Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1WN5
DownloadVisualize
BU of 1wn5 by Molmil
Crystal Structure of Blasticidin S Deaminase (BSD) Complexed with Cacodylic Acid
Descriptor: Blasticidin-S deaminase, CACODYLATE ION, ZINC ION
Authors:Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T.
Deposit date:2004-07-27
Release date:2005-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc
J.Biol.Chem., 282, 2007
1CRH
DownloadVisualize
BU of 1crh by Molmil
THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Berghuis, A.M, Brayer, G.D.
Deposit date:1993-08-06
Release date:1994-01-31
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c.
J.Mol.Biol., 236, 1994
8TVZ
DownloadVisualize
BU of 8tvz by Molmil
RNA origami 3-helix tile Traptamer
Descriptor: RNA (363-MER)
Authors:McRae, E.K.S, Vallina, N.S, Andersen, E.S.
Deposit date:2023-08-18
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (5.94 Å)
Cite:An RNA origami robot that traps and releases a fluorescent aptamer.
Sci Adv, 10, 2024
2QDG
DownloadVisualize
BU of 2qdg by Molmil
Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from Leishmania mexicana
Descriptor: 1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM), Fructose-1,6-bisphosphate aldolase, PHOSPHATE ION
Authors:Lafrance-Vanasse, J, Sygusch, J.
Deposit date:2007-06-20
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Carboxy-Terminus Recruitment Induced by Substrate Binding in Eukaryotic Fructose Bis-phosphate Aldolases
Biochemistry, 46, 2007
8TH7
DownloadVisualize
BU of 8th7 by Molmil
Crystal Structure of the G3BP1 NTF2-like domain bound to the Caprin1 peptide
Descriptor: Caprin-1, Ras GTPase-activating protein-binding protein 1
Authors:Hughes, M.P, Taylor, J.P, Yang, Z.
Deposit date:2023-07-14
Release date:2024-03-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Interaction between host G3BP and viral nucleocapsid protein regulates SARS-CoV-2 replication and pathogenicity.
Cell Rep, 43, 2024
8TH6
DownloadVisualize
BU of 8th6 by Molmil
Crystal Structure of the G3BP1 NTF2-like domain bound to USP10 peptide
Descriptor: 1,2-ETHANEDIOL, Ras GTPase-activating protein-binding protein 1, Ubiquitin carboxyl-terminal hydrolase 10
Authors:Hughes, M.P, Taylor, J.P, Yang, Z.
Deposit date:2023-07-14
Release date:2024-03-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Interaction between host G3BP and viral nucleocapsid protein regulates SARS-CoV-2 replication and pathogenicity.
Cell Rep, 43, 2024
8TH5
DownloadVisualize
BU of 8th5 by Molmil
Crystal Structure of the G3BP1 NTF2-like domain bound to the IDR1 of SARS-CoV-2 nucleocapsid protein P13L mutant
Descriptor: Nucleoprotein, Ras GTPase-activating protein-binding protein 1
Authors:Hughes, M.P, Taylor, J.P, Yang, Z.
Deposit date:2023-07-13
Release date:2024-03-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Interaction between host G3BP and viral nucleocapsid protein regulates SARS-CoV-2 replication and pathogenicity.
Cell Rep, 43, 2024
8A0X
DownloadVisualize
BU of 8a0x by Molmil
Crystal structure of the HigB2-HigA2 tetramer in complex with operator DNA
Descriptor: Antitoxin HigA-2, DNA (30-MER), DNA (31-MER), ...
Authors:Hadzi, S, Loris, R.
Deposit date:2022-05-30
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.296 Å)
Cite:Fuzzy DNA recognition by a prokaryotic transcription factor
To Be Published
2R8J
DownloadVisualize
BU of 2r8j by Molmil
Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNA
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Cisplatin, ...
Authors:Carell, T, Alt, A, Lammens, K.
Deposit date:2007-09-11
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Bypass of DNA lesions generated during anticancer treatment with cisplatin by DNA polymerase eta
Science, 318, 2007
2R8K
DownloadVisualize
BU of 2r8k by Molmil
Structure of the Eukaryotic DNA Polymerase eta in complex with 1,2-d(GpG)-cisplatin containing DNA
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*DGP*DTP*DGP*DGP*DTP*DGP*DAP*DGP*DC)-3', 5'-D(P*DGP*DGP*DCP*DTP*DCP*DAP*DCP*DCP*DAP*DC)-3', ...
Authors:Carell, T, Alt, A, Lammens, K.
Deposit date:2007-09-11
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Bypass of DNA lesions generated during anticancer treatment with cisplatin by DNA polymerase eta
Science, 318, 2007
8A8E
DownloadVisualize
BU of 8a8e by Molmil
PPSA C terminal octahedral structure
Descriptor: Phosphoenolpyruvate synthase
Authors:Song, W.
Deposit date:2022-06-22
Release date:2023-07-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Survival strategies in the heat Lysine acetylation stabilizes the quaternary structure of a Mega-Dalton hyperthermophilic PEP-synthase
To Be Published
1WN6
DownloadVisualize
BU of 1wn6 by Molmil
Crystal Structure of Blasticidin S Deaminase (BSD) Complexed with Tetrahedral Intermediate of Blasticidin S
Descriptor: 6-(4-AMINO-4-HYDROXY-2-OXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-3-[3-AMINO-5-(N-METHYL-GUANIDINO)-PENT ANOYLAMINO]-3,6-DIHYDRO-2H-PYRAN-2-CARBOXYLIC ACID, ARSENIC, Blasticidin-S deaminase, ...
Authors:Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T.
Deposit date:2004-07-27
Release date:2005-10-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc
J.Biol.Chem., 282, 2007
8AAA
DownloadVisualize
BU of 8aaa by Molmil
Crystal structure of SARS-CoV-2 S RBD in complex with a stapled peptide
Descriptor: 1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one, Spike protein S1, Stapled peptide
Authors:Brear, P, Chen, L, Gaynor, K, Harman, M, Dods, R, Hyvonen, M.
Deposit date:2022-06-30
Release date:2023-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Multivalent bicyclic peptides are an effective antiviral modality that can potently inhibit SARS-CoV-2.
Nat Commun, 14, 2023
4ADT
DownloadVisualize
BU of 4adt by Molmil
Crystal structure of plasmodial PLP synthase
Descriptor: PHOSPHATE ION, PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE, PUTATIVE
Authors:Guedez, G, Sinning, I, Tews, I.
Deposit date:2012-01-03
Release date:2012-01-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Assembly of the Eukaryotic Plp-Synthase Complex from Plasmodium and Activation of the Pdx1 Enzyme.
Structure, 20, 2012
8UQT
DownloadVisualize
BU of 8uqt by Molmil
Crystal structure of the Tree Shrew p53 tetramerization domain
Descriptor: Cellular tumor antigen p53, SULFATE ION
Authors:Wahba, H.M, Sakaguchi, S, Nakagawa, N, Wada, J, Kamada, R, Sakaguchi, K, Omichinski, J.G.
Deposit date:2023-10-24
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Highly Similar Tetramerization Domains from the p53 Protein of Different Mammalian Species Possess Varying Biophysical, Functional and Structural Properties.
Int J Mol Sci, 24, 2023
8UQS
DownloadVisualize
BU of 8uqs by Molmil
Crystal structure of the Opossum p53 tetramerization domain
Descriptor: Cellular tumor antigen p53 (Fragment)
Authors:Wahba, H.M, Sakaguchi, S, Nakagawa, N, Wada, J, Kamada, R, Sakaguchi, K, Omichinski, J.G.
Deposit date:2023-10-24
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Highly Similar Tetramerization Domains from the p53 Protein of Different Mammalian Species Possess Varying Biophysical, Functional and Structural Properties.
Int J Mol Sci, 24, 2023
4ADU
DownloadVisualize
BU of 4adu by Molmil
Crystal structure of plasmodial PLP synthase with bound R5P intermediate
Descriptor: 1,2-ETHANEDIOL, PYRIDOXINE BIOSYNTHETIC ENZYME PDX1 HOMOLOGUE, PUTATIVE, ...
Authors:Guedez, G, Sinning, I, Tews, I.
Deposit date:2012-01-03
Release date:2012-01-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Assembly of the Eukaryotic Plp-Synthase Complex from Plasmodium and Activation of the Pdx1 Enzyme.
Structure, 20, 2012
8UQR
DownloadVisualize
BU of 8uqr by Molmil
Crystal structure of the human p53 tetramerization domain
Descriptor: Cellular tumor antigen p53
Authors:Wahba, H.M, Sakaguchi, S, Nakagawa, N, Wada, J, Kamada, R, Sakaguchi, K, Omichinski, J.G.
Deposit date:2023-10-24
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Highly Similar Tetramerization Domains from the p53 Protein of Different Mammalian Species Possess Varying Biophysical, Functional and Structural Properties.
Int J Mol Sci, 24, 2023
8RQ4
DownloadVisualize
BU of 8rq4 by Molmil
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in complex with probenecid
Descriptor: 4-(dipropylsulfamoyl)benzoic acid, ATP-binding cassette sub-family C member 2, CHOLESTEROL HEMISUCCINATE
Authors:Mazza, T, Beis, K.
Deposit date:2024-01-17
Release date:2024-02-14
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structural basis for the modulation of MRP2 activity by phosphorylation and drugs.
Nat Commun, 15, 2024
4J9E
DownloadVisualize
BU of 4j9e by Molmil
Crystal structure of the N114A mutant of the Abl-SH3 domain complexed with the high affinity peptide P17
Descriptor: P17, SULFATE ION, Tyrosine-protein kinase ABL1
Authors:Camara-Artigas, A.
Deposit date:2013-02-16
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the N114A mutant of the Abl-SH3 domain complexed with the high affinity peptide P17
To be Published
8RQ3
DownloadVisualize
BU of 8rq3 by Molmil
Cryo-em structure of the rat Multidrug resistance-associated protein 2 (rMrp2) in an autoinhibited state (nucleotide-free)
Descriptor: ATP-binding cassette sub-family C member 2
Authors:Mazza, T, Beis, K.
Deposit date:2024-01-17
Release date:2024-02-14
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structural basis for the modulation of MRP2 activity by phosphorylation and drugs.
Nat Commun, 15, 2024
1CRG
DownloadVisualize
BU of 1crg by Molmil
THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Berghuis, A.M, Brayer, G.D.
Deposit date:1993-08-06
Release date:1994-01-31
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c.
J.Mol.Biol., 236, 1994
1JIF
DownloadVisualize
BU of 1jif by Molmil
Crystal structure of bleomycin-binding protein from bleomycin-producing Streptomyces verticillus complexed with copper(II)-bleomycin
Descriptor: BLEOMYCIN A2, CHLORIDE ION, COPPER (II) ION, ...
Authors:Sugiyama, M, Kumagai, T, Hayashida, M, Maruyama, M, Matoba, Y.
Deposit date:2001-07-02
Release date:2002-02-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The 1.6-A crystal structure of the copper(II)-bound bleomycin complexed with the bleomycin-binding protein from bleomycin-producing Streptomyces verticillus.
J.Biol.Chem., 277, 2002
7QM2
DownloadVisualize
BU of 7qm2 by Molmil
Crystal structure of the PP1/PTG/beta-cyclodextrin ternary complex
Descriptor: Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Protein phosphatase 1 regulatory subunit 3C, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit
Authors:Semrau, M.S, Storici, P, Lolli, G.
Deposit date:2021-12-20
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.685 Å)
Cite:Molecular architecture of the glycogen- committed PP1/PTG holoenzyme.
Nat Commun, 13, 2022
3GHM
DownloadVisualize
BU of 3ghm by Molmil
Crystal structure of the exosite-containing fragment of human ADAMTS13 (form-1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A disintegrin and metalloproteinase with thrombospondin motifs 13, ...
Authors:Akiyama, M, Takeda, S, Kokame, K, Takagi, J, Miyata, T.
Deposit date:2009-03-04
Release date:2009-10-27
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of the non-catalytic domains of ADAMTS13 reveal multiple discontinuous exosites for von Willebrand factor
To be Published

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon