Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3KWV
DownloadVisualize
BU of 3kwv by Molmil
Structural basis for the unfolding of anthrax lethal factor by protective antigen oligomers
Descriptor: CALCIUM ION, Lethal factor, Protective antigen PA-63
Authors:Feld, G.K, Kintzer, A.F, Krantz, B.A.
Deposit date:2009-12-01
Release date:2010-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Structural basis for the unfolding of anthrax lethal factor by protective antigen oligomers.
Nat.Struct.Mol.Biol., 17, 2010
3HZG
DownloadVisualize
BU of 3hzg by Molmil
Crystal structure of mycobacterium tuberculosis thymidylate synthase X bound with FAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, PHOSPHATE ION, ...
Authors:Staker, B.L, Rathod, P, Hunter, J, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-06-23
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
4ZGA
DownloadVisualize
BU of 4zga by Molmil
Structural basis for inhibition of human autotaxin by four novel compounds
Descriptor: (11aS)-6-(4-fluorobenzyl)-5,6,11,11a-tetrahydro-1H-imidazo[1',5':1,6]pyrido[3,4-b]indole-1,3(2H)-dione, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Stein, A.J, Bain, G, Hutchinson, J.H, Evans, J.F.
Deposit date:2015-04-22
Release date:2015-10-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Inhibition of Human Autotaxin by Four Potent Compounds with Distinct Modes of Binding.
Mol.Pharmacol., 88, 2015
4ZBI
DownloadVisualize
BU of 4zbi by Molmil
Mcl-1 complexed with small molecules
Descriptor: 1-[3-(naphthalen-1-yloxy)propyl]-5,6-dihydro-4H-pyrrolo[3,2,1-ij]quinoline-2-carboxylic acid, Induced myeloid leukemia cell differentiation protein Mcl-1
Authors:Zhao, B.
Deposit date:2015-04-14
Release date:2015-04-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of tricyclic indoles that potently inhibit mcl-1 using fragment-based methods and structure-based design.
J.Med.Chem., 58, 2015
1QJX
DownloadVisualize
BU of 1qjx by Molmil
HUMAN RHINOVIRUS 16 COAT PROTEIN IN COMPLEX WITH ANTIVIRAL COMPOUND WIN68934
Descriptor: 2,6-DIMETHYL-1-(3-[3-METHYL-5-ISOXAZOLYL]-PROPANYL)-4-[4-METHYL-2H-TETRAZOL-2-YL]-PHENOL, MYRISTIC ACID, PROTEIN VP1, ...
Authors:Hadfield, A.T, Diana, G.D, Rossmann, M.G.
Deposit date:1999-07-06
Release date:1999-07-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of Three Structurally Related Antiviral Compounds in Complex with Human Rhinovirus 16
Proc.Natl.Acad.Sci.USA, 96, 1999
3HPF
DownloadVisualize
BU of 3hpf by Molmil
Crystal structure of the mutant Y90F of divergent galactarate dehydratase from Oceanobacillus iheyensis complexed with Mg and galactarate
Descriptor: D-galactaric acid, MAGNESIUM ION, Muconate cycloisomerase
Authors:Fedorov, A.A, Fedorov, E.V, Rakus, J.F, Gerlt, J.A, Almo, S.C.
Deposit date:2009-06-04
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Computation-facilitated assignment of the function in the enolase superfamily: a regiochemically distinct galactarate dehydratase from Oceanobacillus iheyensis .
Biochemistry, 48, 2009
4ZGX
DownloadVisualize
BU of 4zgx by Molmil
Structure of aldosterone synthase (CYP11B2) in complex with (+)-(R)-N-(4-(4-chloro-3-fluorophenyl)-5,6,7,8-tetrahydroisoquinolin-8-yl)propionamide
Descriptor: Cytochrome P450 11B2, mitochondrial, N-[(8R)-4-(4-chloro-3-fluorophenyl)-5,6,7,8-tetrahydroisoquinolin-8-yl]propanamide, ...
Authors:Kuglstatter, A, Joseph, C.
Deposit date:2015-04-24
Release date:2015-10-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Discovery of 4-Aryl-5,6,7,8-tetrahydroisoquinolines as Potent, Selective, and Orally Active Aldosterone Synthase (CYP11B2) Inhibitors: In Vivo Evaluation in Rodents and Cynomolgus Monkeys.
J.Med.Chem., 58, 2015
7YJL
DownloadVisualize
BU of 7yjl by Molmil
Melbournevirus major capsid protein built from 4.4A reconstruction
Descriptor: Major capsid protein
Authors:Burton-Smith, R.N, Okamoto, K, Murata, K.
Deposit date:2022-07-20
Release date:2023-08-02
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (4.42 Å)
Cite:The 4.4A structure of the giant Melbournevirus virion belonging to the Marseilleviridae family
To Be Published
4ZPE
DownloadVisualize
BU of 4zpe by Molmil
BACE1 in complex with 4-(cyclohexylamino)-1-(3-fluorophenyl)-8-(3-isopropoxybenzyl)-1,3,8-triazaspiro[4.5]dec-3-en-2-one
Descriptor: 4-(cyclohexylamino)-1-(3-fluorophenyl)-8-[3-(propan-2-yloxy)benzyl]-1,3,8-triazaspiro[4.5]dec-3-en-2-one, Beta-secretase 1
Authors:Orth, P.
Deposit date:2015-05-07
Release date:2015-08-05
Last modified:2015-10-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Methyl-substitution of an iminohydantoin spiropiperidine beta-secretase (BACE-1) inhibitor has a profound effect on its potency.
Bioorg.Med.Chem.Lett., 25, 2015
3HNC
DownloadVisualize
BU of 3hnc by Molmil
Crystal structure of human ribonucleotide reductase 1 bound to the effector TTP
Descriptor: MAGNESIUM ION, Ribonucleoside-diphosphate reductase large subunit, SULFATE ION, ...
Authors:Fairman, J.W, Wijerathna, S.R, Xu, H, Dealwis, C.G.
Deposit date:2009-05-31
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural basis for allosteric regulation of human ribonucleotide reductase by nucleotide-induced oligomerization.
Nat.Struct.Mol.Biol., 18, 2011
2WY8
DownloadVisualize
BU of 2wy8 by Molmil
Staphylococcus aureus complement subversion protein Sbi-IV in complex with complement fragment C3d
Descriptor: COMPLEMENT C3D FRAGMENT, GLYCEROL, IGG-BINDING PROTEIN
Authors:Clark, E.A, Crennell, S, Upadhyay, A, Mackay, J.D, Bagby, S, van den Elsen, J.M.
Deposit date:2009-11-13
Release date:2010-12-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Structural Basis for Staphylococcal Complement Subversion: X-Ray Structure of the Complement- Binding Domain of Staphylococcus Aureus Protein Sbi in Complex with Ligand C3D.
Mol.Immunol., 48, 2011
3HWI
DownloadVisualize
BU of 3hwi by Molmil
Crystal structure of probable thiosulfate sulfurtransferase Cysa2 (Rhodanese-like protein) from Mycobacterium tuberculosis
Descriptor: Thiosulfate sulfurtransferase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-06-17
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
6A97
DownloadVisualize
BU of 6a97 by Molmil
Crystal structure of MHC-like MILL2
Descriptor: Beta-2-microglobulin, MHC I-like leukocyte 2 long form, SULFATE ION
Authors:Kajikawa, M, Ose, T, Maenaka, K.
Deposit date:2018-07-11
Release date:2018-12-05
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Structure of MHC class I-like MILL2 reveals heparan-sulfate binding and interdomain flexibility.
Nat Commun, 9, 2018
3HWD
DownloadVisualize
BU of 3hwd by Molmil
Crystal structure of Siderocalin (NGAL, Lipocalin 2) K125A-K134A mutant complexed with Ferric Enterobactin
Descriptor: Neutrophil gelatinase-associated lipocalin, SODIUM ION
Authors:Clifton, M.C.
Deposit date:2009-06-17
Release date:2010-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Parsing the functional specificity of Siderocalin / Lipocalin 2 / NGAL for siderophores and related small-molecule ligands
To be Published
2XTE
DownloadVisualize
BU of 2xte by Molmil
Structure of the TBL1 tetramerisation domain
Descriptor: F-BOX-LIKE/WD REPEAT-CONTAINING PROTEIN TBL1X
Authors:Oberoi, J, Fairall, L, Watson, P.J, Greenwood, J.A, Schwabe, J.W.R.
Deposit date:2010-10-06
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural Basis for the Assembly of the Smrt/Ncor Core Transcriptional Repression Machinery.
Nat.Struct.Mol.Biol., 18, 2011
3L88
DownloadVisualize
BU of 3l88 by Molmil
Crystal structure of the human Adenovirus type 21 fiber knob
Descriptor: CHLORIDE ION, Fiber protein, GLYCEROL, ...
Authors:Cupelli, K, Jost, M, Persson, B.D, Stehle, T.
Deposit date:2009-12-30
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of adenovirus type 21 knob in complex with CD46 reveals key differences in receptor contacts among species B adenoviruses.
J.Virol., 84, 2010
4ZG7
DownloadVisualize
BU of 4zg7 by Molmil
Structural basis for inhibition of human autotaxin by four novel compounds
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl tetradecanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-({6-chloro-7-fluoro-2-methyl-1-[2-oxo-2-(spiro[cyclopropane-1,3'-indol]-1'(2'H)-yl)ethyl]-1H-indol-3-yl}sulfanyl)-2-fluorobenzoic acid, ...
Authors:Stein, A.J, Bain, G, Hutchinson, J.H, Evans, J.F.
Deposit date:2015-04-22
Release date:2015-10-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Inhibition of Human Autotaxin by Four Potent Compounds with Distinct Modes of Binding.
Mol.Pharmacol., 88, 2015
7Y6Z
DownloadVisualize
BU of 7y6z by Molmil
RLGSGG-AtPRT6 UBR box (I222)
Descriptor: E3 ubiquitin-protein ligase PRT6, ZINC ION
Authors:Kim, L, Song, H.K.
Deposit date:2022-06-21
Release date:2023-07-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance
To Be Published
5VLI
DownloadVisualize
BU of 5vli by Molmil
Computationally designed inhibitor peptide HB1.6928.2.3 in complex with influenza hemagglutinin (A/PuertoRico/8/1934)
Descriptor: 2,5,8,11-TETRAOXATRIDECANE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bernard, S.M, Wilson, I.A.
Deposit date:2017-04-25
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Massively parallel de novo protein design for targeted therapeutics.
Nature, 550, 2017
2XTC
DownloadVisualize
BU of 2xtc by Molmil
Structure of the TBL1 tetramerisation domain
Descriptor: F-BOX-LIKE/WD REPEAT-CONTAINING PROTEIN TBL1X
Authors:Oberoi, J, Fairall, L, Watson, P.J, Greenwood, J.A, Schwabe, J.W.R.
Deposit date:2010-10-06
Release date:2011-01-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural Basis for the Assembly of the Smrt/Ncor Core Transcriptional Repression Machinery.
Nat.Struct.Mol.Biol., 18, 2011
4ZPF
DownloadVisualize
BU of 4zpf by Molmil
BACE1 in complex with 8-(3-((1-aminopropan-2-yl)oxy)benzyl)-4-(cyclohexylamino)-1-(3-fluorophenyl)-1,3,8-triazaspiro[4.5]dec-3-en-2-one
Descriptor: 8-(3-{[(2S)-1-aminopropan-2-yl]oxy}benzyl)-4-(cyclohexylamino)-1-(3-fluorophenyl)-1,3,8-triazaspiro[4.5]dec-3-en-2-one, Beta-secretase 1
Authors:Orth, P.
Deposit date:2015-05-07
Release date:2015-08-05
Last modified:2015-10-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Methyl-substitution of an iminohydantoin spiropiperidine beta-secretase (BACE-1) inhibitor has a profound effect on its potency.
Bioorg.Med.Chem.Lett., 25, 2015
1PQ8
DownloadVisualize
BU of 1pq8 by Molmil
Trypsin at pH 4 at atomic resolution
Descriptor: CITRIC ACID, GLY-GLY-ARG PEPTIDE, LYSINE, ...
Authors:Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S.
Deposit date:2003-06-18
Release date:2003-11-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1 Å)
Cite:Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS.
J.Biol.Chem., 278, 2003
2Y37
DownloadVisualize
BU of 2y37 by Molmil
The discovery of novel, potent and highly selective inhibitors of inducible nitric oxide synthase (iNOS)
Descriptor: 2-[(1R)-3-amino-1-phenyl-propoxy]-4-chloro-benzonitrile, 5,6,7,8-TETRAHYDROBIOPTERIN, GLYCEROL, ...
Authors:Cheshire, D.R, Andrews, G, Beaton, H.G, Birkinshaw, T.N, Boughton-Smith, N, Connolly, S, Cook, T.R, Cooper, A, Cooper, S.L, Cox, D, Dixon, J, Gensmantel, N, Hamley, P.J, Harrison, R, Hartopp, P, Kack, H, Luker, T, Mete, A, Millichip, I, Nicholls, D.J, Pimm, A.D, St-Gallay, S.A, Wallace, A.V.
Deposit date:2010-12-19
Release date:2011-04-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Discovery of Novel, Potent and Highly Selective Inhibitors of Inducible Nitric Oxide Synthase (Inos).
Bioorg.Med.Chem.Lett., 21, 2011
1PQ5
DownloadVisualize
BU of 1pq5 by Molmil
Trypsin at pH 5, 0.85 A
Descriptor: ARGININE, SULFATE ION, Trypsin
Authors:Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S.
Deposit date:2003-06-18
Release date:2003-11-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS.
J.Biol.Chem., 278, 2003
1Q45
DownloadVisualize
BU of 1q45 by Molmil
12-0xo-phytodienoate reductase isoform 3
Descriptor: 12-oxophytodienoate-10,11-reductase, FLAVIN MONONUCLEOTIDE
Authors:Phillips Jr, G.N, Johnson, K.A, Bingman, C.A, Smith, D.W, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2003-08-01
Release date:2003-11-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of Arabidopsis At2g06050, 12-oxophytodienoate reductase isoform 3
Proteins, 58, 2005

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon