6WSX
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![BU of 6wsx by Molmil](/molmil-images/mine/6wsx) | Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J22 immobile Holliday junction | Descriptor: | DNA (5'-D(*GP*AP*GP*CP*AP*GP*AP*CP*CP*TP*GP*AP*CP*GP*CP*CP*AP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*GP*G)-3'), DNA (5'-D(P*CP*GP*TP*CP*A)-3'), ... | Authors: | Simmons, C.R, MacCulloch, T, Stephanopoulos, N, Yan, H. | Deposit date: | 2020-05-01 | Release date: | 2021-07-14 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (3.122 Å) | Cite: | The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly. Nat Commun, 13, 2022
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3Q3W
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![BU of 3q3w by Molmil](/molmil-images/mine/3q3w) | Isopropylmalate isomerase small subunit from Campylobacter jejuni. | Descriptor: | 3-isopropylmalate dehydratase small subunit | Authors: | Osipiuk, J, Gu, M, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) | Deposit date: | 2010-12-22 | Release date: | 2011-01-26 | Last modified: | 2023-12-06 | Method: | X-RAY DIFFRACTION (1.89 Å) | Cite: | Isopropylmalate isomerase small subunit from Campylobacter jejuni. To be Published
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2LA5
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![BU of 2la5 by Molmil](/molmil-images/mine/2la5) | RNA Duplex-Quadruplex Junction Complex with FMRP RGG peptide | Descriptor: | Fragile X mental retardation 1 protein, RNA (36-MER) | Authors: | Phan, A, Kuryavyi, V, Darnell, J, Serganov, A, Majumdar, A, Ilin, S, Darnell, R, Patel, D. | Deposit date: | 2011-03-03 | Release date: | 2011-06-08 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction. Nat.Struct.Mol.Biol., 18, 2011
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3OOB
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![BU of 3oob by Molmil](/molmil-images/mine/3oob) | Structural and functional insights of directly targeting Pin1 by Epigallocatechin-3-gallate | Descriptor: | (2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, ... | Authors: | Urusova, D.V, Shim, J.-H, Kim, D.-J, Jung, S.K, Zykova, T.A, Bode, A.M, Dong, Z. | Deposit date: | 2010-08-30 | Release date: | 2011-08-17 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.89 Å) | Cite: | Epigallocatechin-gallate suppresses tumorigenesis by directly targeting Pin1. Cancer Prev Res (Phila), 4, 2011
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7OA5
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![BU of 7oa5 by Molmil](/molmil-images/mine/7oa5) | RUVA COMPLEXED TO A HOLLIDAY JUNCTION. | Descriptor: | CALCIUM ION, DNA (5'-D(*AP*GP*TP*TP*CP*GP*CP*GP*AP*GP*TP*TP*CP*GP*C)-3'), DNA (5'-D(*AP*GP*TP*TP*CP*GP*CP*GP*CP*GP*CP*GP*AP*AP*CP*T)-3'), ... | Authors: | Roe, S.M, Pearl, L.H. | Deposit date: | 2021-04-19 | Release date: | 2021-04-28 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.378 Å) | Cite: | Crystal structure of an octameric RuvA-Holliday junction complex Molecular Cell, 2, 1998
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1M6G
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![BU of 1m6g by Molmil](/molmil-images/mine/1m6g) | Structural Characterisation of the Holliday Junction TCGGTACCGA | Descriptor: | 5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3', STRONTIUM ION | Authors: | Thorpe, J.H, Gale, B.C, Teixeira, S.C.M, Cardin, C.J. | Deposit date: | 2002-07-16 | Release date: | 2003-05-06 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.652 Å) | Cite: | Conformational and hydration effects of site-selective sodium, calcium and
strontium ion binding to the DNA Holliday junction structure
d(TCGGTACCGA)(4) J.Mol.Biol., 327, 2003
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1L4J
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![BU of 1l4j by Molmil](/molmil-images/mine/1l4j) | Holliday Junction TCGGTACCGA with Na and Ca Binding Sites. | Descriptor: | 5'-D(*TP*CP*GP*GP*TP*AP*CP*CP*GP*A)-3', CALCIUM ION, SODIUM ION | Authors: | Thorpe, J.H, Gale, B.C, Teixeira, S.C.M, Cardin, C.J. | Deposit date: | 2002-03-05 | Release date: | 2003-03-04 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Conformational and Hydration Effects of Site-selective Sodium, Calcium and
Strontium Ion Binding to the DNA Holliday Junction Structure
d(TCGGTACCGA)4 J.Mol.Biol., 327, 2003
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1KBU
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![BU of 1kbu by Molmil](/molmil-images/mine/1kbu) | CRE RECOMBINASE BOUND TO A LOXP HOLLIDAY JUNCTION | Descriptor: | CRE RECOMBINASE, LOXP | Authors: | Martin, S.S, Pulido, E, Chu, V.C, Lechner, T, Baldwin, E.P. | Deposit date: | 2001-11-06 | Release date: | 2002-06-07 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | The Order of Strand Exchanges in Cre-LoxP Recombination and its Basis Suggested by the Crystal Structure of a
Cre-LoxP Holliday Junction Complex J.Mol.Biol., 319, 2002
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196D
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![BU of 196d by Molmil](/molmil-images/mine/196d) | |
1EKW
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![BU of 1ekw by Molmil](/molmil-images/mine/1ekw) | NMR STRUCTURE OF A DNA THREE-WAY JUNCTION | Descriptor: | DNA (5'-D(*CP*GP*GP*TP*GP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*CP*AP*CP*CP*G)-3'), DNA (5'-D(*GP*GP*AP*CP*GP*TP*CP*GP*CP*AP*GP*C)-3') | Authors: | Thiviyanathan, V, Luxon, B.A, Leontis, N.B, Donne, D, Gorenstein, D.G. | Deposit date: | 2000-03-09 | Release date: | 2000-03-20 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Hybrid-hybrid matrix structural refinement of a DNA three-way junction from 3D NOESY-NOESY. J.Biomol.NMR, 14, 1999
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1EGK
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![BU of 1egk by Molmil](/molmil-images/mine/1egk) | CRYSTAL STRUCTURE OF A NUCLEIC ACID FOUR-WAY JUNCTION | Descriptor: | 10-23 DNA ENZYME, MAGNESIUM ION, RNA (5'-R(*AP*GP*GP*AP*GP*AP*GP*AP*GP*AP*UP*GP*GP*GP*UP*GP*CP*GP*AP*G)-3') | Authors: | Nowakowski, J, Shim, P.J, Stout, C.D, Joyce, G.F. | Deposit date: | 2000-02-15 | Release date: | 2000-06-26 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Alternative conformations of a nucleic acid four-way junction. J.Mol.Biol., 300, 2000
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1IN7
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![BU of 1in7 by Molmil](/molmil-images/mine/1in7) | THERMOTOGA MARITIMA RUVB R170A | Descriptor: | ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB | Authors: | Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A. | Deposit date: | 2001-05-12 | Release date: | 2001-08-08 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure and mechanism of the RuvB Holliday junction branch migration motor. J.Mol.Biol., 311, 2001
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1IN6
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![BU of 1in6 by Molmil](/molmil-images/mine/1in6) | THERMOTOGA MARITIMA RUVB K64R MUTANT | Descriptor: | ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, COBALT (II) ION, ... | Authors: | Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A. | Deposit date: | 2001-05-12 | Release date: | 2001-08-08 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structure and mechanism of the RuvB Holliday junction branch migration motor. J.Mol.Biol., 311, 2001
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1IN5
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![BU of 1in5 by Molmil](/molmil-images/mine/1in5) | THERMOGOTA MARITIMA RUVB A156S MUTANT | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB | Authors: | Putnam, C.D, Clancy, S.B, Tsuruta, H, Gonzalez, S, Wetmur, J.G, Tainer, J.A. | Deposit date: | 2001-05-12 | Release date: | 2001-08-08 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structure and mechanism of the RuvB Holliday junction branch migration motor. J.Mol.Biol., 311, 2001
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1KCF
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![BU of 1kcf by Molmil](/molmil-images/mine/1kcf) | Crystal Structure of the Yeast Mitochondrial Holliday Junction Resolvase, Ydc2 | Descriptor: | HYPOTHETICAL 30.2 KD PROTEIN C25G10.02 IN CHROMOSOME I, SULFATE ION | Authors: | Ceschini, S, Keeley, A, McAlister, M.S.B, Oram, M, Phelan, J, Pearl, L.H, Tsaneva, I.R, Barrett, T.E. | Deposit date: | 2001-11-08 | Release date: | 2001-11-28 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structure of the fission yeast mitochondrial Holliday junction resolvase Ydc2. EMBO J., 20, 2001
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1J7K
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![BU of 1j7k by Molmil](/molmil-images/mine/1j7k) | THERMOTOGA MARITIMA RUVB P216G MUTANT | Descriptor: | ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, COBALT (II) ION, ... | Authors: | Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A. | Deposit date: | 2001-05-16 | Release date: | 2001-08-08 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structure and mechanism of the RuvB Holliday junction branch migration motor. J.Mol.Biol., 311, 2001
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1IN8
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![BU of 1in8 by Molmil](/molmil-images/mine/1in8) | THERMOTOGA MARITIMA RUVB T158V | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB | Authors: | Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A. | Deposit date: | 2001-05-12 | Release date: | 2001-08-08 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure and mechanism of the RuvB Holliday junction branch migration motor. J.Mol.Biol., 311, 2001
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6VE7
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![BU of 6ve7 by Molmil](/molmil-images/mine/6ve7) | The inner junction complex of Chlamydomonas reinhardtii doublet microtubule | Descriptor: | Cilia- and flagella-associated protein 20, FAP276, FAP52, ... | Authors: | Khalifa, A.A.Z, Ichikawa, M, Bui, K.H. | Deposit date: | 2019-12-30 | Release date: | 2020-02-05 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | The inner junction complex of the cilia is an interaction hub that involves tubulin post-translational modifications. Elife, 9, 2020
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2N3R
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![BU of 2n3r by Molmil](/molmil-images/mine/2n3r) | NMR structure of the II-III-VI three-way junction from the VS ribozyme and identification of magnesium-binding sites using paramagnetic relaxation enhancement | Descriptor: | MAGNESIUM ION, RNA (62-MER) | Authors: | Bonneau, E, Girard, N, Lemieux, S, Legault, P. | Deposit date: | 2015-06-09 | Release date: | 2015-07-15 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | The NMR structure of the II-III-VI three-way junction from the Neurospora VS ribozyme reveals a critical tertiary interaction and provides new insights into the global ribozyme structure. Rna, 21, 2015
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2N3Q
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![BU of 2n3q by Molmil](/molmil-images/mine/2n3q) | |
2H8E
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![BU of 2h8e by Molmil](/molmil-images/mine/2h8e) | Structure RusA D70N | Descriptor: | Crossover junction endodeoxyribonuclease rusA | Authors: | Macmaster, R.A. | Deposit date: | 2006-06-07 | Release date: | 2007-04-24 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | RusA Holliday junction resolvase: DNA complex structure--insights into selectivity and specificity. Nucleic Acids Res., 34, 2006
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2H8C
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![BU of 2h8c by Molmil](/molmil-images/mine/2h8c) | Structure of RusA D70N in complex with DNA | Descriptor: | 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*T)-3', Crossover junction endodeoxyribonuclease rusA | Authors: | Macmaster, R.A. | Deposit date: | 2006-06-07 | Release date: | 2007-04-24 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | RusA Holliday junction resolvase: DNA complex structure--insights into selectivity and specificity. Nucleic Acids Res., 34, 2006
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6LW3
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![BU of 6lw3 by Molmil](/molmil-images/mine/6lw3) | Crystal structure of RuvC from Pseudomonas aeruginosa | Descriptor: | Crossover junction endodeoxyribonuclease RuvC | Authors: | Hu, Y, He, Y, Lin, Z. | Deposit date: | 2020-02-07 | Release date: | 2020-02-26 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.38 Å) | Cite: | Biochemical and structural characterization of the Holliday junction resolvase RuvC from Pseudomonas aeruginosa. Biochem.Biophys.Res.Commun., 525, 2020
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6M4T
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![BU of 6m4t by Molmil](/molmil-images/mine/6m4t) | U shaped head to head four-way junction in d(TTCTGCTGCTGAA) sequence | Descriptor: | COBALT (II) ION, DNA (5'-D(P*(UD)P*TP*CP*TP*GP*CP*TP*GP*CP*TP*GP*AP*A)-3'), N4-[4-[(6-chloranyl-2-methoxy-acridin-9-yl)amino]butyl]-1,3,5-triazine-2,4,6-triamine | Authors: | Hou, M.H, Chien, C.M, Satange, R.B, Wu, P.C. | Deposit date: | 2020-03-09 | Release date: | 2020-07-15 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Structural Basis for Targeting T:T Mismatch with Triaminotriazine-Acridine Conjugate Induces a U-Shaped Head-to-Head Four-Way Junction in CTG Repeat DNA. J.Am.Chem.Soc., 142, 2020
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6M5J
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![BU of 6m5j by Molmil](/molmil-images/mine/6m5j) | U shaped head to head four-way junction in d(TTCTGCTGCTGAA/TTCTGCAGCTGAA) sequence | Descriptor: | COBALT (II) ION, DNA (5'-D(P*TP*TP*CP*TP*GP*CP*AP*GP*CP*TP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*TP*GP*CP*TP*GP*CP*TP*GP*AP*A)-3'), ... | Authors: | Hou, M.H, Chien, C.M, Satange, R.B. | Deposit date: | 2020-03-11 | Release date: | 2020-07-15 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structural Basis for Targeting T:T Mismatch with Triaminotriazine-Acridine Conjugate Induces a U-Shaped Head-to-Head Four-Way Junction in CTG Repeat DNA. J.Am.Chem.Soc., 142, 2020
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