Bordetella bronchiseptica Descriptor: CHLORIDE ION, CITRATE ANION, Putative GntR-family transcriptional regulator Authors: Zimmerman, M.D, Xu, X, Cui, H, Filippova, E.V, Savchenko, A, Edwards, A.M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG) Deposit date: 2008-03-26 Release date: 2008-04-29 Last modified: 2022-04-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure of the ligand-binding domain of a putative GntR-family transcriptional regulator from Bordetella bronchiseptica. To be Published
3VTG	High choriolytic enzyme 1 (HCE-1), a hatching enzyme zinc-protease from Oryzias latipes (Medaka fish) Descriptor: High choriolytic enzyme 1, ZINC ION Authors: Kudo, N, Yasumasu, S, Iuchi, I, Tanokura, M. Deposit date: 2012-05-30 Release date: 2013-06-05 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (1.34 Å) Cite: Crystal Structure of High choriolytic enzyme 1 (HCE-1), a hatching enzyme from Oryzias latipes (Medaka fish) To be Published
4GEP	SULFITE REDUCTASE HEMOPROTEIN CYANIDE COMPLEX REDUCED WITH CRII EDTA Descriptor: CYANIDE ION, IRON/SULFUR CLUSTER, POTASSIUM ION, ... Authors: Crane, B.R, Getzoff, E.D. Deposit date: 1997-07-10 Release date: 1998-01-14 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2 Å) Cite: Probing the catalytic mechanism of sulfite reductase by X-ray crystallography: structures of the Escherichia coli hemoprotein in complex with substrates, inhibitors, intermediates, and products. Biochemistry, 36, 1997
3D7S	Crystal structure of Wild-Type E. Coli Asparate Transcarbamoylase at pH 8.5 at 2.80 A Resolution Descriptor: Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, ZINC ION Authors: Stieglitz, K.A, Xia, J, Kantrowitz, E.R. Deposit date: 2008-05-21 Release date: 2008-07-29 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: The first high pH structure of Escherichia coli aspartate transcarbamoylase. Proteins, 74, 2008
4G7L	Crystal Structure of rat Heme oxygenase-1 in complex with Heme and O2 Descriptor: FORMIC ACID, Heme oxygenase 1, OXYGEN MOLECULE, ... Authors: Sugishima, M, Moffat, K, Noguchi, M. Deposit date: 2012-07-20 Release date: 2012-10-31 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis. Biochemistry, 51, 2012
3CEP	Structure of a tryptophan synthase quinonoid intermediate Descriptor: 3-hydroxy-2-iminopropanoic acid, CESIUM ION, INDOLINE, ... Authors: Barends, T.R.M, Domratcheva, T, Kulik, V, Blumenstein, L, Dunn, M.F, Schlichting, I. Deposit date: 2008-02-29 Release date: 2008-04-01 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure and mechanistic implications of a tryptophan synthase quinonoid intermediate. Chembiochem, 9, 2008
4G7X	Crystal structure of a complex between the CTXphi pIII N-terminal domain and the Vibrio cholerae TolA C-terminal domain Descriptor: Putative uncharacterized protein, TolA protein Authors: Kolappan, S, Ford, C.G, Craig, L. Deposit date: 2012-07-20 Release date: 2012-08-29 Last modified: 2012-11-07 Method: X-RAY DIFFRACTION (1.44 Å) Cite: Crystal Structures of a CTX{varphi} pIII Domain Unbound and in Complex with a Vibrio cholerae TolA Domain Reveal Novel Interaction Interfaces. J.Biol.Chem., 287, 2012
4GFC	N-terminal coiled-coil dimer of C.elegans SAS-6, crystal form B Descriptor: 1,2-ETHANEDIOL, IMIDAZOLE, Spindle assembly abnormal protein 6, ... Authors: Erat, M.C, Vakonakis, I. Deposit date: 2012-08-03 Release date: 2013-06-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Caenorhabditis elegans centriolar protein SAS-6 forms a spiral that is consistent with imparting a ninefold symmetry. Proc.Natl.Acad.Sci.USA, 110, 2013
8ELG	Crystal Structure of HLA-B*15:01 in complex with spike derived peptide NQKLIANAF from OC43 virus Descriptor: ACETATE ION, Beta-2-microglobulin, NQK-OC43 peptide, ... Authors: Murdolo, L.D, Gras, S. Deposit date: 2022-09-24 Release date: 2023-06-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.65 Å) Cite: A common allele of HLA is associated with asymptomatic SARS-CoV-2 infection. Nature, 620, 2023
3VOQ	Crystal structure of the pleckstrin homology domain of human Sin1, a TORC2 subunit Descriptor: Target of rapamycin complex 2 subunit MAPKAP1 Authors: Pan, D, Matsuura, Y. Deposit date: 2012-01-31 Release date: 2012-04-11 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2 Å) Cite: Structures of the pleckstrin homology domain of Saccharomyces cerevisiae Avo1 and its human orthologue Sin1, an essential subunit of TOR complex 2 Acta Crystallogr.,Sect.F, 68, 2012
3VHX	The crystal structure of Arf6-MKLP1 (Mitotic kinesin-like protein 1) complex Descriptor: ADP-ribosylation factor 6, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Makyio, H, Takei, T, Ohgi, H, Takahashi, S, Takatsu, H, Ueda, T, Kanaho, Y, Xie, Y, Shin, H.W, Kamikubo, H, Kataoka, M, Kawasaki, M, Kato, R, Wakatsuki, S, Nakayama, K. Deposit date: 2011-09-12 Release date: 2012-05-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.81 Å) Cite: Structural basis for Arf6-MKLP1 complex formation on the Flemming body responsible for cytokinesis Embo J., 31, 2012
6OVH	Cryo-EM structure of Bimetallic dodecameric cage design 3 (BMC3) from cytochrome cb562 Descriptor: ACETOHYDROXAMIC ACID, FE (III) ION, HEME C, ... Authors: Golub, E, Subramanian, R.H, Yan, X, Alberstein, R.G, Tezcan, F.A. Deposit date: 2019-05-07 Release date: 2020-01-29 Last modified: 2020-02-19 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Constructing protein polyhedra via orthogonal chemical interactions. Nature, 578, 2020
8EPH	Crystal structure of human coagulation factor IXa (S195A), apo-form, DES-GLA Descriptor: CALCIUM ION, Coagulation factor IXa heavy chain, Coagulation factor IXa light chain, ... Authors: Kolyadko, V.N, Krishnaswamy, S. Deposit date: 2022-10-05 Release date: 2024-07-03 Last modified: 2024-07-24 Method: X-RAY DIFFRACTION (1.88 Å) Cite: An RNA aptamer exploits exosite-dependent allostery to achieve specific inhibition of coagulation factor IXa. Proc.Natl.Acad.Sci.USA, 121, 2024
8EPC	Crystal structure of human coagulation factor IXa (S195A), apo-form Descriptor: CALCIUM ION, Coagulation factor IXa heavy chain, Coagulation factor IXa light chain Authors: Kolyadko, V.N, Krishnaswamy, S. Deposit date: 2022-10-05 Release date: 2024-07-03 Last modified: 2024-07-24 Method: X-RAY DIFFRACTION (2.51 Å) Cite: An RNA aptamer exploits exosite-dependent allostery to achieve specific inhibition of coagulation factor IXa. Proc.Natl.Acad.Sci.USA, 121, 2024
3VKE	Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides Descriptor: DNA (5'-D(P*AP*CP*CP*CP*CP*A)-3'), Poly(rC)-binding protein 1 Authors: Traore, D.A.K, Wilce, M.C.J, Wilce, J.A. Deposit date: 2011-11-15 Release date: 2012-02-29 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides Nucleic Acids Res., 40, 2012
3VNF	Structure of the ebolavirus protein VP24 from Sudan Descriptor: Membrane-associated protein VP24 Authors: Zhang, A.P.P. Deposit date: 2012-01-12 Release date: 2012-04-18 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The ebola virus interferon antagonist VP24 directly binds STAT1 and has a novel, pyramidal fold Plos Pathog., 8, 2012
3VYD	Human renin in complex with inhibitor 6 Descriptor: (3S,5R)-5-{[4-(2-chlorophenyl)-2,2-dimethyl-5-oxopiperazin-1-yl]methyl}-N-(3-methylbutyl)piperidine-3-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Renin Authors: Takahashi, M, Hanzawa, H. Deposit date: 2012-09-24 Release date: 2012-12-19 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.81 Å) Cite: Design and discovery of new (3S,5R)-5-[4-(2-chlorophenyl)-2,2-dimethyl-5-oxopiperazin-1-yl]piperidine-3-carboxamides as potent renin inhibitors Bioorg.Med.Chem.Lett., 22, 2012
3VVO	Crystal structure of MATE in the bent conformation Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative uncharacterized protein Authors: Tanaka, Y, Ishitani, R, Nureki, O. Deposit date: 2012-07-27 Release date: 2013-04-03 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.504 Å) Cite: Structural basis for the drug extrusion mechanism by a MATE multidrug transporter. Nature, 496, 2013
6P18	Q21 transcription antitermination complex: loading complex Descriptor: DNA (67-MER) fragment carrying phage-21 pR' promoter and pause element, nontemplate strand, template strand, ... Authors: Yin, Z, Ebright, R.H. Deposit date: 2019-05-19 Release date: 2019-06-26 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural basis of Q-dependent antitermination. Proc.Natl.Acad.Sci.USA, 116, 2019
3VYC	Crystal structure of unliganded Saccharomyces cerevisiae CRM1 (Xpo1p) Descriptor: Exportin-1 Authors: Saito, N, Matsuura, Y. Deposit date: 2012-09-22 Release date: 2012-11-28 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: A 2.1- angstrom -resolution crystal structure of unliganded CRM1 reveals the mechanism of autoinhibition J.Mol.Biol., 425, 2013
3VVW	NDP52 in complex with LC3C Descriptor: Calcium-binding and coiled-coil domain-containing protein 2, Microtubule-associated proteins 1A/1B light chain 3C Authors: Akutsu, M, Muhlinen, N.V, Randow, F, Komander, D. Deposit date: 2012-07-28 Release date: 2013-02-27 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: LC3C, bound selectively by a noncanonical LIR motif in NDP52, is required for antibacterial autophagy Mol.Cell, 48, 2012
3W3M	Crystal structure of human TLR8 in complex with Resiquimod (R848) crystal form 2 Descriptor: 1-[4-amino-2-(ethoxymethyl)-1H-imidazo[4,5-c]quinolin-1-yl]-2-methylpropan-2-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, ... Authors: Tanji, H, Ohto, U, Shimizu, T. Deposit date: 2012-12-22 Release date: 2013-04-03 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural reorganization of the Toll-like receptor 8 dimer induced by agonistic ligands Science, 339, 2013
3W41	Crystal structure of RsbX in complex with magnesium in space group P21 Descriptor: MAGNESIUM ION, Phosphoserine phosphatase RsbX Authors: Teh, A.H, Makino, M, Baba, S, Shimizu, N, Yamamoto, M, Kumasaka, T. Deposit date: 2013-01-04 Release date: 2014-01-22 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.42 Å) Cite: Structure of the RsbX phosphatase involved in the general stress response of Bacillus subtilis Acta Crystallogr.,Sect.D, 71, 2015

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