Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8FQX
DownloadVisualize
BU of 8fqx by Molmil
Carbonic Anhydrase II in complex with the alkyl ureas 3g
Descriptor: 4-hydroxy-3-({[(pyridin-4-yl)methyl]carbamoyl}amino)benzene-1-sulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:Combs, J.E, McKenna, R.
Deposit date:2023-01-06
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.496 Å)
Cite:New Insights into Conformationally Restricted Carbonic Anhydrase Inhibitors.
Molecules, 28, 2023
8FQZ
DownloadVisualize
BU of 8fqz by Molmil
Carbonic Anhydrase II in complex with the alkyl urea 3j
Descriptor: 4-hydroxy-3-{[(4-hydroxybutyl)carbamoyl]amino}benzene-1-sulfonamide, Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ...
Authors:Combs, J.C, McKenna, R.
Deposit date:2023-01-06
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.467 Å)
Cite:New Insights into Conformationally Restricted Carbonic Anhydrase Inhibitors.
Molecules, 28, 2023
8VMB
DownloadVisualize
BU of 8vmb by Molmil
The crystal structure of rhinovirus C15 RNA replication element sB-loop mutant in complex with Fab BL3-6
Descriptor: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (83-MER)
Authors:Das, N.K, Koirala, D.
Deposit date:2024-01-13
Release date:2024-07-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Structural basis for a highly conserved RNA-mediated enteroviral genome replication.
Nucleic Acids Res., 52, 2024
1BK4
DownloadVisualize
BU of 1bk4 by Molmil
CRYSTAL STRUCTURE OF RABBIT LIVER FRUCTOSE-1,6-BISPHOSPHATASE AT 2.3 ANGSTROM RESOLUTION
Descriptor: MAGNESIUM ION, PROTEIN (FRUCTOSE-1,6-BISPHOSPHATASE), SULFATE ION
Authors:Ghosh, D, Weeks, C.M, Erman, M, Roszak, A.W, Kaiser, R, Jornvall, H.
Deposit date:1998-07-14
Release date:1998-07-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of rabbit liver fructose 1,6-bisphosphatase at 2.3 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
8FR1
DownloadVisualize
BU of 8fr1 by Molmil
Carbonic Anhydrase IX in complex with the alkyl urea compound 3g
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-hydroxy-3-({[(pyridin-4-yl)methyl]carbamoyl}amino)benzene-1-sulfonamide, Carbonic anhydrase 2, ...
Authors:Combs, J.C, McKenna, R.
Deposit date:2023-01-06
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:New Insights into Conformationally Restricted Carbonic Anhydrase Inhibitors.
Molecules, 28, 2023
8FQY
DownloadVisualize
BU of 8fqy by Molmil
Carbonic Anhydrase II in complex with the alkyl urea 3h
Descriptor: 4-hydroxy-3-({[2-(pyridin-2-yl)ethyl]carbamoyl}amino)benzene-1-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Combs, J.C, McKenna, R.
Deposit date:2023-01-06
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.466 Å)
Cite:New Insights into Conformationally Restricted Carbonic Anhydrase Inhibitors.
Molecules, 28, 2023
8FR2
DownloadVisualize
BU of 8fr2 by Molmil
Carbonic Anhydrase IX-mimic in complex with the alkyl urea compound 3h
Descriptor: 4-hydroxy-3-({[2-(pyridin-2-yl)ethyl]carbamoyl}amino)benzene-1-sulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Combs, J.C, McKenna, R.
Deposit date:2023-01-06
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.307 Å)
Cite:New Insights into Conformationally Restricted Carbonic Anhydrase Inhibitors.
Molecules, 28, 2023
8PEG
DownloadVisualize
BU of 8peg by Molmil
Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
Authors:Fluegel, T, Schacherl, M.
Deposit date:2023-06-13
Release date:2024-03-06
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8PKL
DownloadVisualize
BU of 8pkl by Molmil
Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Fluegel, T, Schacherl, M.
Deposit date:2023-06-26
Release date:2024-03-06
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8FR4
DownloadVisualize
BU of 8fr4 by Molmil
Carbonic Anhydrase IX-mimic in complex with the alkyl urea compound 3j
Descriptor: 4-hydroxy-3-{[(4-hydroxybutyl)carbamoyl]amino}benzene-1-sulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Combs, J.E, McKenna, R.
Deposit date:2023-01-06
Release date:2023-02-01
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.123 Å)
Cite:New Insights into Conformationally Restricted Carbonic Anhydrase Inhibitors.
Molecules, 28, 2023
8FCS
DownloadVisualize
BU of 8fcs by Molmil
Structure of pre-miR-31 reveals an active role in Dicer processing
Descriptor: microRNA 31
Authors:Kotar, A, Ma, S, Keane, S.
Deposit date:2022-12-01
Release date:2023-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of pre-miR-31 reveals an active role in Dicer processing.
Biorxiv, 2023
8FFJ
DownloadVisualize
BU of 8ffj by Molmil
Structure of Zanidatamab bound to HER2
Descriptor: Receptor tyrosine-protein kinase erbB-2, Zanidatamab Heavy Chain A, Zanidatamab Heavy Chain B, ...
Authors:Worrall, L.J, Atkinson, C.E, Sanches, M, Dixit, S, Strynadka, N.C.J.
Deposit date:2022-12-08
Release date:2023-02-22
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:An anti-HER2 biparatopic antibody that induces unique HER2 clustering and complement-dependent cytotoxicity.
Nat Commun, 14, 2023
1BQH
DownloadVisualize
BU of 1bqh by Molmil
MURINE CD8AA ECTODOMAIN FRAGMENT IN COMPLEX WITH H-2KB/VSV8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (BETA-2-MICROGLOBULIN ), PROTEIN (CD8A OR LYT2 OR LYT-2), ...
Authors:Wang, J.H, Reinherz, E.L, Kern, P.S, Chang, H.C.
Deposit date:1998-08-16
Release date:1998-08-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of CD8 coreceptor function revealed by crystallographic analysis of a murine CD8alphaalpha ectodomain fragment in complex with H-2Kb.
Immunity, 9, 1998
5ZZT
DownloadVisualize
BU of 5zzt by Molmil
The crystal structure of Mandelate oxidase with 3,3-difluoro-2-hydroxy-3-phenylpropionic acid
Descriptor: (2R)-3,3-difluoro-2-hydroxy-3-phenylpropanoic acid, 4-hydroxymandelate oxidase, FLAVIN MONONUCLEOTIDE
Authors:Li, T.L, Lin, K.H.
Deposit date:2018-06-04
Release date:2019-06-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and chemical trapping of flavin-oxide intermediates reveals substrate-directed reaction multiplicity.
Protein Sci., 29, 2020
6A1N
DownloadVisualize
BU of 6a1n by Molmil
Mandelate oxidase mutant-Y128F with (2R,3S)-3-fluoro-2-hydroxy-3-phenylpropanoic acid
Descriptor: (2R,3S)-3-fluoro-2-hydroxy-3-phenylpropanoic acid, 4-hydroxymandelate oxidase, FLAVIN MONONUCLEOTIDE, ...
Authors:Li, T.L, Lin, K.H.
Deposit date:2018-06-07
Release date:2019-06-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.421 Å)
Cite:Structural and chemical trapping of flavin-oxide intermediates reveals substrate-directed reaction multiplicity.
Protein Sci., 29, 2020
6A1W
DownloadVisualize
BU of 6a1w by Molmil
Mandelate oxidase with the enoyl FMN epoxide adduct
Descriptor: 1-[(1aR,11R)-11-acetyl-8,9-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]oxazireno[3,2-e]pteridin-11-ium-6(2H)-yl]-1-deoxy-5-O-phosphono-D-ribitol, 4-hydroxymandelate oxidase, MAGNESIUM ION
Authors:Li, T.L, Lin, K.H.
Deposit date:2018-06-08
Release date:2019-06-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and chemical trapping of flavin-oxide intermediates reveals substrate-directed reaction multiplicity.
Protein Sci., 29, 2020
1BMR
DownloadVisualize
BU of 1bmr by Molmil
ALPHA-LIKE TOXIN LQH III FROM SCORPION LEIURUS QUINQUESTRIATUS HEBRAEUS, NMR, 25 STRUCTURES
Descriptor: LQH III ALPHA-LIKE TOXIN
Authors:Krimm, I, Gilles, N, Sautiere, P, Stankiewicz, M, Pelhate, M, Gordon, D, Lancelin, J.-M.
Deposit date:1998-07-24
Release date:1999-02-16
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structures and activity of a novel alpha-like toxin from the scorpion Leiurus quinquestriatus hebraeus.
J.Mol.Biol., 285, 1999
8FIZ
DownloadVisualize
BU of 8fiz by Molmil
Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Florez Ariza, A, Wee, L, Tong, A, Canari, C, Grob, P, Nogales, E, Bustamante, C.
Deposit date:2022-12-18
Release date:2023-03-29
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A trailing ribosome speeds up RNA polymerase at the expense of transcript fidelity via force and allostery.
Cell, 186, 2023
1C0R
DownloadVisualize
BU of 1c0r by Molmil
COMPLEX OF VANCOMYCIN WITH D-LACTIC ACID
Descriptor: CHLORIDE ION, LACTIC ACID, VANCOMYCIN, ...
Authors:Loll, P.J, Kaplan, J, Selinsky, B, Axelsen, P.H.
Deposit date:1999-07-20
Release date:1999-07-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1 Å)
Cite:Vancomycin Binding to Low-Affinity Ligands: Delineating a Minimum Set of Interactions Necessary for High-Affinity Binding.
J.Med.Chem., 42, 1999
8PPR
DownloadVisualize
BU of 8ppr by Molmil
Structure of the human outer kinetochore KMN network complex
Descriptor: Kinetochore protein Spc24, Kinetochore protein Spc25, Kinetochore scaffold 1, ...
Authors:Yatskevich, S, Barford, D.
Deposit date:2023-07-08
Release date:2024-03-20
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of the human outer kinetochore KMN network complex.
Nat.Struct.Mol.Biol., 31, 2024
8PN9
DownloadVisualize
BU of 8pn9 by Molmil
Structure of human oligosaccharyltransferase OST-A complex bound to NGI-1
Descriptor: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, (2~{S},3~{R},4~{R},5~{S},6~{S})-2-(hydroxymethyl)-6-[(1~{S},2~{R},3~{R},4~{R},5'~{S},6~{S},7~{R},8~{S},9~{R},12~{R},13~{R},15~{S},16~{S},18~{R})-5',7,9,13-tetramethyl-3,15-bis(oxidanyl)spiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane-6,2'-oxane]-16-yl]oxy-oxane-3,4,5-triol, (4R,7R)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(undecanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphadocosan-1-aminium, ...
Authors:Ramirez, A.S, Kowal, J, Locher, K.P.
Deposit date:2023-06-30
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:Positive selection CRISPR screens reveal a druggable pocket in an oligosaccharyltransferase required for inflammatory signaling to NF-kappa B.
Cell, 187, 2024
8FI8
DownloadVisualize
BU of 8fi8 by Molmil
Structure of Lettuce C20T bound to DFAME
Descriptor: Lettuce DNA aptamer, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Passalacqua, L.F.M, Ferre-D'Amare, A.R.
Deposit date:2022-12-15
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Intricate 3D architecture of a DNA mimic of GFP.
Nature, 618, 2023
1C3B
DownloadVisualize
BU of 1c3b by Molmil
AMPC BETA-LACTAMASE FROM E. COLI COMPLEXED WITH INHIBITOR, BENZO(B)THIOPHENE-2-BORONIC ACID (BZB)
Descriptor: BENZO[B]THIOPHENE-2-BORONIC ACID, CEPHALOSPORINASE
Authors:Powers, R.A, Blazquez, J, Weston, G.S, Morosini, M.I, Baquero, F, Shoichet, B.K.
Deposit date:1999-07-27
Release date:1999-11-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The complexed structure and antimicrobial activity of a non-beta-lactam inhibitor of AmpC beta-lactamase.
Protein Sci., 8, 1999
8FHZ
DownloadVisualize
BU of 8fhz by Molmil
Structure of Lettuce aptamer bound to DFHO
Descriptor: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, Lettuce DNA aptamer, MAGNESIUM ION, ...
Authors:Passalacqua, L.F.M, Ferre-D'Amare, A.R.
Deposit date:2022-12-15
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Intricate 3D architecture of a DNA mimic of GFP.
Nature, 618, 2023
1BVL
DownloadVisualize
BU of 1bvl by Molmil
HUMANIZED ANTI-LYSOZYME FV
Descriptor: HULYS11
Authors:Holmes, M.A, Foote, J.
Deposit date:1998-09-16
Release date:1999-02-16
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Structural consequences of humanizing an antibody.
J.Immunol., 158, 1997

226707

数据于2024-10-30公开中

PDB statisticsPDBj update infoContact PDBjnumon