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6LSF
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BU of 6lsf by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C2S6RA/C2S6RB form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), ...
Authors:Wang, M, Shu, B, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.152 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
6LSH
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BU of 6lsh by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C2S6M form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), ...
Authors:Li, R, Wang, M, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.231 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
8WA1
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BU of 8wa1 by Molmil
The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC2
Descriptor: DNA (24-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wu, X.X, Zhang, Y.
Deposit date:2023-09-06
Release date:2024-03-13
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
8WA0
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BU of 8wa0 by Molmil
The cryo-EM structure of the Nicotiana tabacum PEP-PAP-TEC1
Descriptor: DNA (48-mer), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Wu, X.X, Zhang, Y.
Deposit date:2023-09-06
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
6LSG
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BU of 6lsg by Molmil
Crystal structure of the enterovirus 71 polymerase elongation complex (C0S6M form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3'), ...
Authors:Li, R, Wang, M, Jing, X, Gong, P.
Deposit date:2020-01-17
Release date:2020-04-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Nat Commun, 11, 2020
5F8I
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BU of 5f8i by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S2/3 Form)
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, GLYCEROL, Genome polyprotein, ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8M
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BU of 5f8m by Molmil
Enterovirus 71 Polymerase Elongation Complex (C3S4/5 Form)
Descriptor: GLYCEROL, Genome polyprotein, MAGNESIUM ION, ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8G
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BU of 5f8g by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S1 Form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3'), ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8N
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BU of 5f8n by Molmil
Enterovirus 71 Polymerase Elongation Complex (C3S6 Form)
Descriptor: GLYCEROL, Genome polyprotein, PYROPHOSPHATE 2-, ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.484 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8L
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BU of 5f8l by Molmil
Enterovirus 71 Polymerase Elongation Complex (C3S1 Form)
Descriptor: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.812 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5Y6Z
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BU of 5y6z by Molmil
Crystal structure of the coxsackievirus A16 polymerase elongation complex
Descriptor: GLYCEROL, Genome polyprotein, MAGNESIUM ION, ...
Authors:Bi, P, Shu, B, Gong, P.
Deposit date:2017-08-15
Release date:2017-12-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the coxsackievirus A16 RNA-dependent RNA polymerase elongation complex reveals novel features in motif A dynamics
Virol Sin, 32, 2017
5F8H
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BU of 5f8h by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S1/2 Form)
Descriptor: Genome polyprotein, MAGNESIUM ION, RNA (35-MER), ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8J
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BU of 5f8j by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S4 Form)
Descriptor: GLYCEROL, Genome polyprotein, MAGNESIUM ION, ...
Authors:Shu, B, Gong, P.
Deposit date:2015-12-09
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.675 Å)
Cite:Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
4XLQ
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BU of 4xlq by Molmil
Crystal structure of T.aquaticus transcription initiation complex containing upstream fork (-11 base-paired) promoter
Descriptor: DNA (26-MER), DNA (30-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Bae, B, Darst, S.A.
Deposit date:2015-01-13
Release date:2015-09-23
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (4.6 Å)
Cite:Structure of a bacterial RNA polymerase holoenzyme open promoter complex.
Elife, 4, 2015
4XLP
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BU of 4xlp by Molmil
Crystal structure of T.aquaticus transcription initiation complex containing upstream fork promoter
Descriptor: DNA (25-MER), DNA (30-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Bae, B, Darst, S.A.
Deposit date:2015-01-13
Release date:2015-09-23
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structure of a bacterial RNA polymerase holoenzyme open promoter complex.
Elife, 4, 2015
4Y2C
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BU of 4y2c by Molmil
M300V 3D polymerase mutant of EMCV
Descriptor: GLYCEROL, Genome polyprotein
Authors:Verdaguer, N, Ferrer-Orta, C, Vives-Adrian, L.
Deposit date:2015-02-09
Release date:2015-04-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The RNA Template Channel of the RNA-Dependent RNA Polymerase as a Target for Development of Antiviral Therapy of Multiple Genera within a Virus Family.
Plos Pathog., 11, 2015
6L6V
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BU of 6l6v by Molmil
SPO1 Gp44 N-terminal region (1-55)
Descriptor: E3 protein
Authors:Liu, B, Wang, Z.
Deposit date:2019-10-29
Release date:2021-05-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Bacteriophage DNA Mimic Protein Employs a Non-specific Strategy to Inhibit the Bacterial RNA Polymerase.
Front Microbiol, 12, 2021
8QN8
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BU of 8qn8 by Molmil
Mycobacterium smegmatis RNA polymerase in complex with HelD, SigA and RbpA in State II
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Koval, T, Krasny, L, Dohnalek, J, Kouba, T.
Deposit date:2023-09-25
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published
8QU6
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BU of 8qu6 by Molmil
Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD and an upstream-fork promoter fragment
Descriptor: DNA 22-MER, DNA 31-MER, DNA-directed RNA polymerase subunit alpha, ...
Authors:Koval, T, Krasny, L, Dohnalek, J, Kouba, T.
Deposit date:2023-10-13
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published
8EOE
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BU of 8eoe by Molmil
Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_LG)
Descriptor: DNA (35-MER), DNA (38-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Vishwakarm, R.K, Murakami, K.S.
Deposit date:2022-10-03
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EHQ
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BU of 8ehq by Molmil
Mycobacterium tuberculosis paused transcription complex with Bacillus subtilis NusG
Descriptor: DNA (38-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Vishwakarma, R.K, Murakami, K.S.
Deposit date:2022-09-14
Release date:2023-02-01
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Allosteric mechanism of transcription inhibition by NusG-dependent pausing of RNA polymerase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8R6P
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BU of 8r6p by Molmil
Mycobacterium smegnatis RNA polymerase RP2-like transcription initiation complex with SigmaA, RbpA, HelD N-terminal domain and open promoter DNA
Descriptor: DNA 50-MER, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Koval, T, Krasny, L, Dohnalek, J, Kouba, T.
Deposit date:2023-11-22
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published
8R6R
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BU of 8r6r by Molmil
Mycobacterium smegnatis RNA polymerase RP2-like transcription initiation complex with SigmaA, RbpA and open promoter DNA
Descriptor: DNA 50-MER, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Koval, T, Krasny, L, Dohnalek, J, Kouba, T.
Deposit date:2023-11-22
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.89 Å)
Cite:Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published
8R3M
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BU of 8r3m by Molmil
Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD N-terminal, CO and PCh loop domain, and an upstream-fork promoter fragment; State III conformation
Descriptor: DNA 22-MER, DNA 31-MER, DNA-directed RNA polymerase subunit alpha, ...
Authors:Koval, T, Krasny, L, Dohnalek, J, Kouba, T.
Deposit date:2023-11-09
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published
8R2M
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BU of 8r2m by Molmil
Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD N-terminal domain and an upstream-fork promoter fragment; State III conformation
Descriptor: DNA 22-MER, DNA 31-MER, DNA-directed RNA polymerase subunit alpha, ...
Authors:Koval, T, Krasny, L, Dohnalek, J, Kouba, T.
Deposit date:2023-11-06
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Molecular insights into RNA polymerase recycling by mycobacterial HelD
To Be Published

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数据于2024-11-06公开中

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