PDB: 2044 resultsInfo pagesStatus searchChemie searchBIRD

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7ZAH	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA, aIF1A and aIF5B Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R. Deposit date: 2022-03-22 Release date: 2022-08-03 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
7QIZ	Specific features and methylation sites of a plant 80S ribosome Descriptor: 1,4-DIAMINOBUTANE, 18S, 25S rRNA, ... Authors: Cottilli, P, Itoh, Y, Amunts, A. Deposit date: 2021-12-16 Release date: 2022-08-03 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.38 Å) Cite: Cryo-EM structure and rRNA modification sites of a plant ribosome. Plant Commun., 3, 2022
7Y96	Crystal structure of the carboxy-terminal domain of a coronavirus M protein fused with a split GFP Descriptor: Green fluorescent protein,Membrane protein Authors: Wang, X, Sun, Z, Zhou, X. Deposit date: 2022-06-24 Release date: 2022-08-17 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3.415 Å) Cite: Crystal structure of the membrane (M) protein from a bat betacoronavirus. Pnas Nexus, 2, 2023
8AAB	S148F mutant of blue-to-red fluorescent timer mRubyFT Descriptor: mRubyFT S148F mutant of blue-to-red fluorescent timer Authors: Boyko, K.M, Nikolaeva, A.Y, Vlaskina, A.V, Dorovatovskii, P.V, Subach, O.M, Popov, V.O, Subach, F.V. Deposit date: 2022-06-30 Release date: 2022-08-17 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.6 Å) Cite: mRubyFT/S147I, a mutant of blue-to-red fluorescent timer Crystallography Reports, 2022
7AMF	Crystal structure of rsFolder2 in its non-fluorescent off-state Descriptor: GLYCEROL, Green fluorescent protein Authors: Moreno-Chicano, T, El Khatib, M, Colletier, J.-P. Deposit date: 2020-10-08 Release date: 2022-08-24 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement. Chemphyschem, 23, 2022
7AMB	Crystal structure of rsFolder2 in its fluorescent on-state Descriptor: GLYCEROL, Green fluorescent protein Authors: Moreno-Chicano, T, El Khatib, M, Colletier, J.-P. Deposit date: 2020-10-08 Release date: 2022-08-24 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement. Chemphyschem, 23, 2022
8A43	Human RNA polymerase I Descriptor: DNA-directed RNA polymerase I subunit RPA1, DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA2, ... Authors: Daiss, J.L, Pilsl, M, Straub, K, Bleckmann, A, Hoecherl, M, Heiss, F.B, Abascal-Palacios, G, Ramsay, E, Tluckova, K, Mars, J.C, Fuertges, T, Bruckmann, A, Rudack, T, Bernecky, C, Lamour, V, Panov, K, Vannini, A, Moss, T, Engel, C. Deposit date: 2022-06-10 Release date: 2022-08-31 Last modified: 2022-11-02 Method: ELECTRON MICROSCOPY (4.09 Å) Cite: The human RNA polymerase I structure reveals an HMG-like docking domain specific to metazoans. Life Sci Alliance, 5, 2022
7PHR	Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, HLA class I histocompatibility antigen, ... Authors: Susac, L, Thomas, C, Tampe, R. Deposit date: 2021-08-18 Release date: 2022-08-31 Method: ELECTRON MICROSCOPY (3.08 Å) Cite: Structure of a fully assembled tumor-specific T cell receptor ligated by pMHC. Cell, 185, 2022
8DPD	superfolder GFP Tyr74pCNPhe mutant Descriptor: 1,2-ETHANEDIOL, CARBON DIOXIDE, DI(HYDROXYETHYL)ETHER, ... Authors: Phillips-Piro, C.M, Papoutsis, B, Piacentini, J. Deposit date: 2022-07-15 Release date: 2022-08-31 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Superfolder GFP Tyr74pCNPhe mutant To Be Published
7XCP	Cryo-EM structure of Omicron RBD complexed with ACE2 and 304 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of 304 Fab, ... Authors: Zhao, Z, Qi, J, Gao, F.G. Deposit date: 2022-03-24 Release date: 2022-08-31 Method: ELECTRON MICROSCOPY (3.05 Å) Cite: Omicron SARS-CoV-2 mutations stabilize spike up-RBD conformation and lead to a non-RBM-binding monoclonal antibody escape Nat Commun, 13, 2022
7ZJX	Rabbit 80S ribosome programmed with SECIS and SBP2 Descriptor: 18S rRNA, 28S rRNA, 40S Ribosomal protein eS19, ... Authors: Hilal, T, Simonovic, M, Spahn, C.M.T. Deposit date: 2022-04-12 Release date: 2022-09-07 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon. Science, 376, 2022
8D7F	FlvF from Aspergillus flavus in complex with Bis-Tris Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Terpene cyclase flvF Authors: Tararina, M.A, Christianson, D.W. Deposit date: 2022-06-07 Release date: 2022-09-07 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.62 Å) Cite: Structure of the Repurposed Fungal Terpene Cyclase FlvF Implicated in the C-N Bond-Forming Reaction of Flavunoidine Biosynthesis. Biochemistry, 61, 2022
7SAL	Crystal Structure of LaM6 Nanobody bound to mCherry Descriptor: GLYCEROL, LaM6, mCherry Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.93 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7SAI	Crystal Structure of Lag30 Nanobody bound to eGFP Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Green fluorescent protein, ... Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.23 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7SAH	Crystal Structure of LaG16 Nanobody bound to eGFP Descriptor: Green fluorescent protein, LaG16 Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.6 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7SAK	Crystal Structure of LaM4 Nanobody bound to mCherry Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, LaM4, ... Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.15 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7SAJ	Crystal Structure of LaM2 Nanobody bound to mCherry Descriptor: mCherry, nanobody LaM2 Authors: Cong, A.T.Q, Schellenberg, M.J. Deposit date: 2021-09-22 Release date: 2022-09-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.37 Å) Cite: High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices. Protein Sci., 31, 2022
7ZW0	FAP-80S Complex - Rotated state Descriptor: 18S ribosomal RNA (RDN18-1), 25S ribosomal RNA (RDN25-1), 40S ribosomal protein S0-A, ... Authors: Ikeuchi, K, Buschauer, R, Berninghausen, O, Becker, T, Beckmann, R. Deposit date: 2022-05-17 Release date: 2022-10-05 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: Sensing of individual stalled 80S ribosomes by Fap1 for nonfunctional rRNA turnover. Mol.Cell, 82, 2022
7QVP	Human collided disome (di-ribosome) stalled on XBP1 mRNA Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Denk, T.G, Tesina, P, Beckmann, R. Deposit date: 2022-01-22 Release date: 2022-10-12 Last modified: 2022-11-23 Method: ELECTRON MICROSCOPY (3 Å) Cite: A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation. Nat Commun, 13, 2022
7WTM	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-E Descriptor: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ... Authors: Cheng, J, La Venuta, G, Lau, B, Berninghausen, O, Beckmann, R, Hurt, E. Deposit date: 2022-02-05 Release date: 2022-10-19 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: In vitro structural maturation of an early stage pre-40S particle coupled with U3 snoRNA release and central pseudoknot formation. Nucleic Acids Res., 50, 2022
7WTO	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (without Rps2) Descriptor: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ... Authors: Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. Deposit date: 2022-02-05 Release date: 2022-10-19 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7WTN	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (with Rps2) Descriptor: 18S rRNA, 18S rRNA (guanine(1575)-N(7))-methyltransferase, 40S ribosomal protein S1-A, ... Authors: Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. Deposit date: 2022-02-05 Release date: 2022-10-19 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7WU0	Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B3 Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... Authors: Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. Deposit date: 2022-02-05 Release date: 2022-10-19 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7WTV	Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A2 Descriptor: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... Authors: Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. Deposit date: 2022-02-05 Release date: 2022-10-19 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7WTR	Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-3 Descriptor: 18S rRNA, 18S rRNA (guanine(1575)-N(7))-methyltransferase, 40S ribosomal protein S1-A, ... Authors: Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. Deposit date: 2022-02-05 Release date: 2022-10-19 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022

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