Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1OD7
DownloadVisualize
BU of 1od7 by Molmil
N-terminal of Sialoadhesin in complex with Me-a-9-N-(naphthyl-2-carbonyl)-amino-9-deoxy-Neu5Ac (NAP compound)
Descriptor: ME-A-9-N-(NAPHTHYL-2-CARBONYL)-AMINO-9-DEOXY-NEU5AC, SIALOADHESIN
Authors:Zaccai, N.R, Maenaka, K, Maenaka, T, Crocker, P.R, Brossmer, R, Kelm, S, Jones, E.Y.
Deposit date:2003-02-14
Release date:2003-05-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-Guided Design of Sialic Acid-Based Siglec Inhibitors and Crystallographic Analysis in Complex with Sialoadhesin
Structure, 11, 2003
1OHQ
DownloadVisualize
BU of 1ohq by Molmil
Crystal structure of HEL4, a soluble human VH antibody domain resistant to aggregation
Descriptor: IMMUNOGLOBULIN
Authors:Jespers, L, Schon, O, James, L.C, Veprintsev, D, Winter, G.
Deposit date:2003-05-30
Release date:2004-03-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Hel4, a Soluble, Refoldable Human V(H) Single Domain with a Germ-Line Scaffold
J.Mol.Biol., 337, 2004
1P4B
DownloadVisualize
BU of 1p4b by Molmil
Three-Dimensional Structure Of a Single Chain Fv Fragment Complexed With The peptide GCN4(7P-14P).
Descriptor: Antibody Variable heavy chain, Antibody Variable light chain, GCN4(7P-14P) peptide
Authors:Zahnd, C, Spinelli, S, Luginbuhl, B, Jermutus, L, Amstutz, P, Cambillau, C, Pluckthun, A.
Deposit date:2003-04-22
Release date:2004-05-04
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Directed in Vitro Evolution and Crystallographic Analysis of a Peptide-binding Single Chain Antibody Fragment (scFv) with Low Picomolar Affinity.
J.Biol.Chem., 279, 2004
1P4I
DownloadVisualize
BU of 1p4i by Molmil
Crystal Structure of scFv against peptide GCN4
Descriptor: ANTIBODY VARIABLE LIGHT CHAIN, antibody variable heavy chain
Authors:Zahnd, C, Spinelli, S, Luginbuhl, B, Jermutus, L, Amstutz, P, Cambillau, C, Pluckthun, A.
Deposit date:2003-04-23
Release date:2004-05-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Directed in Vitro Evolution and Crystallographic Analysis of a Peptide-binding Single Chain Antibody Fragment (scFv) with Low Picomolar Affinity.
J.Biol.Chem., 279, 2004
1MQK
DownloadVisualize
BU of 1mqk by Molmil
Crystal structure of the unliganded Fv-fragment of the anti-cytochrome C oxidase antibody 7E2
Descriptor: antibody 7E2 FV fragment, heavy chain, light chain
Authors:Essen, L.-O, Harrenga, A, Ostermeier, C, Michel, H.
Deposit date:2002-09-16
Release date:2003-04-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:1.3 A X-ray structure of an antibody Fv fragment used for induced membrane-protein crystallization.
Acta Crystallogr.,Sect.D, 59, 2003
1MCP
DownloadVisualize
BU of 1mcp by Molmil
PHOSPHOCHOLINE BINDING IMMUNOGLOBULIN FAB MC/PC603. AN X-RAY DIFFRACTION STUDY AT 2.7 ANGSTROMS
Descriptor: IGA-KAPPA MCPC603 FAB (HEAVY CHAIN), IGA-KAPPA MCPC603 FAB (LIGHT CHAIN), SULFATE ION
Authors:Satow, Y, Cohen, G.H, Padlan, E.A, Davies, D.R.
Deposit date:1984-07-09
Release date:1985-01-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Phosphocholine binding immunoglobulin Fab McPC603. An X-ray diffraction study at 2.7 A.
J.Mol.Biol., 190, 1986
1LVE
DownloadVisualize
BU of 1lve by Molmil
STRUCTURE OF THE VARIABLE DOMAIN OF HUMAN IMMUNOGLOBULIN K-4 LIGHT CHAIN LEN
Descriptor: LEN, A VARIABLE DOMAIN FROM KAPPA-4 TYPE
Authors:Schiffer, M, Huang, D.-B, Chang, C.-H.
Deposit date:1996-07-17
Release date:1998-01-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Variable domain structure of kappaIV human light chain Len: high homology to the murine light chain McPC603.
Mol.Immunol., 34, 1997
1MAJ
DownloadVisualize
BU of 1maj by Molmil
SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN
Descriptor: IGG2A-KAPPA 26-10 FV (LIGHT CHAIN)
Authors:Constantine, K.L, Friedrichs, M.S, Metzler, W.J, Wittekind, M, Hensley, P, Mueller, L.
Deposit date:1993-09-16
Release date:1994-01-31
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Solution structure of an isolated antibody VL domain.
J.Mol.Biol., 236, 1994
1MCW
DownloadVisualize
BU of 1mcw by Molmil
THREE-DIMENSIONAL STRUCTURE OF A HYBRID LIGHT CHAIN DIMER. PROTEIN ENGINEERING OF A BINDING CAVITY
Descriptor: IMMUNOGLOBULIN MCG (LIGHT CHAIN), IMMUNOGLOBULIN WEIR (LIGHT CHAIN)
Authors:Ely, K.R, Herron, J.N, Edmundson, A.B.
Deposit date:1989-05-09
Release date:1990-10-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Three-dimensional structure of a hybrid light chain dimer: protein engineering of a binding cavity.
Mol.Immunol., 27, 1990
1MOE
DownloadVisualize
BU of 1moe by Molmil
The three-dimensional structure of an engineered scFv T84.66 dimer or diabody in VL to VH linkage.
Descriptor: SULFATE ION, anti-CEA mAb T84.66
Authors:Carmichael, J.A, Power, B.E, Garrett, T.P.J, Yazaki, P.J, Shively, J.E, Raubischek, A.A, Wu, A.M, Hudson, P.J.
Deposit date:2002-09-09
Release date:2003-03-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Crystal Structure of an Anti-CEA scFv Diabody Assembled from T84.66 scFvs in VL-to-VH Orientation: Implications for Diabody Flexibility
J.Mol.Biol., 326, 2003
1OAY
DownloadVisualize
BU of 1oay by Molmil
Antibody multispecificity mediated by conformational diversity
Descriptor: Furazolidone, IMMUNOGLOBULIN E
Authors:James, L.C, Roversi, P, Tawfik, D.
Deposit date:2003-01-21
Release date:2004-01-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Antibody Multispecificity Mediated by Conformational Diversity
Science, 299, 2003
1OAU
DownloadVisualize
BU of 1oau by Molmil
Fv Structure of the IgE SPE-7 in complex with DNP-Ser (immunising hapten)
Descriptor: 2,4-DINITROPHENOL, IMIDAZOLE, IMMUNOGLOBULIN E, ...
Authors:James, L.C, Roversi, P, Tawfik, D.
Deposit date:2003-01-21
Release date:2004-01-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Antibody Multispecificity Mediated by Conformational Diversity
Science, 299, 2003
1OAQ
DownloadVisualize
BU of 1oaq by Molmil
Free conformation Ab1 of the IgE SPE-7
Descriptor: HEAVY CHAIN, LIGHT CHAIN
Authors:James, L.C, Roversi, P, Tawfik, D.
Deposit date:2003-01-21
Release date:2004-01-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Antibody Multispecificity Mediated by Conformational Diversity
Science, 299, 2003
1OAR
DownloadVisualize
BU of 1oar by Molmil
Fv IgE SPE-7 in complex with Alizarin Red
Descriptor: 1,2-ETHANEDIOL, ALIZARIN RED, CACODYLATE ION, ...
Authors:James, L.C, Roversi, P, Tawfik, D.
Deposit date:2003-01-21
Release date:2004-01-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Antibody Multispecificity Mediated by Conformational Diversity
Science, 299, 2003
6EFZ
DownloadVisualize
BU of 6efz by Molmil
Crystal Structure of DIP-Theta Ig1-3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Cosmanescu, F, Shapiro, L.
Deposit date:2018-08-17
Release date:2018-11-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.499 Å)
Cite:Neuron-Subtype-Specific Expression, Interaction Affinities, and Specificity Determinants of DIP/Dpr Cell Recognition Proteins.
Neuron, 100, 2018
3SBW
DownloadVisualize
BU of 3sbw by Molmil
Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and human PD-L1
Descriptor: Programmed cell death 1 ligand 1, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Cao, E, Nathenson, S.G, Almo, S.C.
Deposit date:2011-06-06
Release date:2011-07-13
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and human PD-L1
To be published
7RBU
DownloadVisualize
BU of 7rbu by Molmil
SARS-CoV-2 Spike in complex with PVI.V6-14 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PVI.V6-14 Fab heavy chain, ...
Authors:Altomare, C.G, Bajic, G.
Deposit date:2021-07-06
Release date:2022-05-04
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of a Vaccine-Induced, Germline-Encoded Human Antibody Defines a Neutralizing Epitope on the SARS-CoV-2 Spike N-Terminal Domain.
Mbio, 13, 2022
3J6N
DownloadVisualize
BU of 3j6n by Molmil
Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
Descriptor: Coxsackie and adenovirus receptor
Authors:Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
Deposit date:2014-03-19
Release date:2014-04-09
Last modified:2024-11-27
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
8AOM
DownloadVisualize
BU of 8aom by Molmil
Complex of PD-L1 with VHH1
Descriptor: MAGNESIUM ION, Programmed cell death 1 ligand 1, VHH6
Authors:Kang-Pettinger, T, Hall, G.
Deposit date:2022-08-08
Release date:2023-06-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Identification, binding, and structural characterization of single domain anti-PD-L1 antibodies inhibitory of immune regulatory proteins PD-1 and CD80.
J.Biol.Chem., 299, 2023
3JZ7
DownloadVisualize
BU of 3jz7 by Molmil
Crystal structure of the extracellular domains of coxsackie & adenovirus receptor from mouse (mCAR)
Descriptor: Coxsackievirus and adenovirus receptor homolog, ISOPROPYL ALCOHOL
Authors:Max, K.E.A, Heinemann, U.
Deposit date:2009-09-23
Release date:2010-03-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The coxsackievirus-adenovirus receptor reveals complex homophilic and heterophilic interactions on neural cells.
J.Neurosci., 30, 2010
8BPE
DownloadVisualize
BU of 8bpe by Molmil
8:1 binding of FcMR on IgM pentameric core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fas apoptotic inhibitory molecule 3, ...
Authors:Chen, Q, Rosenthal, P, Tolar, P.
Deposit date:2022-11-16
Release date:2023-04-12
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Structural basis for Fc receptor recognition of immunoglobulin M.
Nat.Struct.Mol.Biol., 30, 2023
5XPW
DownloadVisualize
BU of 5xpw by Molmil
Structure of amphioxus IgVJ-C2 molecule
Descriptor: amphioxus IgVJ-C2
Authors:Chen, R, Qi, J, Zhang, N, Zhang, L, Yao, S, Wu, Y, Jiang, B, Wang, Z, Yuan, H, Zhang, Q, Xia, C.
Deposit date:2017-06-05
Release date:2018-04-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Discovery and Analysis of Invertebrate IgVJ-C2 Structure from Amphioxus Provides Insight into the Evolution of the Ig Superfamily.
J. Immunol., 200, 2018
6FR4
DownloadVisualize
BU of 6fr4 by Molmil
003 TCR Study of CDR Loop Flexibility
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-15
Release date:2018-04-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
6GBH
DownloadVisualize
BU of 6gbh by Molmil
Helicobacter pylori adhesin HopQ type II bound to the N-terminal domain of human CEACAM1
Descriptor: Carcinoembryonic antigen-related cell adhesion molecule 1, HopQ, SULFATE ION
Authors:Moonens, K, Kruse, T, Gerhard, M, Remaut, H.
Deposit date:2018-04-13
Release date:2018-06-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Helicobacter pyloriadhesin HopQ disruptstransdimerization in human CEACAMs.
EMBO J., 37, 2018
6GBG
DownloadVisualize
BU of 6gbg by Molmil
Helicobacter pylori adhesin HopQ type I bound to the N-terminal domain of human CEACAM1
Descriptor: BROMIDE ION, Carcinoembryonic antigen-related cell adhesion molecule 1, Outer membrane protein
Authors:Moonens, K, Kruse, T, Gerhard, M, Remaut, H.
Deposit date:2018-04-13
Release date:2018-06-27
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Helicobacter pyloriadhesin HopQ disruptstransdimerization in human CEACAMs.
EMBO J., 37, 2018

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon