Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6L8U
DownloadVisualize
BU of 6l8u by Molmil
Crystal structure of human BCDIN3D in complex with SAH
Descriptor: RNA 5'-monophosphate methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Liu, Y, Martinez, A, Yamashita, S, Tomita, K.
Deposit date:2019-11-07
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.925 Å)
Cite:Crystal structure of human cytoplasmic tRNAHis-specific 5'-monomethylphosphate capping enzyme.
Nucleic Acids Res., 48, 2020
6L98
DownloadVisualize
BU of 6l98 by Molmil
Crystalline cast nephropathy-causing Bence-Jones protein AK: An entire immunoglobulin lambda light chain dimer
Descriptor: Bence-Jones protein lambda light chain AK
Authors:Nakagaki, T, Noguchi, K, Yohda, M, Odaka, M, Wakui, H, Matsumura, H.
Deposit date:2019-11-08
Release date:2020-09-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Multiple Myeloma-Associated Ig Light Chain Crystalline Cast Nephropathy.
Kidney Int Rep, 5, 2020
6L9J
DownloadVisualize
BU of 6l9j by Molmil
Structure of yeast Snf5 and Swi3 subcomplex
Descriptor: GLYCEROL, SWI/SNF chromatin-remodeling complex subunit SNF5, SWI/SNF complex subunit SWI3
Authors:Long, J, Zhou, H.
Deposit date:2019-11-10
Release date:2020-11-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.642 Å)
Cite:Snf5 and Swi3 subcomplex formation is required for SWI/SNF complex function in yeast.
Biochem.Biophys.Res.Commun., 526, 2020
6LAC
DownloadVisualize
BU of 6lac by Molmil
The structural basis of the beta-carbonic anhydrase CafD (C39A mutant) of the filamentous fungus Aspergillus fumigatus
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Jiin, M.S, Kim, S, Kim, N.J, Hong, S, Kim, S, Sung, J.
Deposit date:2019-11-12
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The structural analysis of non-catalytic zinc binding site in the minor beta-carbonic anhydrase CafD
To be published
6L27
DownloadVisualize
BU of 6l27 by Molmil
X-ray crystal structure of the mutant green fluorescent protein
Descriptor: Green fluorescent protein
Authors:Adachi, M, Shimizu, R, Shibazaki, C, Kagotani, Y, Ostermann, A, Schrader, T.E.
Deposit date:2019-10-02
Release date:2020-04-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (0.77 Å)
Cite:Direct Observation of the Protonation States in the Mutant Green Fluorescent Protein.
J Phys Chem Lett, 11, 2020
6L2O
DownloadVisualize
BU of 6l2o by Molmil
Crystal structure of the R.PabI(Y68F-K154A)-dsDNA(GTAC-5bp-GTAC) complex
Descriptor: DNA (5'-D(*CP*A*GP*CP*AP*GP*TP*AP*CP*TP*TP*AP*AP*AP*GP*TP*AP*CP*TP*GP*CP*TP*G)-3'), RE_R_Pab1 domain-containing protein
Authors:Miyazono, K, Wang, D, Ito, T, Tanokura, M.
Deposit date:2019-10-05
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Distortion of double-stranded DNA structure by the binding of the restriction DNA glycosylase R.PabI.
Nucleic Acids Res., 48, 2020
6L38
DownloadVisualize
BU of 6l38 by Molmil
X-ray structure of human PPARalpha ligand binding domain-GW9662-gemfibrozil co-crystals obtained by delipidation and co-crystallization
Descriptor: 2-chloro-5-nitro-N-phenylbenzamide, Peroxisome proliferator-activated receptor alpha
Authors:Kamata, S, Saito, K, Honda, A, Ishikawa, R, Oyama, T, Ishii, I.
Deposit date:2019-10-09
Release date:2020-11-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.761 Å)
Cite:PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates.
Iscience, 23, 2020
2IC9
DownloadVisualize
BU of 2ic9 by Molmil
The Coiled-coil Domain (residues 1-93) Structure of the Sin Nombre Virus Nucleocapsid Protein
Descriptor: Nucleocapsid protein
Authors:Boudko, S.P, Rossmann, M.G.
Deposit date:2006-09-12
Release date:2007-02-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Coiled-coil Domain Structure of the Sin Nombre Virus Nucleocapsid Protein.
J.Mol.Biol., 366, 2007
6LAM
DownloadVisualize
BU of 6lam by Molmil
Crystal structure of rhesus macaque MHC class I molecule Mamu-B*098 complexed with lysophosphatidylethanolamine
Descriptor: (2R)-2,3-dihydroxypropyl hexadecanoate, 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Shima, Y, Morita, D.
Deposit date:2019-11-12
Release date:2020-04-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of lysophospholipid-bound MHC class I molecules.
J.Biol.Chem., 295, 2020
6LB4
DownloadVisualize
BU of 6lb4 by Molmil
Crystal structure of dimeric RXR-LBD complexed with NEt-3ME and TIF2 co-activator
Descriptor: 1,2-ETHANEDIOL, 6-[ethyl-[3-(2-methoxyethoxy)-4-propan-2-yl-phenyl]amino]pyridine-3-carboxylic acid, Nuclear receptor coactivator 2, ...
Authors:Imai, D, Numoto, N, Nakano, S, Kakuta, H, Ito, N.
Deposit date:2019-11-13
Release date:2020-11-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of dimeric RXR-LBD complexed with NEt-3ME and TIF2 co-activator
To Be Published
6L3N
DownloadVisualize
BU of 6l3n by Molmil
Crystal Structure of the acyltransferase domain from the third module of the ansamitocin polyketide synthase
Descriptor: GLYCEROL, METHYLMALONIC ACID, PHOSPHATE ION, ...
Authors:Zhang, F, Zheng, J.
Deposit date:2019-10-11
Release date:2019-12-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural and Biochemical Insight into the Recruitment of Acyl Carrier Protein-Linked Extender Units in Ansamitocin Biosynthesis.
Chembiochem, 21, 2020
6L4H
DownloadVisualize
BU of 6l4h by Molmil
Crystal structure of human NDRG3 C30S mutant
Descriptor: Protein NDRG3
Authors:Kim, K.R, Han, B.W.
Deposit date:2019-10-16
Release date:2020-08-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural and Biophysical Analyses of Human N-Myc Downstream-Regulated Gene 3 (NDRG3) Protein.
Biomolecules, 10, 2020
6L5A
DownloadVisualize
BU of 6l5a by Molmil
The structure of the UdgX mutant H109E at a pre-excision state
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
Authors:Xie, W, Tu, J, Zeng, H.
Deposit date:2019-10-22
Release date:2020-10-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.80007327 Å)
Cite:Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
DNA Repair (Amst), 97, 2021
6L5J
DownloadVisualize
BU of 6l5j by Molmil
Crystal structure of human rootletin 1108-1317
Descriptor: Rootletin
Authors:Kim, J, Choi, H.J.
Deposit date:2019-10-23
Release date:2020-07-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Identification of a Structurally Dynamic Domain for Oligomer Formation in Rootletin.
J.Mol.Biol., 432, 2020
6LBD
DownloadVisualize
BU of 6lbd by Molmil
shrimp ferritin T158R G159R
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin
Authors:Zhao, G, Chen, H.
Deposit date:2019-11-14
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.386 Å)
Cite:Construction of thermally robust and porous shrimp ferritin crystalline for molecular encapsulation through intermolecular arginine-arginine attractions.
Food Chem, 349, 2021
6LBK
DownloadVisualize
BU of 6lbk by Molmil
Structure of rat GLD-2 (Terminal nucleotidyltransferase 2, TENT2)
Descriptor: Poly(A) RNA polymerase GLD2
Authors:Ma, X.Y, Gao, S.
Deposit date:2019-11-14
Release date:2020-07-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4956882 Å)
Cite:Structures of mammalian GLD-2 proteins reveal molecular basis of their functional diversity in mRNA and microRNA processing.
Nucleic Acids Res., 48, 2020
2IDT
DownloadVisualize
BU of 2idt by Molmil
Structure of M98Q mutant of amicyanin, Cu(II)
Descriptor: Amicyanin, COPPER (II) ION
Authors:Carrell, C.J, Ma, J.K, Antholine, W, Hosler, J.P, Mathews, F.S, Davidson, V.L.
Deposit date:2006-09-15
Release date:2007-03-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1 Å)
Cite:Generation of Novel Copper Sites by Mutation of the Axial Ligand of Amicyanin. Atomic Resolution Structures and Spectroscopic Properties
Biochemistry, 46, 2007
6LCL
DownloadVisualize
BU of 6lcl by Molmil
TtGalA, alpha-galactosidase from Thermus thermophilus in complex with stachyose
Descriptor: Alpha-galactosidase, alpha-D-galactopyranose-(1-6)-alpha-D-galactopyranose
Authors:Chen, S.C, Hsu, C.H.
Deposit date:2019-11-19
Release date:2020-09-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of alpha-Galactosidase from Thermus thermophilus : Insight into Hexamer Assembly and Substrate Specificity.
J.Agric.Food Chem., 68, 2020
6LD4
DownloadVisualize
BU of 6ld4 by Molmil
Zika NS5 polymerase domain
Descriptor: 2,4-dimethoxy-5-thiophen-2-yl-benzoic acid, 3-methoxybenzenesulfonamide, RNA-directed RNA polymerase NS5, ...
Authors:El Sahili, A, Lescar, J.
Deposit date:2019-11-20
Release date:2020-08-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Non-nucleoside Inhibitors of Zika Virus RNA-Dependent RNA Polymerase.
J.Virol., 94, 2020
6LDT
DownloadVisualize
BU of 6ldt by Molmil
K245A mutant of L-tyrosine decarboxylase from Methanocaldococcus jannaschii complexed with a post-decarboxylation quinonoid-like intermediate formed with L-tyrosine
Descriptor: GLYCEROL, L-tyrosine/L-aspartate decarboxylase, SULFATE ION, ...
Authors:Manoj, N, Chellam Gayathri, S.
Deposit date:2019-11-23
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural insights into the mechanism of internal aldimine formation and catalytic loop dynamics in an archaeal Group II decarboxylase.
J.Struct.Biol., 208, 2019
6L64
DownloadVisualize
BU of 6l64 by Molmil
X-ray structure of human galectin-10 in complex with D-glucose
Descriptor: Galectin-10, beta-D-glucopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6A
DownloadVisualize
BU of 6l6a by Molmil
X-ray structure of human galectin-10 in complex with D-mannose
Descriptor: Galectin-10, beta-D-mannopyranose
Authors:Kamitori, S.
Deposit date:2019-10-28
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6H
DownloadVisualize
BU of 6l6h by Molmil
Crystal structure of Lpg0189
Descriptor: ACETATE ION, GLYCEROL, Uncharacterized protein Lpg0189
Authors:Ge, H, Chen, X.
Deposit date:2019-10-29
Release date:2019-11-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Crystal structure of a hypothetical T2SS effector Lpg0189 from Legionella pneumophila reveals a novel protein fold.
Biochem.Biophys.Res.Commun., 521, 2020
6LE0
DownloadVisualize
BU of 6le0 by Molmil
A nonspecific heme-binding cyclase catalyzes [4 + 2] cycloaddition during neoabyssomicin biosynthesis
Descriptor: AbmU
Authors:Ju, J.J.
Deposit date:2019-11-23
Release date:2020-11-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Nonspecific Heme-Binding Cyclase, AbmU, Catalyzes [4 + 2] Cycloaddition during Neoabyssomicin Biosynthesis.
Acs Omega, 5, 2020
6LEL
DownloadVisualize
BU of 6lel by Molmil
Structure of E. coli beta-glucuronidase complex with C6-hexyl uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid, Beta-D-glucuronidase
Authors:Lin, H.-Y, Kuo, Y.-H, Lin, C.-H.
Deposit date:2019-11-25
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon