Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3FXM
DownloadVisualize
BU of 3fxm by Molmil
Crystal Structure of Human Protein phosphatase 1A (PPM1A) Bound with Citrate at 10 mM of Mn2+
Descriptor: CITRATE ANION, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Hu, T, Wang, L, Wang, K, Jiang, H, Shen, X.
Deposit date:2009-01-21
Release date:2010-01-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the Mn2+-dependent activation of human PPM1A
To be published
3FZX
DownloadVisualize
BU of 3fzx by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE EXPORTED PROTEIN WITH YMCC-LIKE FOLD (BF2203) FROM BACTEROIDES FRAGILIS NCTC 9343 AT 2.22 A RESOLUTION
Descriptor: CALCIUM ION, Putative exported protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-01-26
Release date:2009-02-03
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of putative exported protein with YmcC-like fold (YP_211880.1) from Bacteroides fragilis NCTC 9343 at 2.22 A resolution
To be published
3FXX
DownloadVisualize
BU of 3fxx by Molmil
Human EphA3 Kinase and Juxtamembrane Region Bound to Substrate KQWDNYE[pTyr]IW
Descriptor: Ephrin type-A receptor 3, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Davis, T, Walker, J.R, Mackenzie, F, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2009-01-21
Release date:2009-02-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural recognition of an optimized substrate for the ephrin family of receptor tyrosine kinases.
Febs J., 276, 2009
3FYA
DownloadVisualize
BU of 3fya by Molmil
Crystal Structure of an R35A mutant of the Restriction-Modification Controller Protein C.Esp1396I
Descriptor: Regulatory protein
Authors:Ball, N.J, McGeehan, J.E, Thresh, S.J, Streeter, S.D, Kneale, G.G.
Deposit date:2009-01-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the restriction-modification controller protein C.Esp1396I.
Acta Crystallogr.,Sect.D, 65, 2009
3G0Q
DownloadVisualize
BU of 3g0q by Molmil
Crystal Structure of MutY bound to its inhibitor DNA
Descriptor: 5'-D(*AP*AP*GP*AP*CP*(8OG)P*GP*GP*GP*AP*C)-3', 5'-D(*GP*TP*CP*CP*CP*AP*GP*TP*CP*TP*T)-3', A/G-specific adenine glycosylase, ...
Authors:Lee, S, Verdine, G.L.
Deposit date:2009-01-28
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Atomic substitution reveals the structural basis for substrate adenine recognition and removal by adenine DNA glycosylase.
Proc.Natl.Acad.Sci.Usa, 106, 2009
3FYN
DownloadVisualize
BU of 3fyn by Molmil
Crystal structure from the mobile metagenome of Cole Harbour Salt Marsh: Integron Cassette Protein HFX_CASS3
Descriptor: ACETATE ION, Integron gene cassette protein HFX_CASS3, MAGNESIUM ION
Authors:Sureshan, V, Deshpande, C.N, Harrop, S.J, Kudritska, M, Koenig, J.E, Evdokimova, E, Osipiuk, J, Edwards, A.M, Savchenko, A, Joachimiak, A, Doolittle, W.F, Stokes, H.W, Curmi, P.M.G, Mabbutt, B.C, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-01-22
Release date:2009-02-10
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Structure from the mobile metagenome of Cole Harbour Salt Marsh: Integron Cassette Protein HFX_CASS3
To be Published
3G23
DownloadVisualize
BU of 3g23 by Molmil
Crystal structure of a ld-carboxypeptidase a (saro_1426) from novosphingobium aromaticivorans dsm at 1.89 A resolution
Descriptor: GLYCEROL, LD-carboxypeptidase A, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-01-30
Release date:2009-02-10
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure and function of a novel LD-carboxypeptidase a involved in peptidoglycan recycling.
J.Bacteriol., 195, 2013
3G2Z
DownloadVisualize
BU of 3g2z by Molmil
CTX-M-9 class A beta-lactamase complexed with compound 2 (GZ2)
Descriptor: 3-(1H-tetrazol-5-ylamino)cyclohex-2-en-1-one, Beta-lactamase CTX-M-9a, DIMETHYL SULFOXIDE
Authors:Chen, Y, Shoichet, B.K.
Deposit date:2009-02-01
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular docking and ligand specificity in fragment-based inhibitor discovery
Nat.Chem.Biol., 5, 2009
3GI6
DownloadVisualize
BU of 3gi6 by Molmil
Crystal structure of protease inhibitor, AD78 in complex with wild type HIV-1 protease
Descriptor: (5S)-N-[(1S,2R)-2-Hydroxy-3-[[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino]-1-(phenylmethyl)propyl]-2-oxo-3-[3-(trif luoromethyl)phenyl]-5-oxazolidinecarboxamide, PHOSPHATE ION, Protease
Authors:Nalam, M.N.L, Schiffer, C.A.
Deposit date:2009-03-05
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Evaluating the substrate-envelope hypothesis: structural analysis of novel HIV-1 protease inhibitors designed to be robust against drug resistance.
J.Virol., 84, 2010
3GJ1
DownloadVisualize
BU of 3gj1 by Molmil
Non photoactivated state of PA-GFP
Descriptor: CHLORIDE ION, Green fluorescent protein, SULFATE ION
Authors:Henderson, J.N, Gepshtein, R, Heenan, J.R, Kallio, K, Huppert, D, Remington, S.J.
Deposit date:2009-03-07
Release date:2009-03-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and mechanism of the photoactivatable green fluorescent protein.
J.Am.Chem.Soc., 131, 2009
3FT7
DownloadVisualize
BU of 3ft7 by Molmil
Crystal structure of an extremely stable dimeric protein from sulfolobus islandicus
Descriptor: GLYCEROL, Uncharacterized protein ORF56
Authors:Neumann, P, Loew, C, Weininger, U, Stubbs, M.T.
Deposit date:2009-01-12
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Based Stability Analysis of an Extremely Stable Dimeric DNA Binding Protein from Sulfolobus islandicus
Biochemistry, 48, 2009
3FUR
DownloadVisualize
BU of 3fur by Molmil
Crystal Structure of PPARg in complex with INT131
Descriptor: 2,4-dichloro-N-[3,5-dichloro-4-(quinolin-3-yloxy)phenyl]benzenesulfonamide, CHLORIDE ION, Nuclear receptor coactivator 1, ...
Authors:Wang, Z, Liu, J, Walker, N.
Deposit date:2009-01-14
Release date:2009-06-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:INT131: a selective modulator of PPAR gamma.
J.Mol.Biol., 386, 2009
3FQT
DownloadVisualize
BU of 3fqt by Molmil
Phosphorylation of self-peptides alters Human Leukocyte Antigen Class I-restricted antigen presentation and generates tumor specific epitopes
Descriptor: Beta-2-microglobulin, CADMIUM ION, GLYCEROL, ...
Authors:Petersen, J, Rossjohn, J.
Deposit date:2009-01-07
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Phosphorylated self-peptides alter human leukocyte antigen class I-restricted antigen presentation and generate tumor-specific epitopes
Proc.Natl.Acad.Sci.Usa, 106, 2009
3FRO
DownloadVisualize
BU of 3fro by Molmil
Crystal structure of Pyrococcus abyssi glycogen synthase with open and closed conformations
Descriptor: 1,5-anhydro-D-fructose, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GlgA glycogen synthase, ...
Authors:Diaz, A, Guinovart, J.J, Fita, I, Ferrer, J.C.
Deposit date:2009-01-08
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lyase activity of glycogen synthase: Is an elimination/addition mechanism a possible reaction pathway for retaining glycosyltransferases?
IUBMB Life, 64, 2012
3FVQ
DownloadVisualize
BU of 3fvq by Molmil
Crystal structure of the nucleotide binding domain FbpC complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Fe(3+) ions import ATP-binding protein fbpC
Authors:Newstead, S, Bilton, P, Carpenter, E.P, Campopiano, D, Iwata, S.
Deposit date:2009-01-16
Release date:2009-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into how nucleotide-binding domains power ABC transport.
Structure, 17, 2009
3FSL
DownloadVisualize
BU of 3fsl by Molmil
Crystal structure of tyrosine aminotransferase tripple mutant (P181Q,R183G,A321K) from Escherichia coli at 2.35 A resolution
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, Aromatic-amino-acid aminotransferase
Authors:Malashkevich, V.N, Ng, B, Kirsch, J.F.
Deposit date:2009-01-09
Release date:2009-01-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of tyrosine aminotransferase tripple mutant (P181Q,R183G,A321K) from Escherichia coli at 2.35 A resolution
To be Published
3FX0
DownloadVisualize
BU of 3fx0 by Molmil
Crystal structure of Human NEMO CC2_LZ domain
Descriptor: NF-kappa-B essential modulator
Authors:Lo, Y.C, Lin, S.C, Wu, H.
Deposit date:2009-01-19
Release date:2009-04-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for recognition of diubiquitins by NEMO.
Mol.Cell, 33, 2009
3FWE
DownloadVisualize
BU of 3fwe by Molmil
Crystal Structure of the Apo D138L CAP mutant
Descriptor: Catabolite gene activator, PROLINE
Authors:Sharma, H, Wang, J, Kong, J, Yu, S, Steitz, T.
Deposit date:2009-01-17
Release date:2009-09-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of apo-CAP reveals that large conformational changes are necessary for DNA binding
Proc.Natl.Acad.Sci.USA, 106, 2009
3FYM
DownloadVisualize
BU of 3fym by Molmil
The 1A structure of YmfM, a putative DNA-binding membrane protein from Staphylococcus aureus
Descriptor: Putative uncharacterized protein, ZINC ION
Authors:Xu, L, Sedelnikova, S.E, Baker, P.J, Rice, D.W.
Deposit date:2009-01-22
Release date:2010-02-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1 Å)
Cite:The 1A structure of YmfM, a putative DNA-binding membrane protein from Staphylococcus aureus
To be Published
3FZI
DownloadVisualize
BU of 3fzi by Molmil
1.9 Angstrom structure of the thermophilic exonuclease III homologue Mth0212
Descriptor: Exodeoxyribonuclease, MAGNESIUM ION
Authors:Lakomek, K, Dickmanns, A, Ficner, R.
Deposit date:2009-01-26
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
3G0T
DownloadVisualize
BU of 3g0t by Molmil
Crystal structure of putative aspartate aminotransferase (NP_905498.1) from Porphyromonas gingivalis W83 at 1.75 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-01-28
Release date:2009-02-10
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular characterization of novel pyridoxal-5'-phosphate-dependent enzymes from the human microbiome.
Protein Sci., 23, 2014
3G0K
DownloadVisualize
BU of 3g0k by Molmil
Crystal structure of a protein of unknown function with a cystatin-like fold (saro_2880) from novosphingobium aromaticivorans dsm at 1.30 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-01-28
Release date:2009-02-10
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of protein of unknown function with a cystatin-like fold (YP_498150.1) from Novosphingobium aromaticivorans DSM 12444 at 1.30 A resolution
To be published
3G0Z
DownloadVisualize
BU of 3g0z by Molmil
Structure of S. pombe Pop2p - Zn2+ and Mn2+ bound form
Descriptor: CCR4-Not complex subunit Caf1, MANGANESE (II) ION, ZINC ION
Authors:Andersen, K.R, Jonstrup, A.T, Van, L.B, Brodersen, D.E.
Deposit date:2009-01-29
Release date:2009-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site
Rna, 15, 2009
3G1T
DownloadVisualize
BU of 3g1t by Molmil
CRYSTAL STRUCTURE OF short chain dehydrogenase from Salmonella enterica subsp. enterica serovar Typhi str. CT18
Descriptor: MAGNESIUM ION, short chain dehydrogenase
Authors:Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-01-30
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:CRYSTAL STRUCTURE OF short chain dehydrogenase from Salmonella enterica subsp. enterica serovar Typhi str. CT18
To be Published
3G2M
DownloadVisualize
BU of 3g2m by Molmil
Crystal Structure of the Glycopeptide N-methyltransferase MtfA
Descriptor: PCZA361.24
Authors:Shi, R, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2009-01-31
Release date:2009-05-05
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and function of the glycopeptide N-methyltransferase MtfA, a tool for the biosynthesis of modified glycopeptide antibiotics.
Chem.Biol., 16, 2009

224201

数据于2024-08-28公开中

PDB statisticsPDBj update infoContact PDBjnumon