Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9F9Q
DownloadVisualize
BU of 9f9q by Molmil
Human apo pseudouridine synthase 3 (PUS3 D118A mutant)
Descriptor: tRNA pseudouridine(38/39) synthase
Authors:Lin, T.-Y, Glatt, S.
Deposit date:2024-05-08
Release date:2024-07-10
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:The molecular basis of tRNA selectivity by human pseudouridine synthase 3.
Mol.Cell, 84, 2024
9FMM
DownloadVisualize
BU of 9fmm by Molmil
Structure of human ACE2 in complex with a fluorinated small molecule inhibitor
Descriptor: (2~{S})-2-[[(2~{S})-3-[3-[(3-chloranyl-5-fluoranyl-phenyl)methyl]imidazol-4-yl]-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-4-methyl-pentanoic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Benoit, R.B, Rodrigues, M.J, Wieser, M.M.
Deposit date:2024-06-06
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Development of radiofluorinated MLN-4760 derivatives for PET imaging of the SARS-CoV-2 entry receptor ACE2
European Journal of Nuclear Medicine and Molecular Imaging, 2024
7OF3
DownloadVisualize
BU of 7of3 by Molmil
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).
Descriptor: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Hillen, H.S, Lavdovskaia, E, Nadler, F, Hanitsch, E, Linden, A, Bohnsack, K.E, Urlaub, H, Richter-Dennerlein, R.
Deposit date:2021-05-04
Release date:2021-05-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling.
Nat Commun, 12, 2021
9FS7
DownloadVisualize
BU of 9fs7 by Molmil
Coxsackievirus A16 3C protease in C2 2 21 spacegroup
Descriptor: Genome polyprotein
Authors:Fairhead, M, Lithgo, R, MacLean, M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-20
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Coxsackievirus A16 3C protease in C2 2 21 spacegroup
To Be Published
9ATF
DownloadVisualize
BU of 9atf by Molmil
Crystal structure of MERS 3CL protease in complex with a 1-methyl-4,4-difluorocyclohexyl 2-pyrrolidone inhibitor
Descriptor: (1R,2S)-2-({N-[({(2S)-1-[(4,4-difluorocyclohexyl)methyl]-5-oxopyrrolidin-2-yl}methoxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-({N-[({(2S)-1-[(4,4-difluorocyclohexyl)methyl]-5-oxopyrrolidin-2-yl}methoxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
Authors:Liu, L, Lovell, S, Battaile, K.P, Dampalla, C.S, Groutas, W.C.
Deposit date:2024-02-26
Release date:2024-07-10
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-Guided Design of Potent Coronavirus Inhibitors with a 2-Pyrrolidone Scaffold: Biochemical, Crystallographic, and Virological Studies.
J.Med.Chem., 67, 2024
9FP6
DownloadVisualize
BU of 9fp6 by Molmil
Structure of the NbNRC2 hexameric resistosome
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, NRC2a
Authors:Webster, M.W, Madhuprakash, J, Kamoun, S.
Deposit date:2024-06-13
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structure of the NbNRC2 hexameric resistosome
To Be Published
7NSX
DownloadVisualize
BU of 7nsx by Molmil
Drosophila PGRP-LB wild-type
Descriptor: Isoform A of Peptidoglycan-recognition protein LB, ZINC ION
Authors:Orlans, J, Aller, P, Da Silva, P.
Deposit date:2021-03-08
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:PGRP-LB: An Inside View into the Mechanism of the Amidase Reaction.
Int J Mol Sci, 22, 2021
9BC7
DownloadVisualize
BU of 9bc7 by Molmil
HCN1 M305L holo
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Authors:Kim, E.D, Nimigean, C.M.
Deposit date:2024-04-08
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Propofol rescues voltage-dependent gating of HCN1 channel epilepsy mutants
Nature, 2024
9IID
DownloadVisualize
BU of 9iid by Molmil
Crystal structure of PgAfp
Descriptor: Antifungal protein B
Authors:Wang, Y.
Deposit date:2024-06-20
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of PgAfp
To Be Published
7O6E
DownloadVisualize
BU of 7o6e by Molmil
2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin
Descriptor: Ferritin BfrB
Authors:Gijsbers, A, Zhang, Y, Gao, Y, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-04-10
Release date:2021-05-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Mycobacterium tuberculosis ferritin: a suitable workhorse protein for cryo-EM development.
Acta Crystallogr D Struct Biol, 77, 2021
9FYB
DownloadVisualize
BU of 9fyb by Molmil
Structural Insights into the NMN Complex of Nicotinate Nucleotide Adenylyltransferase from Enterococcus faecium via Co-Crystallization Studies
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Pandian, R, Jeje, O.A, Sayed, Y, Achilonu, I.A.
Deposit date:2024-07-03
Release date:2024-07-17
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural Insights into the NMN Complex of Nicotinate Nucleotide Adenylyltransferase from Enterococcus faecium via Co-Crystallization Studies
To be published
9C49
DownloadVisualize
BU of 9c49 by Molmil
Cryo-EM structure of Danio rerio voltage-sensing phosphatase (VSP) phosphatase domain
Descriptor: Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase TPTE2
Authors:Zhang, L, Brohawn, S.G.
Deposit date:2024-06-03
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Coupling sensor to enzyme in the voltage sensing phosphatase
To Be Published
9HVP
DownloadVisualize
BU of 9hvp by Molmil
Design, activity and 2.8 Angstroms crystal structure of a C2 symmetric inhibitor complexed to HIV-1 protease
Descriptor: HIV-1 Protease, benzyl [(1R,4S,6S,9R)-4,6-dibenzyl-5-hydroxy-1,9-bis(1-methylethyl)-2,8,11-trioxo-13-phenyl-12-oxa-3,7,10-triazatridec-1-yl]carbamate
Authors:Neidhart, D.J, Erickson, J.
Deposit date:1990-11-06
Release date:1992-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Design, activity, and 2.8 A crystal structure of a C2 symmetric inhibitor complexed to HIV-1 protease.
Science, 249, 1990
9FVO
DownloadVisualize
BU of 9fvo by Molmil
The HIV protease inhibitor amprenavir binding to the active site of Cryphonectria parasitica endothiapepsin
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, Endothiapepsin, ...
Authors:Falke, S, Senst, J.M, Guenther, S, Meents, A.
Deposit date:2024-06-27
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The HIV protease inhibitor amprenavir binding to the active site of Cryphonectria parasitica endothiapepsin
To Be Published
7OAL
DownloadVisualize
BU of 7oal by Molmil
Crystal structure of pseudokinase CASK in complex with compound 25
Descriptor: 1,2-ETHANEDIOL, 2-[[2,5-bis(bromanyl)-4-methyl-phenyl]methylamino]-4-(cyclohexylamino)-N-[3-(2-oxidanylidene-1,3-oxazolidin-3-yl)propyl]pyrimidine-5-carboxamide, Peripheral plasma membrane protein CASK
Authors:Chaikuad, A, Russ, N, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2021-04-19
Release date:2021-05-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Design and Development of a Chemical Probe for Pseudokinase Ca 2+ /calmodulin-Dependent Ser/Thr Kinase.
J.Med.Chem., 64, 2021
9F7W
DownloadVisualize
BU of 9f7w by Molmil
Humman PPARgamma ligand binding domain in complex with co-activator 1alpha peptide and bisphenol A (BPA)
Descriptor: 4,4'-PROPANE-2,2-DIYLDIPHENOL, Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Authors:Useini, A, Strater, N.
Deposit date:2024-05-05
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Studies on the Binding Mode of Bisphenols to PPAR gamma.
Biomolecules, 14, 2024
9PCY
DownloadVisualize
BU of 9pcy by Molmil
HIGH-RESOLUTION SOLUTION STRUCTURE OF REDUCED FRENCH BEAN PLASTOCYANIN AND COMPARISON WITH THE CRYSTAL STRUCTURE OF POPLAR PLASTOCYANIN
Descriptor: COPPER (II) ION, PLASTOCYANIN
Authors:Moore, J.M, Lepre, C.A, Gippert, G.P, Chazin, W.J, Case, D.A, Wright, P.E.
Deposit date:1991-03-18
Release date:1993-10-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:High-resolution solution structure of reduced French bean plastocyanin and comparison with the crystal structure of poplar plastocyanin.
J.Mol.Biol., 221, 1991
9ICB
DownloadVisualize
BU of 9icb by Molmil
DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND COCL2
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, COBALT (II) ION, DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'), ...
Authors:Pelletier, H, Sawaya, M.R.
Deposit date:1995-12-15
Release date:1995-12-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Characterization of the metal ion binding helix-hairpin-helix motifs in human DNA polymerase beta by X-ray structural analysis.
Biochemistry, 35, 1996
9FWC
DownloadVisualize
BU of 9fwc by Molmil
Coxsackievirus B3 3C protease in C121 spacegroup
Descriptor: Genome polyprotein
Authors:Fairhead, M, Lithgo, R.M, MacLean, E.M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-28
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Coxsackievirus B3 3C protease in C121 spacegroup
To Be Published
8Y86
DownloadVisualize
BU of 8y86 by Molmil
Human AE3 with NaHCO3-
Descriptor: Anion exchange protein 3, BICARBONATE ION
Authors:Jian, L, Zhang, Q, Yao, D, Cao, Y.
Deposit date:2024-02-06
Release date:2024-07-31
Last modified:2024-08-07
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:The structural insight into the functional modulation of human anion exchanger 3.
Nat Commun, 15, 2024
7OCO
DownloadVisualize
BU of 7oco by Molmil
Hepatitis B core protein -low secretion phenotype L60V
Descriptor: Capsid protein
Authors:Bottcher, B, Makbul, C.
Deposit date:2021-04-28
Release date:2021-05-26
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype.
Microorganisms, 9, 2021
8XZO
DownloadVisualize
BU of 8xzo by Molmil
Crystal structure of folE riboswitch with Guanine
Descriptor: GUANINE, MAGNESIUM ION, RNA (53-MER), ...
Authors:Li, C.Y, Ren, A.M.
Deposit date:2024-01-21
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure-based characterization and compound identification of the wild-type THF class-II riboswitch.
Nucleic Acids Res., 2024
9FA3
DownloadVisualize
BU of 9fa3 by Molmil
Gcase in complex with small molecule inhibitor 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysosomal acid glucosylceramidase, ...
Authors:Tisi, D, Cleasby, A.
Deposit date:2024-05-10
Release date:2024-07-03
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Fragment-Based Discovery of a Series of Allosteric-Binding Site Modulators of beta-Glucocerebrosidase.
J.Med.Chem., 67, 2024
7OD8
DownloadVisualize
BU of 7od8 by Molmil
Hepatitis B core Protein mutant L60V + GSLLGRMKGA
Descriptor: Capsid protein, peptide GSLLGRMKGA
Authors:Bottcher, B, Makbul, C.
Deposit date:2021-04-28
Release date:2021-05-26
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Conformational Plasticity of Hepatitis B Core Protein Spikes Promotes Peptide Binding Independent of the Secretion Phenotype.
Microorganisms, 9, 2021
9FW2
DownloadVisualize
BU of 9fw2 by Molmil
SARS CoV-2 nsp10 in complex with the ExoN domain from nsp14
Descriptor: GLYCEROL, Guanine-N7 methyltransferase nsp14, Non-structural protein 11, ...
Authors:Fisher, S.Z.
Deposit date:2024-06-28
Release date:2024-07-10
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:SARS CoV-2 nsp10 in complex with the ExoN domain from nsp14
To Be Published

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon