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6DPC
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BU of 6dpc by Molmil
Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 12 mM Mn2+ and 200 mM K+ for 40 s at 21 C
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), GLYCEROL, ...
Authors:Samara, N.L, Yang, W.
Deposit date:2018-06-09
Release date:2018-08-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol., 25, 2018
4OWL
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BU of 4owl by Molmil
Crystal Structure of the Vibrio vulnificus Hemolysin/Cytolysin Beta-Trefoil Lectin with N-Acetyl-D-Lactosamine Bound
Descriptor: Cytolysin, GLYCEROL, beta-D-galactopyranose, ...
Authors:Kaus, K, Olson, R.
Deposit date:2014-02-02
Release date:2014-05-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Glycan Specificity of the Vibrio vulnificus Hemolysin Lectin Outlines Evolutionary History of Membrane Targeting by a Toxin Family.
J.Mol.Biol., 426, 2014
6DDM
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BU of 6ddm by Molmil
Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody
Descriptor: Anti-MICA Fab fragment heavy chain clone 1D5, Anti-MICA Fab fragment light chain clone 1D5, MHC class I polypeptide-related sequence A
Authors:Matsumoto, M.L.
Deposit date:2018-05-10
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-resolution glycosylation site-engineering method identifies MICA epitope critical for shedding inhibition activity of anti-MICA antibodies.
MAbs, 11, 2019
6DDV
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BU of 6ddv by Molmil
Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody
Descriptor: Anti-MICA Fab fragment heavy chain clone 6E1, Anti-MICA Fab fragment light chain clone 6E1, MHC class I chain-related protein A
Authors:Matsumoto, M.L.
Deposit date:2018-05-10
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:High-resolution glycosylation site-engineering method identifies MICA epitope critical for shedding inhibition activity of anti-MICA antibodies.
MAbs, 11, 2019
2G1U
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BU of 2g1u by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE TRANSPORT PROTEIN (TM1088A) FROM THERMOTOGA MARITIMA AT 1.50 A RESOLUTION
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE MONOPHOSPHATE, SODIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-02-14
Release date:2006-03-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of (tm1088a) from THERMOTOGA MARITIMA at 1.50 A resolution
To be published
4W8H
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BU of 4w8h by Molmil
Crystal structure of the TIR domain of the Toll-related Receptor TRR-2 from the lower metazoan Hydra magnipapillata (crystal form II)
Descriptor: CHLORIDE ION, Toll-receptor-related 2, hexa-His tag
Authors:Weisse, R.H.-J, Scheidig, A.J.
Deposit date:2014-08-24
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Crystal structure of the TIR domain of the Toll-related Receptor TRR-2 from the lower metazoan Hydra magnipapillata (crystal form II)
To Be Published
6DQT
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BU of 6dqt by Molmil
Crystal structure of Haemophilus influenzae OppA complex with LGG
Descriptor: ACETATE ION, LEU-GLY-GLY, Periplasmic oligopeptide-binding protein, ...
Authors:Tanaka, K.J, Pinkett, H.W.
Deposit date:2018-06-11
Release date:2018-11-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket.
J. Biol. Chem., 294, 2019
4WAL
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BU of 4wal by Molmil
Crystal structure of selenomethionine Msl5 protein in complex with RNA at 2.2 A
Descriptor: Branchpoint-bridging protein, CHLORIDE ION, GLYCEROL, ...
Authors:Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S.
Deposit date:2014-08-29
Release date:2014-12-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs.
Rna, 21, 2015
2G38
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BU of 2g38 by Molmil
A PE/PPE Protein Complex from Mycobacterium tuberculosis
Descriptor: MANGANESE (II) ION, PE FAMILY PROTEIN, PPE FAMILY PROTEIN
Authors:Strong, M, Sawaya, M.R, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2006-02-17
Release date:2006-03-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Toward the structural genomics of complexes: Crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6DS9
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BU of 6ds9 by Molmil
Elongated version of a de novo designed three helix bundle structure (GRa3D)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, THIOCYANATE ION, ...
Authors:Koebke, K.J, Ruckthong, L.R, Meagher, J.L, Stuckey, J.A, Pecoraro, V.L.
Deposit date:2018-06-13
Release date:2018-10-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Clarifying the Copper Coordination Environment in a de Novo Designed Red Copper Protein.
Inorg Chem, 57, 2018
7LP0
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BU of 7lp0 by Molmil
Crystal structure of BPTF bromodomain in complex with inhibitor Pdy-3-077
Descriptor: 1,2-ETHANEDIOL, 4-chlorol-2-methyl-5-[[(3~{R})-1-methylpiperidin-3-yl]amino]pyridazin-3-one, DIMETHYL SULFOXIDE, ...
Authors:Chan, A, Schonbrunn, E.
Deposit date:2021-02-11
Release date:2022-08-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition.
J.Med.Chem., 64, 2021
6DUN
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BU of 6dun by Molmil
Crystal Structure Analysis of PIN1
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, TRIHYDROXYARSENITE(III)
Authors:Seo, H.-S, Dhe-Paganon, S.
Deposit date:2018-06-21
Release date:2019-03-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Arsenic targets Pin1 and cooperates with retinoic acid to inhibit cancer-driving pathways and tumor-initiating cells.
Nat Commun, 9, 2018
2G6Y
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BU of 2g6y by Molmil
Crystal structure of the novel green fluorescent protein from marine copepod Pontellina plumata
Descriptor: green fluorescent protein 2
Authors:Evdokimov, A.G, Pokross, M.E, Chudakov, D.M.
Deposit date:2006-02-26
Release date:2006-03-28
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for the fast maturation of Arthropoda green fluorescent protein.
Embo Rep., 7, 2006
6QPG
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BU of 6qpg by Molmil
Influenza A virus Polymerase Heterotrimer A/nt/60/1968(H3N2) in complex with Nanobody NB8205
Descriptor: Nanobody NB8205, Polymerase acidic protein, Polymerase basic protein 2, ...
Authors:Fan, H.T, Keown, J.R, Fodor, E, Grimes, J.M.
Deposit date:2019-02-13
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Structures of influenza A virus RNA polymerase offer insight into viral genome replication.
Nature, 573, 2019
6DJW
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BU of 6djw by Molmil
Crystal Structure of pParkin (REP and RING2 deleted)-pUb-UbcH7 complex
Descriptor: RBR-type E3 ubiquitin transferase,RBR-type E3 ubiquitin transferase, Ubiquitin, Ubiquitin-conjugating enzyme E2 L3, ...
Authors:Sauve, V, Sung, G, Trempe, J.F, Gehring, K.
Deposit date:2018-05-26
Release date:2018-07-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.801 Å)
Cite:Mechanism of parkin activation by phosphorylation.
Nat. Struct. Mol. Biol., 25, 2018
4WDI
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BU of 4wdi by Molmil
Weak TCR binding to an unstable insulin epitope drives type 1 diabetes
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2014-09-08
Release date:2015-06-24
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (2.313 Å)
Cite:Distortion of the Major Histocompatibility Complex Class I Binding Groove to Accommodate an Insulin-derived 10-Mer Peptide.
J.Biol.Chem., 290, 2015
4OZE
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BU of 4oze by Molmil
A.aolicus LpxC in complex with native product
Descriptor: CHLORIDE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ZINC ION, ...
Authors:Olivier, N.B.
Deposit date:2014-02-15
Release date:2014-08-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Mechanistic insight from the crystal structure of A.aolicus LpxC in the presence of product
To Be Published
6D6K
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BU of 6d6k by Molmil
Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii
Descriptor: Polyribonucleotide nucleotidyltransferase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-04-21
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii
to be published
4V70
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BU of 4v70 by Molmil
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Blau, C, Bock, L.V, Schroder, G.F, Davydov, I, Fischer, N, Stark, H, Rodnina, M.V, Vaiana, A.C, Grubmuller, H.
Deposit date:2013-10-14
Release date:2014-07-09
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Energy barriers and driving forces in tRNA translocation through the ribosome.
Nat.Struct.Mol.Biol., 20, 2013
6QUP
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BU of 6qup by Molmil
Structural signatures in EPR3 define a unique class of plant carbohydrate receptors
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ISOPROPYL ALCOHOL, ...
Authors:Wong, J.E, Gysel, K, Birkefeldt, T.G, Vinther, M, Muszynski, A, Azadi, P, Laursen, N.S, Sullivan, J.T, Ronson, C.W, Stougaard, J, Andersen, K.R.
Deposit date:2019-02-28
Release date:2020-08-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.871 Å)
Cite:Structural signatures in EPR3 define a unique class of plant carbohydrate receptors.
Nat Commun, 11, 2020
6DP7
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BU of 6dp7 by Molmil
Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 500 mM Mn2+ and 200 mM K+ for 40 s at 21 C
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), IODIDE ION, ...
Authors:Samara, N.L, Yang, W.
Deposit date:2018-06-09
Release date:2018-08-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.381 Å)
Cite:Cation trafficking propels RNA hydrolysis.
Nat. Struct. Mol. Biol., 25, 2018
6DC3
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BU of 6dc3 by Molmil
RSV prefusion F bound to RSD5 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab RSD5-Germline Heavy Chain, Fab RSD5-Germline Light Chain, ...
Authors:Battles, M.B, McLellan, J.S, Jones, H.J.
Deposit date:2018-05-04
Release date:2019-07-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.501 Å)
Cite:Alternative conformations of a major antigenic site on RSV F.
Plos Pathog., 15, 2019
2GIC
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BU of 2gic by Molmil
Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex
Descriptor: 45-MER, Nucleocapsid protein, URANYL (VI) ION
Authors:Green, T.J, Zhang, X, Wertz, G.W, Luo, M.
Deposit date:2006-03-28
Release date:2006-08-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Structure of the vesicular stomatitis virus nucleoprotein-RNA complex unveils how the RNA is sequestered
Science, 313, 2006
7LER
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BU of 7ler by Molmil
Netrin-1 filament assembly
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Netrin-1, ...
Authors:McDougall, M, Gupta, M, Stetefeld, J.
Deposit date:2021-01-14
Release date:2022-02-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (5.99 Å)
Cite:The dynamic nature of netrin-1 and the structural basis for glycosaminoglycan fragment-induced filament formation.
Nat Commun, 14, 2023
5KO0
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BU of 5ko0 by Molmil
Human Islet Amyloid Polypeptide Segment 15-FLVHSSNNFGA-25 Determined by MicroED
Descriptor: THIOCYANATE ION, hIAPP(15-25)WT
Authors:Krotee, P.A.L, Rodriguez, J.A, Sawaya, M.R, Cascio, D, Shi, D, Nannenga, B.L, Hattne, J, Reyes, F.E, Gonen, T, Eisenberg, D.S.
Deposit date:2016-06-28
Release date:2016-12-21
Last modified:2024-03-06
Method:ELECTRON CRYSTALLOGRAPHY (1.4 Å)
Cite:Atomic structures of fibrillar segments of hIAPP suggest tightly mated beta-sheets are important for cytotoxicity.
Elife, 6, 2017

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数据于2024-07-10公开中

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