PDB: 92212 resultsInfo pagesStatus searchChemie searchBIRD

---

2YSE	Solution structure of the second WW domain from the human membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1. MAGI-1 Descriptor: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 Authors: Ohnishi, S, Sato, M, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-03 Release date: 2007-10-09 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the second WW domain from the human membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1. MAGI-1 To be Published
2YT6	Solution structure of the SH3_1 domain of Yamaguchi sarcoma viral (v-yes) oncogene homolog 1 Descriptor: Adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530076O17 product:Yamaguchi sarcoma viral (v-yes) oncogene homolog Authors: Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2008-04-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the SH3_1 domain of Yamaguchi sarcoma viral (v-yes) oncogene homolog 1 To be Published
2YTO	Solution structure of the C2H2 type zinc finger (region 659-691) of human Zinc finger protein 484 Descriptor: ZINC ION, Zinc finger protein 484 Authors: Tochio, N, Tomizawa, T, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2007-10-09 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the C2H2 type zinc finger (region 659-691) of human Zinc finger protein 484 To be Published
2YU0	Solution structures of the PAAD_DAPIN domain of mus musculus interferon-activatable protein 205 Descriptor: Interferon-activable protein 205 Authors: Sato, M, Tochio, N, Koshiba, S, Watanabe, M, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2008-02-19 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structures of the PAAD_DAPIN domain of mus musculus interferon-activatable protein 205 To be Published
2YUH	Solution structure of the C-terminal region in human tubulin folding cofactor C Descriptor: Tubulin-specific chaperone C Authors: Saito, K, Tochio, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-06 Release date: 2008-04-15 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the C-terminal region in human tubulin folding cofactor C To be Published
3ZVQ	Crystal Structure of proteolyzed lysozyme Descriptor: LYSOZYME C Authors: Kishan, K.V, Sharma, A. Deposit date: 2011-07-26 Release date: 2011-10-19 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Salt-assisted religation of proteolyzed Glutathione-S-transferase follows Hofmeister series. Protein Pept.Lett., 17, 2010
2LWY	Solution Structure of Bacterial Intein-Like domain from Clostridium thermocellum Descriptor: BACTERIAL INTEIN-LIKE DOMAIN Authors: Aranko, A.S, Oeemig, J.S, Iwai, H. Deposit date: 2012-08-09 Release date: 2013-05-08 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural basis for protein trans-splicing by a bacterial intein-like domain - protein ligation without nucleophilic side chains. Febs J., 280, 2013
2YQP	Solution structure of the zf-HIT domain in DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 Descriptor: Probable ATP-dependent RNA helicase DDX59, ZINC ION Authors: He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-03-30 Release date: 2007-10-02 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the zf-HIT domain in DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 To be Published
2YS4	Solution structure of the N-terminal PapD-like domain of HYDIN protein from human Descriptor: Hydrocephalus-inducing protein homolog Authors: Li, H, Tomizawa, T, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-03 Release date: 2008-04-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the N-terminal PapD-like domain of HYDIN protein from human To be Published
2YT1	Solution structure of the chimera of the C-terminal tail peptide of APP and the C-terminal PID domain of Fe65L Descriptor: Amyloid beta A4 protein and Amyloid beta A4 precursor protein-binding family B member 2 Authors: Li, H, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2008-04-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode J.Biol.Chem., 283, 2008
2YRU	Solution structure of mouse Steroid receptor RNA activator 1 (SRA1) protein Descriptor: Steroid receptor RNA activator 1 Authors: Nameki, N, Saito, K, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-03 Release date: 2008-04-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of mouse Steroid receptor RNA activator 1 (SRA1) protein To be Published
2YSD	Solution structure of the first WW domain from the human membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1. MAGI-1 Descriptor: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 Authors: Ohnishi, S, Tochio, N, Koshiba, S, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-03 Release date: 2007-10-09 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the first WW domain from the human membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1. MAGI-1 To be Published
2YTG	Solution structure of the C2H2 type zinc finger (region 369-401) of human Zinc finger protein 95 homolog Descriptor: ZINC ION, Zinc finger protein 95 homolog Authors: Tomizawa, T, Tochio, N, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2007-10-09 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the C2H2 type zinc finger (region 369-401) of human Zinc finger protein 95 homolog To be Published
2YTP	Solution structure of the C2H2 type zinc finger (region 687-719) of human Zinc finger protein 484 Descriptor: ZINC ION, Zinc finger protein 484 Authors: Tochio, N, Tomizawa, T, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2007-10-09 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the C2H2 type zinc finger (region 687-719) of human Zinc finger protein 484 To be Published
2YUM	Solution structure of the Myb-like DNA-binding domain of human ZZZ3 protein Descriptor: Zinc finger ZZ-type-containing protein 3 Authors: Abe, H, Tochio, N, Miyamoto, K, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-06 Release date: 2007-10-09 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the Myb-like DNA-binding domain of human ZZZ3 protein To be Published
2YUU	Solution structure of the first Phorbol esters/diacylglycerol binding domain of human Protein kinase C, delta Descriptor: Protein kinase C delta type, ZINC ION Authors: Abe, H, Miyamoto, K, Tochio, N, Saito, K, Sasagawa, A, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-06 Release date: 2008-04-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the first Phorbol esters/diacylglycerol binding domain of human Protein kinase C, delta To be Published
6DH9	Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with MSDC-0602 Descriptor: (5S)-5-({4-[2-(3-methoxyphenyl)-2-oxoethoxy]phenyl}methyl)-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma, nonanoic acid Authors: Shang, J, Kojetin, D.J. Deposit date: 2018-05-18 Release date: 2019-05-22 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal Structure of Human PPARgamma Ligand Binding Domain in Complex with MSDC-0602 To Be Published
4HGX	Crystal structure of xylose isomerase domain containing protein (stm4435) from salmonella typhimurium lt2 with unknown ligand Descriptor: ACETATE ION, Xylose isomerase domain containing protein, ZINC ION Authors: Boyko, K.M, Gorbacheva, M.A, Korzhenevskiy, D.A, Dorovatovsky, P.V, Rakitina, T.V, Lipkin, A.V, Shumilin, I.A, Minor, W, Popov, V.O. Deposit date: 2012-10-09 Release date: 2012-10-24 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of xylose isomerase domain containing protein (stm4435) from salmonella typhimurium lt2 with unknown ligand To be Published
3ZQ3	Crystal Structure of Rat Odorant Binding Protein 3 (OBP3) Descriptor: OBP3 PROTEIN Authors: Portman, K.L, Long, J, Carr, S, Brand, L, Winzor, D.J, Searle, M, Scott, D.J. Deposit date: 2013-03-05 Release date: 2014-03-12 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Enthalpy/Entropy Compensation Effects from Cavity Desolvation Underpin Broad Ligand Binding Selectivity for Rat Odorant Binding Protein 3 Biochemistry, 53, 2014
3KG5	Crystal structure of human Ig-beta homodimer Descriptor: B-cell antigen receptor complex-associated protein beta chain Authors: Radaev, S, Sun, P.D. Deposit date: 2009-10-28 Release date: 2010-08-25 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural and Functional Studies of Igalphabeta and Its Assembly with the B Cell Antigen Receptor. Structure, 18, 2010
6D5A	Crystal structure of L,D-transpeptidase 5 from Mycobacterium tuberculosis in apo form Descriptor: L,D-transpeptidase 5, TETRAETHYLENE GLYCOL Authors: Libreros, G.A, Dias, M.V. Deposit date: 2018-04-19 Release date: 2019-02-27 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.622 Å) Cite: Structural Basis for the Interaction and Processing of beta-Lactam Antibiotics by l,d-Transpeptidase 3 (LdtMt3) from Mycobacterium tuberculosis. ACS Infect Dis, 5, 2019
4JK7	Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Mg ion Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... Authors: Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K, MacMillan, A.M. Deposit date: 2013-03-09 Release date: 2013-05-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.4 Å) Cite: A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation. Nat.Struct.Mol.Biol., 20, 2013
4JKD	Open and closed forms of I1790Y human PRP8 RNase H-like domain with bound Mg ion Descriptor: CHLORIDE ION, MAGNESIUM ION, Pre-mRNA-processing-splicing factor 8 Authors: Schellenberg, M.J, Wu, T, Ritchie, D.B, Atta, K.A, MacMillan, A.M. Deposit date: 2013-03-09 Release date: 2013-05-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.55 Å) Cite: A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation. Nat.Struct.Mol.Biol., 20, 2013
7XJW	Crystal structure of canine coronavirus main protease in complex with GC376 Descriptor: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, ORF1a polyprotein Authors: Wang, Y.C, Yang, C.S, Hou, M.H, Tsai, C.L, Chiu, Y.F, Chen, Y. Deposit date: 2022-04-18 Release date: 2023-05-31 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.75 Å) Cite: A Structural Comparison of SARS-CoV-2 Main Protease and Animal Coronaviral Main Protease Reveals Species-Specific Ligand Binding and Dimerization Mechanism. Int J Mol Sci, 23, 2022
3K6L	The structure of E.coli peptide deformylase (PDF) in complex with peptidomimetic ligand BB2827 Descriptor: (2S,3R)-N~4~-[(1S)-1-(dimethylcarbamoyl)-2,2-dimethylpropyl]-N~1~,2-dihydroxy-3-(2-methylpropyl)butanediamide, NICKEL (II) ION, Peptide deformylase Authors: Cheng, R.K.Y, Crawley, L, Wood, M, Barker, J, Felicetti, B, Whittaker, M. Deposit date: 2009-10-09 Release date: 2009-11-10 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.15 Å) Cite: The structure of E.coli peptide deformylase (PDF) in complex with peptidomimetic ligand BB2827 To be Published

<429430431432433434435436437438439440441442443444>