Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9F7Y
DownloadVisualize
BU of 9f7y by Molmil
SARS-CoV-2 papain-like protease (PLpro) C112S-K191D-Q222D-K229R-Q230R-C271S mutant
Descriptor: CHLORIDE ION, MALONIC ACID, Replicase polyprotein 1ab, ...
Authors:Camara-Artigas, A.
Deposit date:2024-05-05
Release date:2025-05-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:SARS-CoV-2 papain-like protease (PLpro) C112S-K191D-Q222D-K229R-Q230R-C271S mutant
To Be Published
9F7P
DownloadVisualize
BU of 9f7p by Molmil
SARS-CoV-2 papain-like protease (PLpro) C112S mutant
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MALONATE ION, ...
Authors:Camara-Artigas, A.
Deposit date:2024-05-04
Release date:2025-05-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:SARS-CoV-2 papain-like protease (PLpro) C112S mutant
To Be Published
9F7U
DownloadVisualize
BU of 9f7u by Molmil
SARS-CoV-2 papain-like protease (PLpro) C112S-K191D-Q222D-K229R-Q230R-C271S mutant
Descriptor: CHLORIDE ION, GLYCEROL, MALONIC ACID, ...
Authors:Camara-Artigas, A.
Deposit date:2024-05-05
Release date:2025-05-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:SARS-CoV-2 papain-like protease (PLpro) C112S-K191D-Q222D-K229R-Q230R-C271S mutant
To Be Published
9F7R
DownloadVisualize
BU of 9f7r by Molmil
SARS-CoV-2 papain-like protease (PLpro) C112S mutant
Descriptor: GLYCEROL, PHOSPHATE ION, Replicase polyprotein 1ab, ...
Authors:Camara-Artigas, A.
Deposit date:2024-05-04
Release date:2025-05-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:SARS-CoV-2 papain-like protease (PLpro) C112S mutant
To Be Published
9F7S
DownloadVisualize
BU of 9f7s by Molmil
SARS-CoV-2 papain-like protease (PLpro) C112S-K191D-K229R mutant
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MALONATE ION, ...
Authors:Camara-Artigas, A.
Deposit date:2024-05-04
Release date:2025-05-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:SARS-CoV-2 papain-like protease (PLpro) C112S-K191D-K229R mutant
To Be Published
9F7T
DownloadVisualize
BU of 9f7t by Molmil
SARS-CoV-2 papain-like protease (PLpro) C112S-K191D-K229R mutant: dimer
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Replicase polyprotein 1ab, ...
Authors:Camara-Artigas, A.
Deposit date:2024-05-04
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:SARS-CoV-2 papain-like protease (PLpro) C112S-K191D-K229R mutant
To Be Published
9FED
DownloadVisualize
BU of 9fed by Molmil
Single-chain chimeric protein mimicking the interaction between HR1 and HR2 in HIV gp41
Descriptor: Chains: A
Authors:Camara-Artigas, A, Gavira, J.A, Conejero-Lara, F, Polo-Megias, D.
Deposit date:2024-05-18
Release date:2025-05-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Single-chain chimeric protein mimicking the interaction between HR1 and HR2 in HIV gp41
To Be Published
8UAV
DownloadVisualize
BU of 8uav by Molmil
Cryo-EM Structure of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin I subunit B (Stx1B)
Descriptor: Shiga toxin subunit B,6,7-dimethyl-8-ribityllumazine synthase 2
Authors:Cristofalo, A.E, Sharma, A, Cerutti, M.L, Sharma, K, Zylberman, V, Goldbaum, F.A, Borgnia, M.J, Otero, L.H.
Deposit date:2023-09-22
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (2.37 Å)
Cite:Cryo-EM Structure of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin I subunit B (Stx1B)
To Be Published
3U9Q
DownloadVisualize
BU of 3u9q by Molmil
Ligand binding domain of PPARgamma complexed with Decanoic Acid and PGC-1a peptide
Descriptor: DECANOIC ACID, PGC-1a peptide, Peroxisome proliferator-activated receptor gamma
Authors:Malapaka, V.R, Xu, H.E.
Deposit date:2011-10-19
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.522 Å)
Cite:Identification and Mechanism of 10-Carbon Fatty Acid as Modulating Ligand of Peroxisome Proliferator-activated Receptors.
J.Biol.Chem., 287, 2012
8RIN
DownloadVisualize
BU of 8rin by Molmil
Crystal structure of EccC5 DUF domain of Mycobacterium tuberculosis
Descriptor: ESX-5 secretion system protein EccC5
Authors:Ceballos-Zuniga, F, Perez-Dorado, I.
Deposit date:2023-12-19
Release date:2024-11-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:New insights into the domain of unknown function (DUF) of EccC 5 , the pivotal ATPase providing the secretion driving force to the ESX-5 secretion system.
Acta Crystallogr D Struct Biol, 80, 2024
8UAW
DownloadVisualize
BU of 8uaw by Molmil
Cryo-EM Structure of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin II subunit B (Stx2B)
Descriptor: Shiga toxin II subunit B,6,7-dimethyl-8-ribityllumazine synthase 2
Authors:Cristofalo, A.E, Sharma, A, Cerutti, M.L, Sharma, K, Zylberman, V, Goldbaum, F.A, Borgnia, M.J, Otero, L.H.
Deposit date:2023-09-22
Release date:2025-03-26
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Cryo-EM Structure of Brucella Abortus Lumazine Synthase (BLS) Engineered with Shiga Toxin II subunit B (Stx2B)
To Be Published
2DRC
DownloadVisualize
BU of 2drc by Molmil
INVESTIGATION OF THE FUNCTIONAL ROLE OF TRYPTOPHAN-22 IN ESCHERICHIA COLI DIHYDROFOLATE REDUCTASE BY SITE-DIRECTED MUTAGENESIS
Descriptor: CALCIUM ION, CHLORIDE ION, DIHYDROFOLATE REDUCTASE, ...
Authors:Brown, K.A, Kraut, J.
Deposit date:1992-06-10
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Investigation of the functional role of tryptophan-22 in Escherichia coli dihydrofolate reductase by site-directed mutagenesis.
Biochemistry, 30, 1991
8BY1
DownloadVisualize
BU of 8by1 by Molmil
streptavidin with an iridium catalyst for CH activation
Descriptor: SULFATE ION, Streptavidin, tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
Authors:Igareta, N.V, Ward, T.R.
Deposit date:2022-12-11
Release date:2023-12-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.486 Å)
Cite:streptavidin mutant S112I with an iridium catalyst for CH activation
To Be Published
8BY0
DownloadVisualize
BU of 8by0 by Molmil
streptavidin mutant S112I K121R with an iridium catalyst for CH activation
Descriptor: SULFATE ION, Streptavidin, tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
Authors:Igareta, N.V, Ward, T.R.
Deposit date:2022-12-11
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:streptavidin mutant S112I with an iridium catalyst for CH activation
To Be Published
1CQF
DownloadVisualize
BU of 1cqf by Molmil
THE COMPLEX OF THE MUTATED SHIGA TOXIN B SUBUNIT AND GB3 TRISACCHARIDE
Descriptor: SHIGA TOXIN B-CHAIN, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Ling, H, Bast, D, Brunton, J.L, Read, R.J.
Deposit date:1999-08-06
Release date:2000-08-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Complex of the Mutated Shiga Toxin B Subunit and Gb3 Trisaccharide
To be Published
4GXS
DownloadVisualize
BU of 4gxs by Molmil
Ligand binding domain of GluA2 (AMPA/glutamate receptor) bound to (-)-kaitocephalin
Descriptor: (5R)-2-[(1S,2R)-2-amino-2-carboxy-1-hydroxyethyl]-5-{(2S)-2-carboxy-2-[(3,5-dichloro-4-hydroxybenzoyl)amino]ethyl}-L-proline, Glutamate receptor 2, ZINC ION
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2012-09-04
Release date:2012-10-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9634 Å)
Cite:The structure of (-)-kaitocephalin bound to the ligand binding domain of the (S)-alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA)/glutamate receptor, GluA2.
J.Biol.Chem., 287, 2012
6YP6
DownloadVisualize
BU of 6yp6 by Molmil
Structural annotation of the conserved carbohydrate esterase vb_24B_21 from Shiga toxin-encoding bacteriophage phi24B
Descriptor: GLYCEROL, NanS-p
Authors:Mayans, O, Franke, B.
Deposit date:2020-04-15
Release date:2020-09-16
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Structural annotation of the conserved carbohydrate esterase vb_24B_21 from Shiga toxin-encoding bacteriophage Phi 24 B .
J.Struct.Biol., 212, 2020
1JH0
DownloadVisualize
BU of 1jh0 by Molmil
Photosynthetic Reaction Center Mutant With Glu L 205 Replaced to Leu
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
Authors:Camara-Artigas, A, Magee, C.L, Williams, J.C, Allen, J.P.
Deposit date:2001-06-27
Release date:2001-09-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Individual interactions influence the crystalline order for membrane proteins.
Acta Crystallogr.,Sect.D, 57, 2001
4KO9
DownloadVisualize
BU of 4ko9 by Molmil
Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V95I/Y108F)
Descriptor: Azurin, COPPER (II) ION
Authors:Inampudi, K.K, Tobin, P.H, Wilson, C.J.
Deposit date:2013-05-11
Release date:2014-05-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.054 Å)
Cite:Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V95I/Y108F)
To be Published
4KO6
DownloadVisualize
BU of 4ko6 by Molmil
Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/V95K/Y108F)
Descriptor: Azurin, COPPER (II) ION
Authors:Inampudi, K.K, Meng, W, Tobin, P.H, Wilson, C.J.
Deposit date:2013-05-11
Release date:2014-05-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.738 Å)
Cite:Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/V95K/Y108F)
To be Published
4KOC
DownloadVisualize
BU of 4koc by Molmil
Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/V95I/Y108F)
Descriptor: Azurin, COPPER (II) ION
Authors:Inampudi, K.K, Tobin, P.H, Wilson, C.J.
Deposit date:2013-05-11
Release date:2014-05-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.459 Å)
Cite:Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/V95I/Y108F)
To be Published
4KO7
DownloadVisualize
BU of 4ko7 by Molmil
Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/W48F/V95I)
Descriptor: Azurin, COPPER (II) ION
Authors:Inampudi, K.K, Meng, W, Tobin, P.H, Wilson, C.J.
Deposit date:2013-05-11
Release date:2014-05-14
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Investigating the functional significance of the interlocked pair structural determinants in Pseudomonas aeruginosa azurin (V31I/W48F/V95I)
To be Published
7VHC
DownloadVisualize
BU of 7vhc by Molmil
Crystal structure of the STX2a complexed with AR4A peptide
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, Shiga toxin 2 B subunit, inhibitor peptide, ...
Authors:Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
Deposit date:2021-09-22
Release date:2022-07-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
7VHF
DownloadVisualize
BU of 7vhf by Molmil
Crystal structure of the STX2a complexed with RRA peptide
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, GLYCEROL, RRA peptide, ...
Authors:Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
Deposit date:2021-09-22
Release date:2022-07-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022
7VHE
DownloadVisualize
BU of 7vhe by Molmil
Crystal structure of the STX2a complexed with RRRA peptide
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, GLYCEROL, RRRA peptide, ...
Authors:Senda, M, Takahashi, M, Nishikawa, K, Senda, T.
Deposit date:2021-09-22
Release date:2022-07-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Sci Rep, 12, 2022

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon