PDB: 92212 resultsInfo pagesStatus searchChemie searchBIRD

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7ULF	l-glutamate/GTP complex of F420-gamma glutamyl ligase (CofE) from Archaeoglobus fulgidus Descriptor: Coenzyme F420:L-glutamate ligase, GAMMA-L-GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Bashiri, G, Squire, C.J. Deposit date: 2022-04-04 Release date: 2023-04-12 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.61 Å) Cite: A Universal Mechanism for Poly-glutamylation To Be Published
4UQ2	Crystal structure of HLA-A1101 in complex with an azobenzene- containing peptide Descriptor: AZOBENZENE-CONTAINING PEPTIDE, BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ... Authors: Thong, S.Y, Yap, J.W, Lim, P.Y, Verhelst, S.H, Lescar, J, Meijers, R, Grotenbreg, G.M. Deposit date: 2014-06-19 Release date: 2014-09-17 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.43 Å) Cite: Bioorthogonal Cleavage and Exchange of Major Histocompatibility Complex Ligands by Employing Azobenzene-Containing Peptides. Angew.Chem.Int.Ed.Engl., 53, 2014
3EJR	Golgi alpha-Mannosidase II in complex with 5-substitued swainsonine analog: (5R)-5-[2'-oxo-2'-(4-tert-butylphenyl)ethyl]-swainsonine Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 1-(4-tert-butylphenyl)-2-[(1S,2R,5R,8R,8aR)-1,2,8-trihydroxyoctahydroindolizin-5-yl]ethanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Kuntz, D.A, Shea, K, Rose, D.R. Deposit date: 2008-09-18 Release date: 2009-10-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.27 Å) Cite: Structural Investigation of the Binding of 5-Substituted Swainsonine Analogues to Golgi alpha-Mannosidase II. Chembiochem, 11, 2010
2HXM	Complex of UNG2 and a small Molecule synthetic Inhibitor Descriptor: 4-[(1E,7E)-8-(2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)-3,6-DIOXA-2,7-DIAZAOCTA-1,7-DIEN-1-YL]BENZOIC ACID, Uracil-DNA glycosylase Authors: Bianchet, M.A, Krosky, D.J, Ghung, S, Seiple, L, Amzel, L.M, Stivers, J.T. Deposit date: 2006-08-03 Release date: 2006-12-05 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Mimicking damaged DNA with a small molecule inhibitor of human UNG2. Nucleic Acids Res., 34, 2006
3MIU	Structure of Banana Lectin-pentamannose complex Descriptor: HEXANE-1,6-DIOL, Lectin, ZINC ION, ... Authors: Sharma, A, Vijayan, M. Deposit date: 2010-04-12 Release date: 2010-09-08 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.63 Å) Cite: Influence of glycosidic linkage on the nature of carbohydrate binding in beta-prism I fold lectins: an X-ray and molecular dynamics investigation on banana lectin-carbohydrate complexes Glycobiology, 21, 2011
2CP4	CRYSTAL STRUCTURE OF THE CYTOCHROME P450-CAM ACTIVE SITE MUTANT THR252ALA Descriptor: CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE Authors: Raag, R, Poulos, T.L. Deposit date: 1991-06-04 Release date: 1993-01-15 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of the cytochrome P-450CAM active site mutant Thr252Ala. Biochemistry, 30, 1991
3MIV	Structure of Banana lectin - Glc-alpha(1,2)-Glc complex Descriptor: Lectin, ZINC ION Authors: Sharma, A, Vijayan, M. Deposit date: 2010-04-12 Release date: 2010-09-08 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Influence of glycosidic linkage on the nature of carbohydrate binding in beta-prism I fold lectins: an X-ray and molecular dynamics investigation on banana lectin-carbohydrate complexes Glycobiology, 21, 2011
5CR7	Human cytosolic 5'-nucleotidase II in complex with N-(9H-Purin-6-yl)-3-(3-pyrrol-1-ylphenyl)benzamide Descriptor: ACETATE ION, Cytosolic purine 5'-nucleotidase, GLYCEROL, ... Authors: Aghajari, N, Preeti, P. Deposit date: 2015-07-22 Release date: 2016-01-13 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Identification of Noncompetitive Inhibitors of Cytosolic 5'-Nucleotidase II Using a Fragment-Based Approach. J.Med.Chem., 58, 2015
1Q0M	Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the state after full x-ray-induced reduction Descriptor: ACETIC ACID, NICKEL (II) ION, SULFATE ION, ... Authors: Wuerges, J, Lee, J.-W, Yim, Y.-I, Yim, H.-S, Kang, S.-O, Djinovic Carugo, K. Deposit date: 2003-07-16 Release date: 2004-05-18 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.68 Å) Cite: Crystal structure of nickel-containing superoxide dismutase reveals another type of active site Proc.Natl.Acad.Sci.USA, 101, 2004
1Q0D	Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the oxidized state Descriptor: NICKEL (III) ION, SULFATE ION, Superoxide dismutase [Ni] Authors: Wuerges, J, Lee, J.-W, Yim, Y.-I, Yim, H.-S, Kang, S.-O, Djinovic Carugo, K. Deposit date: 2003-07-16 Release date: 2004-05-18 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of nickel-containing superoxide dismutase reveals another type of active site Proc.Natl.Acad.Sci.USA, 101, 2004
3WH3	human Mincle, ligand free form Descriptor: C-type lectin domain family 4 member E, CALCIUM ION Authors: Furukawa, A, Kamishikiryo, J, Mori, D, Toyonaga, K, Okabe, Y, Toji, A, Kanda, R, Miyake, Y, Ose, T, Yamasaki, S, Maenaka, K. Deposit date: 2013-08-21 Release date: 2013-10-23 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.32 Å) Cite: Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL Proc.Natl.Acad.Sci.USA, 110, 2013
2XOY	C-terminal cysteine-rich domain of human CHFR bound to P(1),P(2)- Diadenosine-5'-pyrophosphate Descriptor: ADENINE, ADENOSINE MONOPHOSPHATE, E3 UBIQUITIN-PROTEIN LIGASE CHFR, ... Authors: Oberoi, J, Bayliss, R. Deposit date: 2010-08-24 Release date: 2010-09-29 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural Basis of Poly(Adp-Ribose) Recognition by the Multizinc Binding Domain of Checkpoint with Forkhead-Associated and Ring Domains (Chfr). J.Biol.Chem., 285, 2010
7JJG	Crystal structure of the second bromodomain (BD2) of human TAF1 bound to ATR kinase inhibitor AZ20 Descriptor: 1,2-ETHANEDIOL, 4-{4-[(3R)-3-methylmorpholin-4-yl]-6-[1-(methylsulfonyl)cyclopropyl]pyrimidin-2-yl}-1H-indole, GLYCEROL, ... Authors: Karim, M.R, Schonbrunn, E. Deposit date: 2020-07-25 Release date: 2021-07-28 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Discovery of Dual TAF1-ATR Inhibitors and Ligand-Induced Structural Changes of the TAF1 Tandem Bromodomain. J.Med.Chem., 65, 2022
1Q0G	Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the state after full x-ray-induced reduction Descriptor: NICKEL (II) ION, SULFATE ION, Superoxide dismutase [Ni] Authors: Wuerges, J, Lee, J.-W, Yim, Y.-I, Yim, H.-S, Kang, S.-O, Djinovic Carugo, K. Deposit date: 2003-07-16 Release date: 2004-05-18 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of nickel-containing superoxide dismutase reveals another type of active site Proc.Natl.Acad.Sci.USA, 101, 2004
2XP0	C-terminal cysteine-rich domain of human CHFR Descriptor: E3 UBIQUITIN-PROTEIN LIGASE CHFR, ZINC ION Authors: Oberoi, J, Bayliss, R. Deposit date: 2010-08-24 Release date: 2010-09-29 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.978 Å) Cite: Structural Basis of Poly(Adp-Ribose) Recognition by the Multizinc Binding Domain of Checkpoint with Forkhead-Associated and Ring Domains (Chfr). J.Biol.Chem., 285, 2010
8FDJ	Wild-Type Sperm Whale Myoglobin in Complex with Nitrosobenzene Descriptor: Myoglobin, NITROSOBENZENE, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Powell, S.M, Wang, B, Thomas, L.M, Richter-Addo, G.B. Deposit date: 2022-12-03 Release date: 2023-07-12 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin. J.Inorg.Biochem., 246, 2023
8FDN	Human Hemoglobin with N-tertbutylhydroxylamine Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... Authors: Powell, S.M, Richter-Addo, G.B, Thomas, L.M. Deposit date: 2022-12-03 Release date: 2023-07-12 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin. J.Inorg.Biochem., 246, 2023
4F5W	Crystal structure of ligand free human STING CTD Descriptor: CALCIUM ION, Transmembrane protein 173 Authors: Gu, L, Shang, G, Zhu, D, Li, N, Zhang, J, Zhu, C, Lu, D, Liu, C, Yu, Q, Zhao, Y, Xu, S. Deposit date: 2012-05-13 Release date: 2012-06-27 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.201 Å) Cite: Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP Nat.Struct.Mol.Biol., 19, 2012
4PH4	The crystal structure of Human VPS34 in complex with PIK-III Descriptor: 4'-(cyclopropylmethyl)-N~2~-(pyridin-4-yl)-4,5'-bipyrimidine-2,2'-diamine, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3 Authors: Knapp, M.S, Elling, R.A. Deposit date: 2014-05-04 Release date: 2014-10-29 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Selective VPS34 inhibitor blocks autophagy and uncovers a role for NCOA4 in ferritin degradation and iron homeostasis in vivo. Nat.Cell Biol., 16, 2014
6W9A	RNF12 RING domain in complex with Ube2e2 Descriptor: E3 ubiquitin-protein ligase RLIM, GLYCEROL, Ubiquitin-conjugating enzyme E2 E2, ... Authors: Middleton, A.J, Day, C.L. Deposit date: 2020-03-22 Release date: 2020-05-20 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The RING Domain of RING Finger 12 Efficiently Builds Degradative Ubiquitin Chains. J.Mol.Biol., 432, 2020
3LN6	Crystal structure of a bifunctional glutathione synthetase from Streptococcus agalactiae Descriptor: Glutathione biosynthesis bifunctional protein gshAB, SULFATE ION Authors: Stout, J, Vergauwen, B, Savvides, S.N. Deposit date: 2010-02-02 Release date: 2011-04-13 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Structures of two bifunctional gamma-Glutamate-cysteine Ligase/Glutathione synthetases (GshF) reveal a novel hybrid ATP-grasp fold To be Published
3EJQ	Golgi alpha-Mannosidase II in complex with 5-substitued swainsonine analog: (5R)-5-[2'-oxo-2'-(4-methylphenyl)ethyl]-swainsonine Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 1-(4-methylphenyl)-2-[(1S,2R,5R,8R,8aR)-1,2,8-trihydroxyoctahydroindolizin-5-yl]ethanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Kuntz, D.A, Rose, D.R. Deposit date: 2008-09-18 Release date: 2009-10-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Structural Investigation of the Binding of 5-Substituted Swainsonine Analogues to Golgi alpha-Mannosidase II. Chembiochem, 11, 2010
2XU4	CATHEPSIN L WITH A NITRILE INHIBITOR Descriptor: (2S,4R)-4-(2-chlorophenyl)sulfonyl-1-[1-(4-fluorophenyl)cyclopropyl]carbonyl-N-[1-(iminomethyl)cyclopropyl]pyrrolidine-2-carboxamide, CATHEPSIN L1, GLYCEROL Authors: Banner, D.W, Benz, J.M, Haap, W. Deposit date: 2010-10-14 Release date: 2011-01-12 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.12 Å) Cite: Systematic Investigation of Halogen Bonding in Protein-Ligand Interactions. Angew.Chem.Int.Ed.Engl., 50, 2011
2XU5	CATHEPSIN L WITH A NITRILE INHIBITOR Descriptor: (2S,4R)-4-(2-chlorophenyl)sulfonyl-N-[1-(iminomethyl)cyclopropyl]-1-[1-(4-methylphenyl)cyclopropyl]carbonyl-pyrrolidine-2-carboxamide, CATHEPSIN L1, CITRATE ANION, ... Authors: Banner, D.W, Benz, J.M, Haap, W. Deposit date: 2010-10-14 Release date: 2011-01-12 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Systematic Investigation of Halogen Bonding in Protein-Ligand Interactions. Angew.Chem.Int.Ed.Engl., 50, 2011
3MIT	Structure of Banana lectin-alpha-D-mannose complex Descriptor: HEXANE-1,6-DIOL, Lectin, ZINC ION, ... Authors: Sharma, A, Vijayan, M. Deposit date: 2010-04-12 Release date: 2010-09-08 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.32 Å) Cite: Influence of glycosidic linkage on the nature of carbohydrate binding in beta-prism I fold lectins: an X-ray and molecular dynamics investigation on banana lectin-carbohydrate complexes Glycobiology, 21, 2011

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