PDB: 40 resultsInfo pagesStatus searchChemie searchBIRD

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7EGC	p53-bound TFIID-based holo PIC on HDM2 promoter Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... Authors: Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y. Deposit date: 2021-03-24 Release date: 2021-05-12 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural insights into preinitiation complex assembly on core promoters. Science, 372, 2021
7EG8	TFIID-based core PIC on PUMA promoter Descriptor: DNA (85-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ... Authors: Chen, X, Qi, Y, Hou, H, Wang, X, Wu, Z, Li, J, Xu, Y. Deposit date: 2021-03-24 Release date: 2021-05-05 Last modified: 2021-05-19 Method: ELECTRON MICROSCOPY (7.4 Å) Cite: Structural insights into preinitiation complex assembly on core promoters. Science, 372, 2021
7ENA	TFIID-based PIC-Mediator holo-complex in pre-assembled state (pre-hPIC-MED) Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... Authors: Chen, X, Qi, Y, Wang, X, Wu, Z, Yin, X, Li, J, Liu, W, Xu, Y. Deposit date: 2021-04-16 Release date: 2021-05-26 Last modified: 2021-06-16 Method: ELECTRON MICROSCOPY (4.07 Å) Cite: Structures of the human Mediator and Mediator-bound preinitiation complex. Science, 372, 2021
7ENC	TFIID-based PIC-Mediator holo-complex in fully-assembled state (hPIC-MED) Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... Authors: Chen, X, Qi, Y, Wang, X, Wu, Z, Yin, X, Li, J, Liu, W, Xu, Y. Deposit date: 2021-04-16 Release date: 2021-05-26 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (4.13 Å) Cite: Structures of the human Mediator and Mediator-bound preinitiation complex. Science, 372, 2021
5ODD	HUMAN MED26 N-TERMINAL DOMAIN (1-92) Descriptor: Mediator of RNA polymerase II transcription subunit 26 Authors: Lens, Z, Cantrelle, F.-X, Perruzini, R, Dewitte, F, Hanoulle, X, Villeret, V, Verger, A, Landrieu, I. Deposit date: 2017-07-05 Release date: 2017-11-29 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: 1H, 15N and 13C assignments of the N-terminal domain of the Mediator complex subunit MED26. Biomol.Nmr Assign., 10, 2016
1DPN	B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3'), MAGNESIUM ION Authors: Egli, M, Tereshko, V, Teplova, M, Minasov, G, Joachimiak, A, Sanishvili, R, Weeks, C.M, Miller, R, Maier, M.A, An, H, Dan Cook, P, Manoharan, M. Deposit date: 1999-12-27 Release date: 2000-04-04 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (0.95 Å) Cite: X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution. Biopolymers, 48, 1998
388D	CRYSTAL STRUCTURE OF B-DNA WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINES: IMPLICATIONS OF CONFORMATIONAL PREORGANIZATION FOR DUPLEX STABILITY Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*(TAF)P*CP*GP*CP*G)-3'), MAGNESIUM ION Authors: Berger, I, Tereshko, V, Ikeda, H, Marquez, V.E, Egli, M. Deposit date: 1998-04-20 Release date: 1998-05-05 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structures of B-DNA with incorporated 2'-deoxy-2'-fluoro-arabino-furanosyl thymines: implications of conformational preorganization for duplex stability. Nucleic Acids Res., 26, 1998
389D	CRYSTAL STRUCTURE OF B-DNA WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINES: IMPLICATIONS OF CONFORMATIONAL PREORGANIZATION FOR DUPLEX STABILITY Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3'), MAGNESIUM ION Authors: Berger, I, Tereshko, V, Ikeda, H, Marquez, V.E, Egli, M. Deposit date: 1998-04-20 Release date: 1998-05-05 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structures of B-DNA with incorporated 2'-deoxy-2'-fluoro-arabino-furanosyl thymines: implications of conformational preorganization for duplex stability. Nucleic Acids Res., 26, 1998
436D	THE DICKERSON-DREW B-DNA DODECAMER REVISITED-AT ATOMIC RESOLUTION Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3', MAGNESIUM ION Authors: Tereshko, V, Minasov, G, Egli, M. Deposit date: 1998-11-12 Release date: 1998-11-25 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.1 Å) Cite: The Dickerson-Drew B-DNA Dodecamer Revisited-At Atomic Resolution J.Am.Chem.Soc., 121, 1999
461D	A "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVE Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, RUBIDIUM ION Authors: Tereshko, V, Minasov, G, Egli, M. Deposit date: 1999-03-12 Release date: 1999-04-08 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.5 Å) Cite: A "Hydrat-Ion Spine" in a B-DNA minor groove J.Am.Chem.Soc., 121, 1999
478D	CRYSTAL STRUCTURE OF THE B-DNA DODECAMER 5'-D(CGCGAA(TAF)TCGCG), WHERE TAF IS 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3', CALCIUM ION Authors: Minasov, G, Tereshko, V, Egli, M. Deposit date: 1999-06-26 Release date: 1999-07-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Atomic-resolution crystal structures of B-DNA reveal specific influences of divalent metal ions on conformation and packing. J.Mol.Biol., 291, 1999
460D	A "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVE Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, RUBIDIUM ION Authors: Tereshko, V, Minasov, G, Egli, M. Deposit date: 1999-03-12 Release date: 1999-04-08 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.2 Å) Cite: A "Hydrat-Ion Spine" in a B-DNA minor groove J.Am.Chem.Soc., 121, 1999
2F69	Ternary complex of SET7/9 bound to AdoHcy and a TAF10 peptide Descriptor: Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7, S-ADENOSYL-L-HOMOCYSTEINE, ... Authors: Couture, J.-F, Collazo, E, Hauk, G, Trievel, R.C. Deposit date: 2005-11-28 Release date: 2006-01-17 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structural basis for the methylation site specificity of SET7/9 Nat.Struct.Mol.Biol., 13, 2006
1FXH	MUTANT OF PENICILLIN ACYLASE IMPAIRED IN CATALYSIS WITH PHENYLACETIC ACID IN THE ACTIVE SITE Descriptor: 2-PHENYLACETIC ACID, CALCIUM ION, PENICILLIN ACYLASE Authors: Alkema, W.B, Hensgens, C.M, Kroezinga, E.H, de Vries, E, Floris, R, van der Laan, J.M, Dijkstra, B.W, Janssen, D.B. Deposit date: 2000-09-26 Release date: 2001-03-28 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.97 Å) Cite: Characterization of the beta-lactam binding site of penicillin acylase of Escherichia coli by structural and site-directed mutagenesis studies. Protein Eng., 13, 2000
1FXV	PENICILLIN ACYLASE MUTANT IMPAIRED IN CATALYSIS WITH PENICILLIN G IN THE ACTIVE SITE Descriptor: CALCIUM ION, PENICILLIN ACYLASE, PENICILLIN G Authors: Alkema, W.B, Hensgens, C.M, Kroezinga, E.H, de Vries, E, Floris, R, van der Laan, J.M, Dijkstra, B.W, Janssen, D.B. Deposit date: 2000-09-27 Release date: 2001-03-28 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Characterization of the beta-lactam binding site of penicillin acylase of Escherichia coli by structural and site-directed mutagenesis studies. Protein Eng., 13, 2000

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