PDB: 92212 resultsInfo pagesStatus searchChemie searchBIRD

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1UVU	BOVINE THROMBIN--BM12.1700 COMPLEX Descriptor: 3-(7-DIAMINOMETHYL-NAPHTHALEN-2-YL)-PROPIONIC ACID ETHYL ESTER, THROMBIN Authors: Engh, R.A, Huber, R. Deposit date: 1996-10-16 Release date: 1997-11-19 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Enzyme flexibility, solvent and 'weak' interactions characterize thrombin-ligand interactions: implications for drug design. Structure, 4, 1996
4E8N	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of NH4+ and Mg2+ Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMMONIUM ION, Group IIC intron, ... Authors: Marcia, M, Pyle, A.M. Deposit date: 2012-03-20 Release date: 2012-11-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.96 Å) Cite: Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
4E8Q	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Tl+ and Mg2+ Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ... Authors: Marcia, M, Pyle, A.M. Deposit date: 2012-03-20 Release date: 2012-11-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.84 Å) Cite: Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
2JUJ	Solution Structure of the UBA domain from c-Cbl Descriptor: E3 ubiquitin-protein ligase CBL Authors: Zhou, Z.R, Hong, J, Lin, D.H, Hu, H.Y. Deposit date: 2007-08-30 Release date: 2008-07-15 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Differential Ubiquitin Binding of the UBA Domains from Human c-Cbl and Cbl-b: NMR Structural and Biochemical Insights. Protein Sci., 2008
4TT5	Crystal Structure of CYP119 from Sulfolobus acidocaldarius, complexed with 4-(4-bromophenyl)-1H imidazole Descriptor: 4-(4-bromophenyl)-1H-imidazole, Cytochrome P450 119, GLYCEROL, ... Authors: Madrona, Y. Deposit date: 2014-06-19 Release date: 2015-02-18 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.18 Å) Cite: NMR and X-ray Analysis of CYP119 ligand-dependent conformational changes To Be Published
1FKD	FK-506 BINDING PROTEIN: THREE-DIMENSIONAL STRUCTURE OF THE COMPLEX WITH THE ANTAGONIST L-685,818 Descriptor: 18-HYDROXYASCOMYCIN, FK506 BINDING PROTEIN Authors: Becker, J.W, Rotonda, J, Mckeever, B.M. Deposit date: 1992-12-02 Release date: 1994-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.72 Å) Cite: FK-506-binding protein: three-dimensional structure of the complex with the antagonist L-685,818. J.Biol.Chem., 268, 1993
4E8V	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+ Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BARIUM ION, Group IIC intron, ... Authors: Marcia, M, Pyle, A.M. Deposit date: 2012-03-20 Release date: 2012-11-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.995 Å) Cite: Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
4E8R	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+ Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CESIUM ION, Group IIC intron, ... Authors: Marcia, M, Pyle, A.M. Deposit date: 2012-03-20 Release date: 2012-11-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.36 Å) Cite: Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
2A5S	Crystal Structure Of The NR2A Ligand Binding Core In Complex With Glutamate Descriptor: GLUTAMIC ACID, N-methyl-D-aspartate receptor NMDAR2A subunit Authors: Furukawa, H, Singh, S.K, Mancusso, R, Gouaux, E. Deposit date: 2005-06-30 Release date: 2005-11-15 Last modified: 2017-07-26 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Subunit arrangement and function in NMDA receptors Nature, 438, 2005
2E21	Crystal structure of TilS in a complex with AMPPNP from Aquifex aeolicus. Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, tRNA(Ile)-lysidine synthase Authors: Kuratani, M, Yoshikawa, Y, Sekine, S, Ishii, T, Shibata, R, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-11-06 Release date: 2007-11-06 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural basis of the initial binding of tRNA(Ile) lysidine synthetase TilS with ATP and L-lysine To be Published
1VA6	Crystal structure of Gamma-glutamylcysteine synthetase from Escherichia Coli B complexed with Transition-state analogue Descriptor: (2S)-2-AMINO-4-[[(2R)-2-CARBOXYBUTYL](PHOSPHONO)SULFONIMIDOYL]BUTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, Glutamate--cysteine ligase, ... Authors: Hibi, T, Nii, H, Nakatsu, T, Kato, H, Hiratake, J, Oda, J. Deposit date: 2004-02-12 Release date: 2004-10-05 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of gamma-glutamylcysteine synthetase: insights into the mechanism of catalysis by a key enzyme for glutathione homeostasis PROC.NATL.ACAD.SCI.USA, 101, 2004
6IEZ	Crystal structure of CERT START domain in complex with compound B16 Descriptor: 2-({4'-pentyl-3'-[2-(pyridin-2-yl)ethyl][1,1'-biphenyl]-4-yl}sulfonyl)ethan-1-ol, LIPID-TRANSFER PROTEIN CERT Authors: Suzuki, M, Nakao, N, Ueno, M, Sakai, S, Egawa, D, Hanzawa, H, Kawasaki, S, Kumagai, K, Kobayashi, S, Hanada, K. Deposit date: 2018-09-18 Release date: 2019-02-27 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Natural ligand-nonmimetic inhibitors of the lipid-transfer protein CERT Commun Chem, 2019
7XVA	Crystal structure of the Human TR4 Ligand Binding Domain in complex with the JAZF1 corepressor fragment Descriptor: Juxtaposed with another zinc finger protein 1, Nuclear receptor subfamily 2 group C member 2 Authors: Liu, Y, Chen, Z. Deposit date: 2022-05-21 Release date: 2022-12-28 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.856 Å) Cite: Structures of human TR4LBD-JAZF1 and TR4DBD-DNA complexes reveal the molecular basis of transcriptional regulation. Nucleic Acids Res., 51, 2023
2LB0	Structure of the first WW domain of human Smurf1 in complex with a di-phosphorylated human Smad1 derived peptide Descriptor: E3 ubiquitin-protein ligase SMURF1, Mothers against decapentaplegic homolog 1 Authors: Macias, M.J, Aragon, E, Goerner, N, Zaromytidou, A, Xi, Q, Escobedo, A, Massague, J. Deposit date: 2011-03-22 Release date: 2011-07-06 Last modified: 2011-07-13 Method: SOLUTION NMR Cite: A Smad action turnover switch operated by WW domain readers of a phosphoserine code. Genes Dev., 25, 2011
4OCE	Crystal structure of the disulfide oxidoreductase DsbA from Proteus mirabilis Descriptor: MALONATE ION, Thiol:disulfide interchange protein Authors: Kurth, F, Martin, J.L. Deposit date: 2014-01-09 Release date: 2014-05-28 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.768 Å) Cite: Crystal Structure of the Dithiol Oxidase DsbA Enzyme from Proteus Mirabilis Bound Non-covalently to an Active Site Peptide Ligand. J.Biol.Chem., 289, 2014
1IM6	CRYSTAL STRUCTURE OF UNLIGATED HPPK(R82A) FROM E.COLI AT 1.74 ANGSTROM RESOLUTION Descriptor: 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE, CHLORIDE ION Authors: Blaszczyk, J, Ji, X. Deposit date: 2001-05-09 Release date: 2003-04-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Dynamic Roles of Arginine Residues 82 and 92 of Escherichia coli 6-Hydroxymethyl-7,8-dihydropterin Pyrophosphokinase: Crystallographic Studies Biochemistry, 42, 2003
7NQZ	Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with Z1827898537 Descriptor: (3S)-N-benzylpyrrolidin-3-amine, AMP PHOSPHORAMIDATE, CHLORIDE ION, ... Authors: Mohamad, N, O'Donoghue, A, Kantsadi, A.L, Vakonakis, I. Deposit date: 2021-03-02 Release date: 2021-03-10 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.319 Å) Cite: Structures of P. falciparum Hsp70-x nucleotide binding domain with small molecule ligands To Be Published
7NQR	Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with Z287256168 Descriptor: (S)-N-(1-cyclopropylethyl)-6-methylpicolinamide, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, AMP PHOSPHORAMIDATE, ... Authors: Mohamad, N, O'Donoghue, A, Kantsadi, A.L, Vakonakis, I. Deposit date: 2021-03-02 Release date: 2021-03-10 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Structures of P. falciparum Hsp70-x nucleotide binding domain with small molecule ligands To Be Published
7NQU	Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with Z396380540 Descriptor: AMP PHOSPHORAMIDATE, CHLORIDE ION, GLYCEROL, ... Authors: Mohamad, N, O'Donoghue, A, Kantsadi, A.L, Vakonakis, I. Deposit date: 2021-03-02 Release date: 2021-03-10 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Structures of P. falciparum Hsp70-x nucleotide binding domain with small molecule ligands To Be Published
7NQS	Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with Z1203107138 Descriptor: 1-ethyl-N-[(4-fluorophenyl)methyl]-1H-pyrazole-4-carboxamide, AMP PHOSPHORAMIDATE, GLYCEROL, ... Authors: Mohamad, N, O'Donoghue, A, Kantsadi, A.L, Vakonakis, I. Deposit date: 2021-03-02 Release date: 2021-03-17 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.56 Å) Cite: Structures of P. falciparum Hsp70-x nucleotide binding domain with small molecule ligands To Be Published
6JCM	Crystal structure of ligand-free Rv0187. Descriptor: ACETATE ION, Probable O-methyltransferase Authors: Kim, J, Lee, S. Deposit date: 2019-01-29 Release date: 2019-12-11 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.08 Å) Cite: Structural and biochemical characterization of Rv0187, an O-methyltransferase from Mycobacterium tuberculosis. Sci Rep, 9, 2019
7YDP	Cryo-EM structure of CD97/miniGs complex Descriptor: Adhesion G protein-coupled receptor E5 subunit beta, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... Authors: He, Y, Wang, N. Deposit date: 2022-07-04 Release date: 2023-07-12 Last modified: 2023-11-29 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis of CD97 activation and G-protein coupling. Cell Chem Biol, 30, 2023
6AOY	F9 pilus adhesin FmlH lectin domain from E. coli UTI89 co-crystallized with o-nitrophenyl beta-galactoside (ONPG) Descriptor: 2-nitrophenyl beta-D-galactopyranoside, Fml fimbrial adhesin FmlD, SULFATE ION Authors: Kalas, V, Hultgren, S.J. Deposit date: 2017-08-16 Release date: 2018-02-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection. Proc.Natl.Acad.Sci.USA, 115, 2018
5M4J	Crystal Structure of Wild-Type Human Prolidase with GlyPro ligand Descriptor: GLYCEROL, GLYCINE, PROLINE, ... Authors: Wilk, P, Weiss, M.S, Mueller, U, Dobbek, H. Deposit date: 2016-10-18 Release date: 2017-07-12 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Substrate specificity and reaction mechanism of human prolidase. FEBS J., 284, 2017
4L54	Structure of cytochrome P450 OleT, ligand-free Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Terminal olefin-forming fatty acid decarboxylase Authors: Leys, D. Deposit date: 2013-06-10 Release date: 2013-11-27 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structure and Biochemical Properties of the Alkene Producing Cytochrome P450 OleTJE (CYP152L1) from the Jeotgalicoccus sp. 8456 Bacterium. J.Biol.Chem., 289, 2014

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