PDB: 93172 resultsInfo pagesStatus searchChemie searchBIRD

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5CLA	Alkylpurine DNA glycosylase AlkD bound to DNA containing an abasic site and a free nucleobase (100% product at 360 hours) Descriptor: 7-methyl-3H-imidazo[4,5-c]pyridin-4-amine, AlkD, DNA (5'-D(*CP*CP*CP*GP*AP*(ORP)P*AP*GP*TP*CP*CP*G)-3'), ... Authors: Mullins, E.A, Eichman, B.F. Deposit date: 2015-07-16 Release date: 2015-10-28 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.541 Å) Cite: The DNA glycosylase AlkD uses a non-base-flipping mechanism to excise bulky lesions. Nature, 527, 2015
3DPS	X-ray structure of the unliganded uridine phosphorylase from salmonella typhimurium in homodimeric form at 1.8A Descriptor: GLYCEROL, Uridine phosphorylase Authors: Mikhailov, A.M, Lashkov, A.A. Deposit date: 2008-07-09 Release date: 2009-07-14 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: X-ray structure of the unliganded uridine phosphorylase from salmonella typhimurium in homodimeric form at 1.8A To be Published
5CN9	Ultrafast dynamics in myoglobin: 0.4 ps time delay Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I. Deposit date: 2015-07-17 Release date: 2015-09-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation. Science, 350, 2015
5CNG	ultrafast dynamics in myoglobin: 150 ps time delay Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I. Deposit date: 2015-07-17 Release date: 2015-09-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation. Science, 350, 2015
5UE4	proMMP-9desFnII complexed to JNJ0966 INHIBITOR Descriptor: CALCIUM ION, Matrix metalloproteinase-9, SULFATE ION, ... Authors: Alexander, R.S, Spurlino, J, Milligan, C. Deposit date: 2016-12-29 Release date: 2017-09-13 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Discovery of a highly selective chemical inhibitor of matrix metalloproteinase-9 (MMP-9) that allosterically inhibits zymogen activation. J. Biol. Chem., 292, 2017
1DPC	CRYSTALLOGRAPHIC AND ENZYMATIC INVESTIGATIONS ON THE ROLE OF SER558, HIS610 AND ASN614 IN THE CATALYTIC MECHANISM OF AZOTOBACTER VINELANDII DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P) Descriptor: DIHYDROLIPOYL-TRANSACETYLASE Authors: Hendle, J, Hol, W.G.J. Deposit date: 1995-02-03 Release date: 1995-04-20 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystallographic and enzymatic investigations on the role of Ser558, His610, and Asn614 in the catalytic mechanism of Azotobacter vinelandii dihydrolipoamide acetyltransferase (E2p). Biochemistry, 34, 1995
5CL5	Alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-methyladenine analog or DNA containing an abasic site and a free nucleobase (51% substrate/49% product at 48 hours) Descriptor: 7-methyl-3H-imidazo[4,5-c]pyridin-4-amine, AlkD, DNA (5'-D(*CP*CP*CP*GP*AP*(DZM)P*AP*GP*TP*CP*CP*G)-3'), ... Authors: Mullins, E.A, Eichman, B.F. Deposit date: 2015-07-16 Release date: 2015-10-28 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.569 Å) Cite: The DNA glycosylase AlkD uses a non-base-flipping mechanism to excise bulky lesions. Nature, 527, 2015
5CL6	Alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-methyladenine analog or DNA containing an abasic site and a free nucleobase (33% substrate/67% product at 72 hours) Descriptor: 7-methyl-3H-imidazo[4,5-c]pyridin-4-amine, AlkD, DNA (5'-D(*CP*CP*CP*GP*AP*(DZM)P*AP*GP*TP*CP*CP*G)-3'), ... Authors: Mullins, E.A, Eichman, B.F. Deposit date: 2015-07-16 Release date: 2015-10-28 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.541 Å) Cite: The DNA glycosylase AlkD uses a non-base-flipping mechanism to excise bulky lesions. Nature, 527, 2015
5CLC	Alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-methyladenine analog (9-mer B) Descriptor: AlkD, DNA (5'-D(*AP*AP*GP*CP*CP*(DZM)P*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*TP*GP*GP*CP*T)-3') Authors: Mullins, E.A, Eichman, B.F. Deposit date: 2015-07-16 Release date: 2015-10-28 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.729 Å) Cite: The DNA glycosylase AlkD uses a non-base-flipping mechanism to excise bulky lesions. Nature, 527, 2015
5CN4	Ultrafast dynamics in myoglobin: -0.1 ps time delay Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I. Deposit date: 2015-07-17 Release date: 2015-09-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation. Science, 350, 2015
5CNC	Ultrafast dynamics in myoglobin: 0.6 ps time delay Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I. Deposit date: 2015-07-17 Release date: 2015-09-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation. Science, 350, 2015
1OC7	D405N mutant of the CELLOBIOHYDROLASE CEL6A FROM HUMICOLA INSOLENS in complex with methyl-tetrathio-alpha-d-cellopentoside at 1.1 angstrom resolution Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CELLOBIOHYDROLASE II, ... Authors: Varrot, A, Frandsen, T.P, Von Ossowski, I, Boyer, V, Driguez, H, Schulein, M, Davies, G.J. Deposit date: 2003-02-06 Release date: 2003-07-10 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.11 Å) Cite: Structural Basis for Ligand Binding and Processivity in Cellobiohydrolase Cel6A from Humicola Insolens Structure, 11, 2003
4KMI	Crystal structure of 4-O-beta-D-mannosyl-D-glucose phosphorylase MGP complexed with PO4 Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-O-beta-D-mannosyl-D-glucose phosphorylase, PHOSPHATE ION Authors: Nakae, S, Ito, S, Higa, M, Senoura, T, Wasaki, J, Hijikata, A, Shionyu, M, Ito, S, Shirai, T. Deposit date: 2013-05-08 Release date: 2013-09-04 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of Novel Enzyme in Mannan Biodegradation Process 4-O-beta-d-Mannosyl-d-Glucose Phosphorylase MGP J.Mol.Biol., 425, 2013
1O65	Crystal structure of an hypothetical protein Descriptor: Hypothetical protein yiiM Authors: Structural GenomiX Deposit date: 2003-10-23 Release date: 2003-11-11 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005
5UZS	Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P200 Descriptor: 1,2-ETHANEDIOL, 3-(2-{[(4-chlorophenyl)carbamoyl]amino}propan-2-yl)-N-hydroxybenzene-1-carboximidamide, DI(HYDROXYETHYL)ETHER, ... Authors: Maltseva, N, Kim, Y, Mulligan, R, Makowska-Grzyska, M, Gu, M, Gollapalli, D.R, Hedstrom, L, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2017-02-27 Release date: 2017-03-22 Last modified: 2020-01-01 Method: X-RAY DIFFRACTION (2.367 Å) Cite: Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P200 To Be Published
2VJO	Formyl-CoA transferase mutant variant Q17A with aspartyl-CoA thioester intermediates and oxalate Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, COENZYME A, ... Authors: Berthold, C.L, Toyota, C.G, Richards, N.G.J, Lindqvist, Y. Deposit date: 2007-12-11 Release date: 2007-12-25 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Reinvestigation of the Catalytic Mechanism of Formyl-Coa Transferase, a Class III Coa-Transferase. J.Biol.Chem., 283, 2008
1WB0	specificity and affinity of natural product cyclopentapeptide inhibitor Argifin against human chitinase Descriptor: ARGIFIN, CHITOTRIOSIDASE 1, GLYCEROL, ... Authors: Rao, F.V, Houston, D.R, Boot, R.G, Aerts, J.M.F.G, Hodkinson, M, Adams, D.J, Shiomi, K, Omura, S, Van Aalten, D.M.F. Deposit date: 2004-10-29 Release date: 2005-01-28 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Specificity and Affinity of Natural Product Cyclopentapeptide Inhibitors Against Aspergillus Fumigatus, Human and Bacterial Chitinases Chem.Biol., 12, 2005
1OC5	D405N mutant of the CELLOBIOHYDROLASE CEL6A FROM HUMICOLA INSOLENS in complex with methyl-cellobiosyl-4-deoxy-4-thio-beta-D-cellobioside Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLOBIOHYDROLASE II, GLYCEROL, ... Authors: Varrot, A, Frandsen, T.P, Von Ossowski, I, Boyer, V, Driguez, H, Schulein, M, Davies, G.J. Deposit date: 2003-02-06 Release date: 2003-07-10 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural Basis for Ligand Binding and Processivity in Cellobiohydrolase Cel6A from Humicola Insolens Structure, 11, 2003
1N0A	Turn stability in beta-hairpin peptides: 3:5 type I G1 bulge turns Descriptor: bhpw_pdg, beta-hairpin peptide Authors: Blandl, T, Cochran, A.G, Skelton, N.J. Deposit date: 2002-10-11 Release date: 2003-10-21 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: Turn stability in beta-hairpin peptides: Investigation of peptides containing 3:5 type I G1 bulge turns PROTEIN SCI., 12, 2003
5USX	Crystal structure of thioredoxin-disulfide reductase from Vibrio vulnificus CMCP6 in complex with NADP and FAD Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... Authors: Chang, C, Grimshaw, S, Maltseva, N, Mulligan, R, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2017-02-14 Release date: 2017-02-22 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.603 Å) Cite: Crystal structure of thioredoxin-disulfide reductase from Vibrio vulnificus CMCP6 in complex with NADP and FAD To Be Published
5UUV	Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with a product IMP and the inhibitor P182 Descriptor: GLYCEROL, INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, ... Authors: Kim, Y, Maltseva, N, Mulligan, R, Makowska-Grzyska, M, Gu, M, Gollapalli, D, Hedstrom, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2017-02-17 Release date: 2017-03-01 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Bacillus anthracis in the complex with a product IMP and the inhibitor P182 To Be Published
5UWX	Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P176 Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, ... Authors: Maltseva, N, Kim, Y, Mulligan, R, Makowska-Grzyska, M, Gu, M, Gollapalli, D.R, Hedstrom, L, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2017-02-21 Release date: 2017-03-01 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P176 To Be Published
5UXE	Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P178 Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FORMIC ACID, INOSINIC ACID, ... Authors: Maltseva, N, Kim, Y, Mulligan, R, Makowska-Grzyska, M, Gu, M, Gollapalli, D.R, Hedstrom, L, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2017-02-22 Release date: 2017-03-08 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P178 To Be Published
1GEA	RECEPTOR-BOUND CONFORMATION OF PACAP21 Descriptor: PITUITARY ADENYLATE CYCLASE ACTIVATING POLYPEPTIDE Authors: Inooka, H, Ohtaki, T, Kitahara, O, Ikegami, T, Endo, S, Kitada, C, Ogi, K, Onda, H, Fujino, M, Shirakawa, M. Deposit date: 2000-10-20 Release date: 2001-04-20 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Conformation of a peptide ligand bound to its G-protein coupled receptor. Nat.Struct.Biol., 8, 2001
4IQC	P3121 crystal form of FKBP12.6 Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1B Authors: Chen, H, Mustafi, S.M, Li, H.M, LeMaster, D.M, Hernandez, G. Deposit date: 2013-01-11 Release date: 2014-01-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.903 Å) Cite: Crystal structure and conformational flexibility of the unligated FK506-binding protein FKBP12.6. Acta Crystallogr.,Sect.D, 70, 2014

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