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3CMQ
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BU of 3cmq by Molmil
Crystal structure of human mitochondrial phenylalanine tRNA synthetase
Descriptor: ADENOSINE-5'-[PHENYLALANINYL-PHOSPHATE], MAGNESIUM ION, Phenylalanyl-tRNA synthetase, ...
Authors:Klipcan, L, Levin, I.L, Kessler, N, Moor, N, Finarov, I, Safro, M.
Deposit date:2008-03-24
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The tRNA-Induced Conformational Activation of Human Mitochondrial Phenylalanyl-tRNA Synthetase.
Structure, 16, 2008
1F6U
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BU of 1f6u by Molmil
NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop sl2 of the psi-RNA packaging signal. Implications for genome recognition
Descriptor: HIV-1 NUCLEOCAPSID PROTEIN, HIV-1 STEM-LOOP SL2 FROM PSI-RNA PACKAGING, ZINC ION
Authors:Amarasinghe, G.K, De Guzman, R.N, Turner, R.B, Chancellor, K.J, Summers, M.F.
Deposit date:2000-06-23
Release date:2000-10-09
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition.
J.Mol.Biol., 301, 2000
1D96
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BU of 1d96 by Molmil
MOLECULAR STRUCTURE OF R(GCG)D(TATACGC): A DNA-RNA HYBRID HELIX JOINED TO DOUBLE HELICAL DNA
Descriptor: DNA/RNA (5'-R(*GP*CP*GP*)-D(*TP*AP*TP*AP*CP*GP*C)-3')
Authors:Wang, A.H.-J, Fujii, S, Van Boom, J.H, Van Der Marel, G.A, Van Boeckel, S.A.A, Rich, A.
Deposit date:1992-10-17
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular structure of r(GCG)d(TATACGC): a DNA--RNA hybrid helix joined to double helical DNA.
Nature, 299, 1982
1DQF
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BU of 1dqf by Molmil
CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS
Descriptor: CALCIUM ION, RNA (5'-R(*CP*AP*GP*GP*GP*UP*CP*GP*GP*C)-3'), RNA (5'-R(*GP*CP*CP*AP*CP*CP*CP*UP*G)-3')
Authors:Xiong, Y, Sundaralingam, M.
Deposit date:2000-01-04
Release date:2000-11-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Two crystal forms of helix II of Xenopus laevis 5S rRNA with a cytosine bulge.
RNA, 6, 2000
2AU4
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BU of 2au4 by Molmil
Class I GTP aptamer
Descriptor: Class I RNA aptamer to GTP, GUANOSINE-5'-TRIPHOSPHATE
Authors:Carothers, J.M, Davis, J.H, Chou, J.J, Szostak, J.W.
Deposit date:2005-08-26
Release date:2006-03-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of an informationally complex high-affinity RNA aptamer to GTP.
Rna, 12, 2006
3PF4
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BU of 3pf4 by Molmil
Crystal structure of Bs-CspB in complex with r(GUCUUUA)
Descriptor: Cold shock protein cspB, MAGNESIUM ION, SODIUM ION, ...
Authors:Sachs, R, Max, K.E.A, Heinemann, U.
Deposit date:2010-10-27
Release date:2011-09-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:RNA single strands bind to a conserved surface of the major cold shock protein in crystals and solution.
Rna, 18, 2012
3PF5
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BU of 3pf5 by Molmil
Crystal structure of Bs-CspB in complex with rU6
Descriptor: Cold shock protein cspB, MAGNESIUM ION, hexaribouracil (rU6)
Authors:Sachs, R, Max, K.E.A, Heinemann, U.
Deposit date:2010-10-27
Release date:2011-09-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:RNA single strands bind to a conserved surface of the major cold shock protein in crystals and solution.
Rna, 18, 2012
2O32
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BU of 2o32 by Molmil
Solution structure of U2 snRNA stem I from human, containing modified nucleotides
Descriptor: 5'-R(*(PSU)P*CP*UP*CP*(OMG)P*(OMG)P*CP*CP*(PSU)P*UP*UP*UP*(OMG)P*GP*CP*UP*AP*AP*(OMG)P*A)-3'
Authors:Sashital, D.G, Venditti, V, Angers, C.G, Cornilescu, G, Butcher, S.E.
Deposit date:2006-11-30
Release date:2007-02-06
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and thermodynamics of a conserved U2 snRNA domain from yeast and human.
Rna, 13, 2007
2R20
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BU of 2r20 by Molmil
Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.3 A (Br2)
Descriptor: MAGNESIUM ION, RNA (5'-R(*GP*CP*GP*UP*UP*(5BU)P*GP*AP*AP*AP*CP*GP*C)-3'), SODIUM ION
Authors:Timsit, Y, Bombard, S.
Deposit date:2007-08-24
Release date:2007-09-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The 1.3 A resolution structure of the RNA tridecamer r(GCGUUUGAAACGC): Metal ion binding correlates with base unstacking and groove contraction.
Rna, 13, 2007
2R1S
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BU of 2r1s by Molmil
Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.4 A (Br1)
Descriptor: MAGNESIUM ION, RNA (5'-R(*GP*CP*GP*UP*UP*(5BU)P*GP*AP*AP*AP*CP*GP*C)-3'), SODIUM ION
Authors:Timsit, Y, Bombard, S.
Deposit date:2007-08-23
Release date:2007-09-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The 1.3 A resolution structure of the RNA tridecamer r(GCGUUUGAAACGC): Metal ion binding correlates with base unstacking and groove contraction.
Rna, 13, 2007
3I31
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BU of 3i31 by Molmil
Hera helicase RNA binding domain is an RRM fold
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Heat resistant RNA dependent ATPase, SODIUM ION, ...
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2009-06-30
Release date:2009-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Thermus thermophilus DEAD box helicase Hera contains a modified RNA recognition motif domain loosely connected to the helicase core.
Rna, 15, 2009
3I32
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BU of 3i32 by Molmil
Dimeric structure of a Hera helicase fragment including the C-terminal RecA domain, the dimerization domain, and the RNA binding domain
Descriptor: BROMIDE ION, Heat resistant RNA dependent ATPase
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2009-06-30
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Thermus thermophilus DEAD box helicase Hera contains a modified RNA recognition motif domain loosely connected to the helicase core.
Rna, 15, 2009
4HOU
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BU of 4hou by Molmil
Crystal Structure of N-terminal Human IFIT1
Descriptor: Interferon-induced protein with tetratricopeptide repeats 1
Authors:Abbas, Y.M, Pichlmair, A, Gorna, M.W, Superti-Furga, G, Nagar, B.
Deposit date:2012-10-22
Release date:2013-01-30
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for viral 5'-PPP-RNA recognition by human IFIT proteins.
Nature, 494, 2013
1DK1
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BU of 1dk1 by Molmil
DETAILED VIEW OF A KEY ELEMENT OF THE RIBOSOME ASSEMBLY: CRYSTAL STRUCTURE OF THE S15-RRNA COMPLEX
Descriptor: 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Nikulin, A, Serganov, A, Ennifar, E, Tischenko, S, Nevskaya, N.
Deposit date:1999-12-06
Release date:2000-04-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the S15-rRNA complex.
Nat.Struct.Biol., 7, 2000
3DSQ
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BU of 3dsq by Molmil
Structure of Desulfitobacterium hafniense PylSc, a pyrrolysyl tRNA synthetase
Descriptor: CHLORIDE ION, Pyrrolysyl-tRNA synthetase, SODIUM ION
Authors:Lee, M.M, Chan, M.K.
Deposit date:2008-07-14
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Desulfitobacterium hafniense PylSc, a pyrrolysyl-tRNA synthetase.
Biochem.Biophys.Res.Commun., 374, 2008
1Q75
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BU of 1q75 by Molmil
Solution structure of the dyskeratosis congenita mutant P2b hairpin from human telomerase RNA
Descriptor: DKC mutant P2b telomerase RNA
Authors:Theimer, C.A, Finger, L.D, Feigon, J.
Deposit date:2003-08-15
Release date:2003-12-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:YNMG tetraloop formation by a dyskeratosis congenita mutation in human telomerase RNA.
Rna, 9, 2003
1RRR
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BU of 1rrr by Molmil
RNA DUPLEX CONTAINING A PURINE-RICH STRAND, NMR, 10 STRUCTURES
Descriptor: RNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*AP*GP*C)-3'), RNA (5'-R(*GP*CP*UP*UP*CP*UP*CP*UP*UP*C)-3')
Authors:Gyi, J.I, Lane, A.N, Conn, G.L, Brown, T.
Deposit date:1997-10-21
Release date:1998-04-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of DNA.RNA hybrids with purine-rich and pyrimidine-rich strands: comparison with the homologous DNA and RNA duplexes.
Biochemistry, 37, 1998
1SY4
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BU of 1sy4 by Molmil
Refined solution structure of the S. cerevisiae U6 INTRAMOLECULAR STEM LOOP (ISL) RNA USING RESIDUAL DIPOLAR COUPLINGS (RDCS)
Descriptor: U6 Intramolecular Stem-Loop RNA
Authors:Reiter, N.J, Nikstad, L.J, Allman, A.M, Johnson, R.J, Butcher, S.E.
Deposit date:2004-03-31
Release date:2004-04-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the U6 RNA intramolecular stem-loop harboring an S(P)-phosphorothioate modification.
RNA, 9, 2003
2LT3
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BU of 2lt3 by Molmil
Solution NMR structure of the C-terminal domain of CdnL from Myxococcus xanthus
Descriptor: Transcriptional regulator, CarD family
Authors:Mirassou, Y, Garcia-Moreno, D, Padmanabhan, S, Jimenez, M.A.
Deposit date:2012-05-14
Release date:2013-11-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL.
Plos One, 9, 2014
2LT4
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BU of 2lt4 by Molmil
CdnLNt from Myxoccoccus xanthus
Descriptor: Transcriptional regulator, CarD family
Authors:Jimenez, M.A, Padmanabhan, S, Mirassou, Y.
Deposit date:2012-05-14
Release date:2013-11-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL.
Plos One, 9, 2014
2LWJ
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BU of 2lwj by Molmil
NMR solution structure Myxoccoccus xanthus CdnL
Descriptor: Transcriptional regulator, CarD family
Authors:Jimenez, M, Padmanabhan, S, Mirassou, Y.
Deposit date:2012-08-01
Release date:2014-02-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL.
Plos One, 9, 2014
2LT1
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BU of 2lt1 by Molmil
Solution NMR structure of the 72-residue N-terminal domain of Myxococcus xanthus CarD
Descriptor: CarD protein
Authors:Jimenez, M.A, Padmanabhan, S.
Deposit date:2012-05-10
Release date:2013-11-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure-Function Dissection of Myxococcus xanthus CarD N-Terminal Domain, a Defining Member of the CarD_CdnL_TRCF Family of RNA Polymerase Interacting Proteins.
Plos One, 10
2D3K
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BU of 2d3k by Molmil
Structural study on Project ID PH1539 from Pyrococcus horikoshii OT3
Descriptor: Peptidyl-tRNA hydrolase, ZINC ION
Authors:Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-09-29
Release date:2006-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of peptidyl-tRNA hydrolase 2 from Pyrococcus horikoshii OT3: insight into the functional role of its dimeric state.
Acta Crystallogr.,Sect.D, 64, 2008
2Q7G
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BU of 2q7g by Molmil
Pyrrolysine tRNA Synthetase bound to a pyrrolysine analogue (cyc) and ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Kavran, J.M, Steitz, T.A.
Deposit date:2007-06-06
Release date:2007-07-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation.
Proc.Natl.Acad.Sci.Usa, 104, 2007
1G51
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BU of 1g51 by Molmil
ASPARTYL TRNA SYNTHETASE FROM THERMUS THERMOPHILUS AT 2.4 A RESOLUTION
Descriptor: ADENOSINE MONOPHOSPHATE, ASPARTYL-ADENOSINE-5'-MONOPHOSPHATE, ASPARTYL-TRNA SYNTHETASE, ...
Authors:Poterzsman, A, Delarue, M, Thierry, J.C, Moras, D.
Deposit date:2000-10-30
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Synthesis and recognition of aspartyl-adenylate by Thermus thermophilus aspartyl-tRNA synthetase.
J.Mol.Biol., 244, 1994

238582

数据于2025-07-09公开中

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