Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4W8B
DownloadVisualize
BU of 4w8b by Molmil
Crystal structure of XEG5B, a GH5 xyloglucan-specific beta-1,4-glucanase from ruminal metagenomic library, in complex with XXLG
Descriptor: Exo-xyloglucanase, GLYCEROL, SULFATE ION, ...
Authors:Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
Deposit date:2014-08-22
Release date:2015-03-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
4WEG
DownloadVisualize
BU of 4weg by Molmil
influenza virus neuraminidase N9 in complex 2,3-difluorosialic acid
Descriptor: (2R,3R,4R,5R,6R)-5-acetamido-2,3-difluoro-4-hydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]tetrahydro-2H-pyran-2-carboxylic acid, (3R,4R,5R,6R)-5-(acetylamino)-3-fluoro-4-hydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]-3,4,5,6-tetrahydropyranium-2-carboxylate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Streltsov, V.A, Pilling, P, Barrett, S, McKimm-Breschkin, J.
Deposit date:2014-09-10
Release date:2015-09-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Catalytic mechanism and novel receptor binding sites of human parainfluenza virus type 3 hemagglutinin-neuraminidase (hPIV3 HN)
Antiviral Res., 123, 2015
8E1P
DownloadVisualize
BU of 8e1p by Molmil
Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505-SOSIP.v4.1-GT1.2gp120, ...
Authors:Sarkar, A, Kumar, S, Wilson, I.A.
Deposit date:2022-08-11
Release date:2023-06-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.82 Å)
Cite:Germline-targeting HIV-1 Env vaccination induces VRC01-class antibodies with rare insertions.
Cell Rep Med, 4, 2023
8DP1
DownloadVisualize
BU of 8dp1 by Molmil
Cryo-EM structure of HIV-1 Env(BG505.T332N SOSIP) in complex with DH1030.1 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DH1030.1 Fab Heavy chain, ...
Authors:Gobeil, S, Acharya, P.
Deposit date:2022-07-14
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Shared recognition mechanism for HIV-1 envelope-reactive V3 glycan broadly neutralizing B cell lineage maturation in humans and macaques
To Be Published
8F8O
DownloadVisualize
BU of 8f8o by Molmil
Crystal Structure of the Succinyl-diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii in complex with Succinic and L-Lactic Acids
Descriptor: (2S)-2-HYDROXYPROPANOIC ACID, CITRIC ACID, SUCCINIC ACID, ...
Authors:Minasov, G, Shuvalova, L, Brunzelle, J.S, Dubrovska, I, Pshenychnyi, S, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-11-22
Release date:2022-11-30
Last modified:2023-02-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of the Succinyl-diaminopimelate Desuccinylase (DapE) from Acinetobacter baumannii in complex with Succinic and L-Lactic Acids
To Be Published
7KBE
DownloadVisualize
BU of 7kbe by Molmil
Nucleosome isolated from metaphase chromosome formed in Xenopus egg extract (oligo fraction)
Descriptor: DNA (157-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Arimura, Y, Funabiki, H.
Deposit date:2020-10-02
Release date:2021-09-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7KBD
DownloadVisualize
BU of 7kbd by Molmil
Nucleosome in interphase chromosome formed in Xenopus egg extract (oligo fraction)
Descriptor: DNA (151-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Arimura, Y, Funabiki, H.
Deposit date:2020-10-02
Release date:2021-09-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7K22
DownloadVisualize
BU of 7k22 by Molmil
Murine polyomavirus pentavalent capsomer with 8A7H5 Fab, subparticle reconstruction
Descriptor: 8A7H5 Fab heavy chain, 8A7H5 Fab light chain, Capsid protein VP1
Authors:Goetschius, D.J, Hafenstein, S.L.
Deposit date:2020-09-08
Release date:2020-10-07
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7KDE
DownloadVisualize
BU of 7kde by Molmil
BG505 SOSIP.664 in complex with the V3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8ANC195
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Barnes, C.O, Bjorkman, P.J.
Deposit date:2020-10-08
Release date:2020-10-28
Last modified:2020-11-04
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:A broadly neutralizing macaque monoclonal antibody against the HIV-1 V3-Glycan patch.
Elife, 9, 2020
7KMD
DownloadVisualize
BU of 7kmd by Molmil
Crystal structure of a HIV-1 clade C isolate Du172.17 HR1.R4.664 Env trimer in complex with human Fabs PGT124 and 35O22
Descriptor: 124 Heavy chain, 124 Light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kumar, S, Wilson, I.A.
Deposit date:2020-11-02
Release date:2021-07-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.39228582 Å)
Cite:Neutralizing Antibodies Induced by First-Generation gp41-Stabilized HIV-1 Envelope Trimers and Nanoparticles.
Mbio, 12, 2021
7KLN
DownloadVisualize
BU of 7kln by Molmil
Myoviridae Phage XM1 Neck Region (12-fold)
Descriptor: Head completion protein, gp1, Portal protein
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-30
Release date:2021-11-03
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7L0L
DownloadVisualize
BU of 7l0l by Molmil
Cryo-EM structure of the VRC316 clinical trial, vaccine-elicited, human antibody 316-310-1B11 in complex with an H2 CAN05 HA trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 316-310-1B11 Heavy Chain, 316-310-1B11 Light Chain, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2020-12-11
Release date:2021-11-03
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:A single residue in influenza virus H2 hemagglutinin enhances the breadth of the B cell response elicited by H2 vaccination.
Nat Med, 28, 2022
7G88
DownloadVisualize
BU of 7g88 by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z1148747945
Descriptor: DIMETHYL SULFOXIDE, FORMIC ACID, N-(3-methylpyridin-4-yl)acetamide, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.869 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G8B
DownloadVisualize
BU of 7g8b by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z100643660
Descriptor: DIMETHYL SULFOXIDE, FORMIC ACID, N,1-dimethyl-1H-indole-3-carboxamide, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G8K
DownloadVisualize
BU of 7g8k by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z1217131798
Descriptor: (3M)-3-(2-methyl-1H-imidazol-1-yl)pyridine, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.491 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G8E
DownloadVisualize
BU of 7g8e by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z104479710
Descriptor: 1-(1H-benzimidazol-2-yl)methanamine, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G90
DownloadVisualize
BU of 7g90 by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z1509195674
Descriptor: 4-[(3S)-piperidin-3-yl]-1H-indole, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.911 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G8P
DownloadVisualize
BU of 7g8p by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z1269184613
Descriptor: 1,3-benzothiazole-6-sulfonamide, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.209 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G93
DownloadVisualize
BU of 7g93 by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z1565771450
Descriptor: DIMETHYL SULFOXIDE, FORMIC ACID, N-(8-methyl-1,2,3,4-tetrahydroquinolin-5-yl)acetamide, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.693 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G8S
DownloadVisualize
BU of 7g8s by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z1270393711
Descriptor: 5-(methoxymethyl)-1,2-oxazole-3-carboxamide, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G81
DownloadVisualize
BU of 7g81 by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z104474512
Descriptor: 1-(2-ethoxyphenyl)piperazine, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G94
DownloadVisualize
BU of 7g94 by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z1575337975
Descriptor: (2P)-5-fluoro-2-(1H-pyrazol-5-yl)pyridine, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G97
DownloadVisualize
BU of 7g97 by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z57899718
Descriptor: 2-AMINOMETHYL-PYRIDINE, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G89
DownloadVisualize
BU of 7g89 by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z1192341021
Descriptor: 1-(5-amino-2H-isoindol-2-yl)ethan-1-one, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published
7G98
DownloadVisualize
BU of 7g98 by Molmil
ARHGEF2 PanDDA analysis group deposition -- ARHGEF2 and RhoA in complex with Z4605084898
Descriptor: 1,3-dimethylimidazolidine, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Bradshaw, W.J, Katis, V.L, Bountra, C, von Delft, F, Brennan, P.E.
Deposit date:2023-06-22
Release date:2023-07-12
Method:X-RAY DIFFRACTION (2.878 Å)
Cite:ARHGEF2 PanDDA analysis group deposition
To Be Published

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon