Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3SQ2
DownloadVisualize
BU of 3sq2 by Molmil
RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (AT rich sequence)
Descriptor: 5'-D(*AP*AP*TP*TP*AP*AP*TP*TP*AP*AP*TP*TP*(2DA))-3', 5'-D(P*CP*(2PR)P*TP*AP*AP*TP*TP*AP*AP*TP*TP*AP*AP*TP*TP*G)-3', CALCIUM ION, ...
Authors:Xia, S, Konigsberg, W.H, Wang, J.
Deposit date:2011-07-04
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the 2-Aminopurine-Cytosine Base Pair Formed in the Polymerase Active Site of the RB69 Y567A-DNA Polymerase.
Biochemistry, 50, 2011
4RHO
DownloadVisualize
BU of 4rho by Molmil
Crystal structure of a hypothetical protein (BPSL2088) from Burkholderia pseudomallei K96243 at 2.25 A resolution
Descriptor: TRIETHYLENE GLYCOL, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-10-02
Release date:2014-12-10
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of a hypothetical protein (BPSL2088) from Burkholderia pseudomallei K96243 at 2.25 A resolution
To be published
4QTE
DownloadVisualize
BU of 4qte by Molmil
Structure of ERK2 in complex with VTX-11e, 4-{2-[(2-CHLORO-4-FLUOROPHENYL)AMINO]-5-METHYLPYRIMIDIN-4-YL}-N-[(1S)-1-(3-CHLOROPHENYL)-2-HYDROXYETHYL]-1H-PYRROLE-2-CARBOXAMIDE
Descriptor: 1,2-ETHANEDIOL, 4-{2-[(2-chloro-4-fluorophenyl)amino]-5-methylpyrimidin-4-yl}-N-[(1S)-1-(3-chlorophenyl)-2-hydroxyethyl]-1H-pyrrole-2-carboxamide, CHLORIDE ION, ...
Authors:Chaikuad, A, Savitsky, P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2014-07-07
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A unique inhibitor binding site in ERK1/2 is associated with slow binding kinetics.
Nat.Chem.Biol., 10, 2014
4RDB
DownloadVisualize
BU of 4rdb by Molmil
Crystal structure of an immunoreactive 32 kDa antigen PG49 (PG_0181) from Porphyromonas gingivalis W83 at 1.45 A resolution (PSI Community Target, Nakayama)
Descriptor: 1,2-ETHANEDIOL, ACETONE, Immunoreactive 32 kDa antigen PG49
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-09-18
Release date:2014-12-03
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Distinct Type of Pilus from the Human Microbiome.
Cell, 165, 2016
4QTA
DownloadVisualize
BU of 4qta by Molmil
Structure of human ERK2 in complex with SCH772984 revealing a novel inhibitor-induced binding pocket
Descriptor: (3R)-1-(2-oxo-2-{4-[4-(pyrimidin-2-yl)phenyl]piperazin-1-yl}ethyl)-N-[3-(pyridin-4-yl)-2H-indazol-5-yl]pyrrolidine-3-carboxamide, 1,2-ETHANEDIOL, Mitogen-activated protein kinase 1, ...
Authors:Chaikuad, A, Savitsky, P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2014-07-07
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A unique inhibitor binding site in ERK1/2 is associated with slow binding kinetics.
Nat.Chem.Biol., 10, 2014
4QTL
DownloadVisualize
BU of 4qtl by Molmil
Crystal structure of human carbonic anhydrase isozyme II with inhibitor
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-(benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Smirnov, A, Manakova, E, Grazulis, S.
Deposit date:2014-07-08
Release date:2015-04-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Functionalization of Fluorinated Benzenesulfonamides and Their Inhibitory Properties toward Carbonic Anhydrases
Chemmedchem, 10, 2015
4R79
DownloadVisualize
BU of 4r79 by Molmil
Mos1 transposase paired-end complex with left transposon end
Descriptor: MANGANESE (II) ION, Mariner Mos1 transposase, SULFATE ION, ...
Authors:Richardson, J.M.
Deposit date:2014-08-27
Release date:2015-04-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for the Inverted Repeat Preferences of mariner Transposases.
J.Biol.Chem., 290, 2015
4R92
DownloadVisualize
BU of 4r92 by Molmil
BACE-1 in complex with (R)-4-(2-cyclohexylethyl)-4-(((1S,3R)-3-(isonicotinamido)cyclohexyl)methyl)-1-methyl-5-oxoimidazolidin-2-iminium
Descriptor: Beta-secretase 1, L(+)-TARTARIC ACID, N-[(1R,3S)-3-{[(2E,4R)-4-(2-cyclohexylethyl)-2-imino-1-methyl-5-oxoimidazolidin-4-yl]methyl}cyclohexyl]pyridine-4-carboxamide
Authors:Orth, P, Strickland, C, Caldwell, J.P.
Deposit date:2014-09-03
Release date:2014-11-05
Last modified:2014-12-17
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Discovery of potent iminoheterocycle BACE1 inhibitors.
Bioorg.Med.Chem.Lett., 24, 2014
4R62
DownloadVisualize
BU of 4r62 by Molmil
Structure of Rad6~Ub
Descriptor: ACETATE ION, Ubiquitin-40S ribosomal protein S27a, Ubiquitin-conjugating enzyme E2 2
Authors:Kumar, P, Wolberger, C.
Deposit date:2014-08-22
Release date:2015-09-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Role of a non-canonical surface of Rad6 in ubiquitin conjugating activity.
Nucleic Acids Res., 43, 2015
3SUO
DownloadVisualize
BU of 3suo by Molmil
RB69 DNA Polymerase (Y567A) Ternary Complex with dTTP Opposite 2AP (GC rich sequence)
Descriptor: 5'-D(*CP*GP*CP*GP*CP*GP*GP*CP*GP*GP*CP*GP*(2DA))-3', 5'-D(P*CP*(2PR)P*TP*CP*GP*CP*CP*GP*CP*CP*GP*CP*GP*CP*GP*G)-3', CALCIUM ION, ...
Authors:Xia, S, Konigsberg, W.H, Wang, J.
Deposit date:2011-07-11
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure of the 2-Aminopurine-Cytosine Base Pair Formed in the Polymerase Active Site of the RB69 Y567A-DNA Polymerase.
Biochemistry, 50, 2011
4R91
DownloadVisualize
BU of 4r91 by Molmil
BACE-1 in complex with (R)-4-(2-cyclohexylethyl)-4-(((1S,3R)-3-(cyclopentylamino)cyclohexyl)methyl)-1-methyl-5-oxoimidazolidin-2-iminium
Descriptor: (2E,5R)-5-(2-cyclohexylethyl)-5-{[(1S,3R)-3-(cyclopentylamino)cyclohexyl]methyl}-2-imino-3-methylimidazolidin-4-one, Beta-secretase 1, L(+)-TARTARIC ACID
Authors:Orth, P, Caldwell, J.P, Strickland, C.
Deposit date:2014-09-03
Release date:2014-11-05
Last modified:2014-12-17
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Discovery of potent iminoheterocycle BACE1 inhibitors.
Bioorg.Med.Chem.Lett., 24, 2014
4QRJ
DownloadVisualize
BU of 4qrj by Molmil
Crystal structure of a putative 6-phosphogluconolactonase (BACUNI_04672) from Bacteroides uniformis ATCC 8492 at 2.20 A resolution
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, putative 6-phosphogluconolactonase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-07-01
Release date:2014-07-23
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a putative 6-phosphogluconolactonase (BACUNI_04672) from Bacteroides uniformis ATCC 8492 at 2.20 A resolution
To be published
4QVU
DownloadVisualize
BU of 4qvu by Molmil
Crystal structure of a DUF4931 family protein (BCE0241) from Bacillus cereus ATCC 10987 at 2.65 A resolution
Descriptor: SODIUM ION, TETRAETHYLENE GLYCOL, Uncharacterized protein, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-07-15
Release date:2014-08-06
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of a hypothetical protein (BCE0241) from Bacillus cereus ATCC 10987 at 2.65 A resolution
To be published
4QY7
DownloadVisualize
BU of 4qy7 by Molmil
Crystal structure of a yobA protein (BSU18810) from Bacillus subtilis subsp. subtilis str. 168 at 1.55 A resolution
Descriptor: NONAETHYLENE GLYCOL, Uncharacterized protein YobA
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-07-23
Release date:2014-08-20
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of a hypothetical protein (yobA) from Bacillus subtilis subsp. subtilis str. 168 at 1.55 A resolution
To be published
4R7F
DownloadVisualize
BU of 4r7f by Molmil
Crystal structure of a hypothetical protein (PARMER_01801) from Parabacteroides merdae ATCC 43184 at 2.30 A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-08-27
Release date:2014-12-17
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a hypothetical protein (PARMER_01801) from Parabacteroides merdae ATCC 43184 at 2.30 A resolution
To be published
4QRL
DownloadVisualize
BU of 4qrl by Molmil
Crystal structure of a lipocalin-like protein (BACUNI_01346) from Bacteroides uniformis ATCC 8492 at 1.79 A resolution
Descriptor: 1,2-ETHANEDIOL, Hypothetical protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-07-01
Release date:2014-08-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of a hypothetical protein (BACUNI_01346) from Bacteroides uniformis ATCC 8492 at 1.79 A resolution
To be Published
4QTB
DownloadVisualize
BU of 4qtb by Molmil
Structure of human ERK1 in complex with SCH772984 revealing a novel inhibitor-induced binding pocket
Descriptor: (3R)-1-(2-oxo-2-{4-[4-(pyrimidin-2-yl)phenyl]piperazin-1-yl}ethyl)-N-[3-(pyridin-4-yl)-2H-indazol-5-yl]pyrrolidine-3-carboxamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Chaikuad, A, Keates, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2014-07-07
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A unique inhibitor binding site in ERK1/2 is associated with slow binding kinetics.
Nat.Chem.Biol., 10, 2014
4P36
DownloadVisualize
BU of 4p36 by Molmil
Crystal structure of DJ-1 With Zn(II) bound (crystal 2)
Descriptor: 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, Protein DJ-1, ZINC ION
Authors:Tashiro, S, Wu, C.-X, Hoang, Q.Q, Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2014-03-05
Release date:2014-04-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.182 Å)
Cite:Thermodynamic and Structural Characterization of the Specific Binding of Zn(II) to Human Protein DJ-1.
Biochemistry, 53, 2014
4P3E
DownloadVisualize
BU of 4p3e by Molmil
Structure of the human SRP S domain
Descriptor: MAGNESIUM ION, SRP RNA (124-mer), Signal recognition particle 19 kDa protein, ...
Authors:Grotwinkel, J.T, Wild, K, Sinning, I.
Deposit date:2014-03-07
Release date:2014-04-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:SRP RNA remodeling by SRP68 explains its role in protein translocation.
Science, 344, 2014
4P35
DownloadVisualize
BU of 4p35 by Molmil
Crystal structure of DJ-1 with Zinc(II) bound (crystal I)
Descriptor: CHLORIDE ION, GLYCEROL, Protein DJ-1, ...
Authors:Tashiro, S, Wu, C.-X, Hoang, Q.Q, Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2014-03-05
Release date:2014-04-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Thermodynamic and Structural Characterization of the Specific Binding of Zn(II) to Human Protein DJ-1.
Biochemistry, 53, 2014
4PH8
DownloadVisualize
BU of 4ph8 by Molmil
Crystal structure of AggA, the major subunit of aggregative adherence fimbriae type I (AAF/I) from the Escherichia coli O4H104
Descriptor: Aggregative adherence fimbrial subunit AggA, GLYCEROL
Authors:Pakharukova, N.A, Tuitilla, M, Zavialov, A.V.
Deposit date:2014-05-05
Release date:2014-10-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Insight into Host Recognition by Aggregative Adherence Fimbriae of Enteroaggregative Escherichia coli.
Plos Pathog., 10, 2014
4P4J
DownloadVisualize
BU of 4p4j by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor T33D
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Barinka, C.
Deposit date:2014-03-12
Release date:2015-05-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Design of composite inhibitors targeting glutamate carboxypeptidase II: the importance of effector functionalities.
Febs J., 283, 2016
4PPY
DownloadVisualize
BU of 4ppy by Molmil
Crystal structure of a putative acylhydrolase (BF3764) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution
Descriptor: Putative acylhydrolase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-02-27
Release date:2014-04-02
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative acylhydrolase (BF3764) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution
To be published
3SQ4
DownloadVisualize
BU of 3sq4 by Molmil
RB69 DNA Polymerase Ternary Complex with dTTP Opposite 2AP (GC rich sequence)
Descriptor: 5'-D(*CP*GP*CP*GP*CP*GP*GP*CP*GP*GP*CP*GP*(2DA))-3', 5'-D(P*CP*(2PR)P*TP*CP*GP*CP*CP*GP*CP*CP*GP*CP*GP*CP*GP*G)-3', CALCIUM ION, ...
Authors:Xia, S, Konigsberg, W.H, Wang, J.
Deposit date:2011-07-04
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structure of the 2-Aminopurine-Cytosine Base Pair Formed in the Polymerase Active Site of the RB69 Y567A-DNA Polymerase.
Biochemistry, 50, 2011
3SUQ
DownloadVisualize
BU of 3suq by Molmil
RB69 DNA Polymerase (Y567A) Ternary Complex with dCTP Opposite 2AP (AT rich sequence)
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*AP*AP*TP*TP*AP*AP*TP*TP*AP*AP*TP*TP*(2DA))-3', 5'-D(P*CP*(2PR)P*TP*AP*AP*TP*TP*AP*AP*TP*TP*AP*AP*TP*TP*G)-3', ...
Authors:Xia, S, Konigsberg, W.H, Wang, J.
Deposit date:2011-07-11
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structure of the 2-Aminopurine-Cytosine Base Pair Formed in the Polymerase Active Site of the RB69 Y567A-DNA Polymerase.
Biochemistry, 50, 2011

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon