Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6ZUJ
DownloadVisualize
BU of 6zuj by Molmil
Human serine racemase holoenzyme from 20% DMSO soak (XChem crystallographic fragment screen).
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Koulouris, C.R, Bax, B.D, Roe, S.M, Atack, J.R.
Deposit date:2020-07-23
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase.
Commun Biol, 5, 2022
2WOS
DownloadVisualize
BU of 2wos by Molmil
Structure of human S100A7 in complex with 2,6 ANS
Descriptor: 6-[(1E)-CYCLOHEXA-2,4-DIEN-1-YLIDENEAMINO]NAPHTHALENE-2-SULFONATE, CALCIUM ION, PROTEIN S100-A7, ...
Authors:Leon, R, Murray, J.I, Cragg, G, Farnell, B, Pace, T.C, Bohne, C, Boulanger, M.J, Hof, F.
Deposit date:2009-07-27
Release date:2009-10-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and Characterization of Binding Sites on S100A7, a Participant in Cancer and Inflammation Pathways.
Biochemistry, 48, 2009
8GM4
DownloadVisualize
BU of 8gm4 by Molmil
Functional construct of the Eukaryotic elongation factor 2 kinase bound to an ATP-competitive inhibitor
Descriptor: 7-amino-1-cyclopropyl-3-ethyl-2,4-dioxo-1,2,3,4-tetrahydropyrido[2,3-d]pyrimidine-6-carboxamide, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Piserchio, A, Isiorho, E.A, Dalby, K.N, Ghose, R.
Deposit date:2023-03-24
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structure of the complex between calmodulin and a functional construct of eukaryotic elongation factor 2 kinase bound to an ATP-competitive inhibitor.
J.Biol.Chem., 299, 2023
6ZSP
DownloadVisualize
BU of 6zsp by Molmil
Human serine racemase bound to ATP and malonate.
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Koulouris, C.R, Bax, B.D, Roe, S.M, Atack, J.R.
Deposit date:2020-07-16
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Tyrosine 121 moves revealing a ligandable pocket that couples catalysis to ATP-binding in serine racemase.
Commun Biol, 5, 2022
4EMI
DownloadVisualize
BU of 4emi by Molmil
Toluene dioxygenase reductase in reduced state in complex with NAD+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TodA
Authors:Lin, T.Y, Werther, T, Jeoung, J.H, Dobbek, H.
Deposit date:2012-04-12
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.806 Å)
Cite:Suppression of Electron Transfer to Dioxygen by Charge Transfer and Electron Transfer Complexes in the FAD-dependent Reductase Component of Toluene Dioxygenase.
J.Biol.Chem., 287, 2012
6PNP
DownloadVisualize
BU of 6pnp by Molmil
Crystal structure of the splice insert-free neurexin-1 LNS2 domain in complex with neurexophilin-1
Descriptor: Neurexin-1, Neurexophilin-1
Authors:Wilson, S.C, White, K.I, Zhou, Q, Brunger, A.T.
Deposit date:2019-07-02
Release date:2019-10-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structures of neurexophilin-neurexin complexes reveal a regulatory mechanism of alternative splicing.
Embo J., 38, 2019
8G7M
DownloadVisualize
BU of 8g7m by Molmil
ATP-bound mtHsp60 V72I focus
Descriptor: 60 kDa heat shock protein, mitochondrial, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
8G7L
DownloadVisualize
BU of 8g7l by Molmil
ATP-bound mtHsp60 V72I
Descriptor: 60 kDa heat shock protein, mitochondrial, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
3ZHL
DownloadVisualize
BU of 3zhl by Molmil
The crystal structure of single domain antibody 8-14 scaffold
Descriptor: GLYCEROL, MG8-14 SCAFFOLD ANTIBODY
Authors:Song, H.-N, Woo, E.-J, Lim, H.-K.
Deposit date:2012-12-22
Release date:2014-01-08
Last modified:2014-07-16
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Directed Evolution of Human Heavy Chain Variable Domain (Vh) Using in Vivo Protein Fitness Filter.
Plos One, 9, 2014
8G7O
DownloadVisualize
BU of 8g7o by Molmil
ATP- and mtHsp10-bound mtHsp60 V72I focus
Descriptor: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
8G7N
DownloadVisualize
BU of 8g7n by Molmil
ATP- and mtHsp10-bound mtHsp60 V72I
Descriptor: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
2W95
DownloadVisualize
BU of 2w95 by Molmil
STructure of the Discoidin I from Dictyostelium discoideum in complex with GalNAc at 1.75 angstrom resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, ...
Authors:Saboia Aragao, K, Imberty, A, Varrot, A.
Deposit date:2009-01-21
Release date:2010-03-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Discoidin I from Dictyostelium Discoideum and Interactions with Oligosaccharides: Specificity, Affinity, Crystal Structures and Comparison with Discoidin II.
J.Mol.Biol., 400, 2010
8G7K
DownloadVisualize
BU of 8g7k by Molmil
mtHsp60 V72I apo focus
Descriptor: 60 kDa heat shock protein, mitochondrial
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
8G7J
DownloadVisualize
BU of 8g7j by Molmil
mtHsp60 V72I apo
Descriptor: 60 kDa heat shock protein, mitochondrial
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
1W4X
DownloadVisualize
BU of 1w4x by Molmil
Phenylacetone Monooxygenase, a Baeyer-Villiger Monooxygenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHENYLACETONE MONOOXYGENASE, SULFATE ION
Authors:Malito, E, Alfieri, A, Mattevi, A.
Deposit date:2004-08-03
Release date:2004-09-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Baeyer-Villiger Monooxygenase
Proc.Natl.Acad.Sci.USA, 101, 2004
1M7T
DownloadVisualize
BU of 1m7t by Molmil
Solution Structure and Dynamics of the Human-Escherichia coli Thioredoxin Chimera: Insights into Thermodynamic Stability
Descriptor: Chimera of Human and E. coli thioredoxin
Authors:Dangi, B, Dobrodumov, A.V, Louis, J.M, Gronenborn, A.M.
Deposit date:2002-07-22
Release date:2002-09-25
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Human-Escherichia coli Thioredoxin Chimera: Insights into Thermodynamic Stability
Biochemistry, 41, 2002
1MEH
DownloadVisualize
BU of 1meh by Molmil
Inosine Monophosphate Dehydrogenase (IMPDH) From Tritrichomonas Foetus with IMP and MOA bound
Descriptor: INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE, INOSINIC ACID, MYCOPHENOLIC ACID, ...
Authors:Prosise, G.L, Luecke, H.
Deposit date:2002-08-08
Release date:2003-08-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structures of Tritrichomonas foetus Inosine Monophosphate Dehydrogenase in Complex with Substrate, Cofactor and Analogs: A Structural Basis for the Random-in Ordered-out Kinetic Mechanism
J.Mol.Biol., 326, 2003
1W7E
DownloadVisualize
BU of 1w7e by Molmil
NMR Ensemble OF Fasciclin-Like Protein From Rhodobacter sphaeroides
Descriptor: BETA-IG-H3/FASCICLIN
Authors:Moody, R, Phillips-Jones, M.K, Williamson, M.P.
Deposit date:2004-09-01
Release date:2006-03-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Function of a Bacterial Fasciclin I Domain Protein Elucidates Function of Related Cell Adhesion Proteins Such as Tgfbip and Periostin.
FEBS Open Bio, 3, 2013
2W0K
DownloadVisualize
BU of 2w0k by Molmil
Crystal structure of the recombinant variable domain 6JAL2
Descriptor: V1-22 PROTEIN
Authors:Rudino-Pinera, E, Gonzalezrubio-Garrido, P, Horjales, E.
Deposit date:2008-08-19
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A Single Mutation at the Sheet Switch Region Results in Conformational Changes Favoring Lambda6 Light-Chain Fibrillogenesis.
J.Mol.Biol., 396, 2010
6ON0
DownloadVisualize
BU of 6on0 by Molmil
STRUCTURE OF N15 CRO COMPLEXED WITH CONSENSUS OPERATOR DNA
Descriptor: DNA (5'-D(*TP*TP*TP*AP*TP*AP*GP*CP*TP*AP*GP*CP*TP*AP*TP*AP*A)-3'), Gp39
Authors:Hall, B.M, Roberts, S.A, Cordes, M.H.J.
Deposit date:2019-04-19
Release date:2019-05-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Extreme divergence between one-to-one orthologs: the structure of N15 Cro bound to operator DNA and its relationship to the lambda Cro complex.
Nucleic Acids Res., 47, 2019
1M6E
DownloadVisualize
BU of 1m6e by Molmil
CRYSTAL STRUCTURE OF SALICYLIC ACID CARBOXYL METHYLTRANSFERASE (SAMT)
Descriptor: 2-HYDROXYBENZOIC ACID, LUTETIUM (III) ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Zubieta, C, Ross, J.R, Koscheski, P, Yang, Y, Pichersky, E, Noel, J.P.
Deposit date:2002-07-16
Release date:2003-09-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for Substrate Recognition in The Salicylic Acid Carboxyl Methyltransferase Family
Plant Cell, 15, 2003
1M6S
DownloadVisualize
BU of 1m6s by Molmil
Crystal Structure Of Threonine Aldolase
Descriptor: CALCIUM ION, CHLORIDE ION, L-allo-threonine aldolase
Authors:Burley, S.K, Kielkopf, C.L.
Deposit date:2002-07-17
Release date:2002-12-11
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray Structures of Threonine Aldolase Complexes: Structural Basis of Substrate Recognition
Biochemistry, 41, 2002
6OS4
DownloadVisualize
BU of 6os4 by Molmil
Calmodulin in complex with farnesyl cysteine methyl ester
Descriptor: CALCIUM ION, Calmodulin-1, s-farnesyl-l-cysteine methyl ester
Authors:Grant, B.M.M, Enomoto, M, Lee, K.Y, Back, S.I, Gebregiworgis, T, Ishiyama, N, Ikura, M, Marshall, C.
Deposit date:2019-05-01
Release date:2020-04-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Calmodulin disrupts plasma membrane localization of farnesylated KRAS4b by sequestering its lipid moiety.
Sci.Signal., 13, 2020
1MDY
DownloadVisualize
BU of 1mdy by Molmil
CRYSTAL STRUCTURE OF MYOD BHLH DOMAIN BOUND TO DNA: PERSPECTIVES ON DNA RECOGNITION AND IMPLICATIONS FOR TRANSCRIPTIONAL ACTIVATION
Descriptor: DNA (5'-D(*TP*CP*AP*AP*CP*AP*GP*CP*TP*GP*TP*TP*GP*A)-3'), PROTEIN (MYOD BHLH DOMAIN)
Authors:Ma, P.C.M, Rould, M.A, Weintraub, H, Pabo, C.O.
Deposit date:1994-06-09
Release date:1994-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of MyoD bHLH domain-DNA complex: perspectives on DNA recognition and implications for transcriptional activation.
Cell(Cambridge,Mass.), 77, 1994
3ZQL
DownloadVisualize
BU of 3zql by Molmil
DNA-bound form of TetR-like repressor SimR
Descriptor: 5'-D(*DTP*TP*CP*GP*TP*AP*CP*GP*CP*CP*GP*TP*AP*DCP *GP*AP*A)-3', 5'-D(*DTP*TP*CP*GP*TP*AP*CP*GP*GP*CP*GP*TP*AP*DCP *GP*AP*A)-3', PUTATIVE REPRESSOR SIMREG2
Authors:Le, T.B.K, Schumacher, M.A, Lawson, D.M, Brennan, R.G, Buttner, M.J.
Deposit date:2011-06-10
Release date:2011-08-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The Crystal Structure of the Tetr Family Transcriptional Repressor Simr Bound to DNA and the Role of a Flexible N-Terminal Extension in Minor Groove Binding.
Nucleic Acids Res., 39, 2011

226262

数据于2024-10-16公开中

PDB statisticsPDBj update infoContact PDBjnumon