Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4RF9
DownloadVisualize
BU of 4rf9 by Molmil
Crystal structure of double-domain arginine kinase from Anthopleura japonicas in complex with L-arginine and ATPgS
Descriptor: ACETATE ION, ARGININE, Arginine kinase, ...
Authors:Wang, Z, Qiao, Z, Ye, S, Zhang, R.
Deposit date:2014-09-25
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of a double-domain phosphagen kinase reveals an asymmetric arrangement of the tandem domains.
Acta Crystallogr.,Sect.D, 71, 2015
3ZEU
DownloadVisualize
BU of 3zeu by Molmil
Structure of a Salmonella typhimurium YgjD-YeaZ heterodimer bound to ATPgammaS
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Nichols, C.E, Lamb, H.K, Thompson, P, El Omari, K, Lockyer, M, Charles, I, Hawkins, A.R, Stammers, D.K.
Deposit date:2012-12-07
Release date:2013-03-20
Last modified:2017-03-29
Method:X-RAY DIFFRACTION (1.653 Å)
Cite:Crystal Structure of the Dimer of Two Essential Salmonella Typhimurium Proteins, Ygjd & Yeaz and Calorimetric Evidence for the Formation of a Ternary Ygjd-Yeaz-Yjee Complex.
Protein Sci., 22, 2013
7WX5
DownloadVisualize
BU of 7wx5 by Molmil
a Legionella acetyltransferase effector VipF
Descriptor: ACETYL COENZYME *A, N-acetyltransferase
Authors:Chen, T.T, Lin, Y.L, Zhang, S.J, Han, A.D.
Deposit date:2022-02-14
Release date:2023-02-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.392 Å)
Cite:Structural basis for the acetylation mechanism of the Legionella effector VipF.
Acta Crystallogr D Struct Biol, 78, 2022
7KW8
DownloadVisualize
BU of 7kw8 by Molmil
NMR Structure of a tRNA 2'-phosphotransferase from Runella slithyformis
Descriptor: tRNA 2'-phosphotransferase
Authors:Alphonse, S, Dantuluri, S, Banerjee, A, Shuman, S, Ghose, R.
Deposit date:2020-11-30
Release date:2021-10-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR solution structures of Runella slithyformis RNA 2'-phosphotransferase Tpt1 provide insights into NAD+ binding and specificity.
Nucleic Acids Res., 49, 2021
5K18
DownloadVisualize
BU of 5k18 by Molmil
The NatB Acetyltransferase Complex Bound To bisubstrate inhibitor
Descriptor: Bisubstrate inhibitor, COENZYME A, N-terminal acetyltransferase B complex subunit NAT3, ...
Authors:Hong, H, Cai, Y, Zhang, S, Han, A.
Deposit date:2016-05-17
Release date:2017-04-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Molecular Basis of Substrate Specific Acetylation by N-Terminal Acetyltransferase NatB
Structure, 25, 2017
6W2L
DownloadVisualize
BU of 6w2l by Molmil
Crystal structure of human dehydrodolichyl diphosphate synthase (NgBR/DHDDS) in complex with Mg and IPP
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Dehydrodolichyl diphosphate synthase complex subunit DHDDS, Dehydrodolichyl diphosphate synthase complex subunit NUS1, ...
Authors:Edani, B.H, Ha, Y, Sessa, W.C.
Deposit date:2020-03-06
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.306 Å)
Cite:Structural elucidation of thecis-prenyltransferase NgBR/DHDDS complex reveals insights in regulation of protein glycosylation.
Proc.Natl.Acad.Sci.USA, 117, 2020
1NKZ
DownloadVisualize
BU of 1nkz by Molmil
Crystal structure of LH2 B800-850 from Rps. acidophila at 2.0 Angstrom resolution
Descriptor: BACTERIOCHLOROPHYLL A, BENZAMIDINE, Light-harvesting protein B-800/850, ...
Authors:Papiz, M.Z, Prince, S.M, Howard, T, Cogdell, R.J, Isaacs, N.W.
Deposit date:2003-01-06
Release date:2003-02-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure and thermal motion of the B800-850 LH2 complex from Rps. acidophila at 2.0 A resolution and 100K : new structural features and functionally relevant motions.
J.Mol.Biol., 326, 2003
5KCY
DownloadVisualize
BU of 5kcy by Molmil
Crystal structure of the aromatic prenyltransferase AtaPT from Aspergillus terreus A8-4 in complex with geranyl S-thiolodiphosphate and (+)-butyrolactone II
Descriptor: GERANYL S-THIOLODIPHOSPHATE, aromatic prenyltransferase, methyl (2~{R})-3-(4-hydroxyphenyl)-2-[(4-hydroxyphenyl)methyl]-4-oxidanyl-5-oxidanylidene-furan-2-carboxylate
Authors:Sun, F, Gao, B.
Deposit date:2016-06-07
Release date:2016-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular insights into the enzyme promiscuity of an aromatic prenyltransferase.
Nat. Chem. Biol., 13, 2017
3WXZ
DownloadVisualize
BU of 3wxz by Molmil
The structure of the I375F mutant of CsyB
Descriptor: Putative uncharacterized protein csyB
Authors:Mori, T, Yang, D, Matsui, T, Morita, H, Fujii, I, Abe, I.
Deposit date:2014-08-13
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Structural basis for the formation of acylalkylpyrones from two beta-ketoacyl units by the fungal type III polyketide synthase CsyB.
J.Biol.Chem., 290, 2015
7WVZ
DownloadVisualize
BU of 7wvz by Molmil
CalA3_modular PKS_KS-AT-DH-KR
Descriptor: Beta-ketoacyl-acyl-carrier-protein synthase I
Authors:Wang, J, Wang, Z.
Deposit date:2022-02-12
Release date:2023-02-22
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:C-N bond formation by a polyketide synthase.
Nat Commun, 14, 2023
2VU2
DownloadVisualize
BU of 2vu2 by Molmil
Biosynthetic thiolase from Z. ramigera. Complex with S-pantetheine-11- pivalate.
Descriptor: (3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-({3-oxo-3-[(2-sulfanylethyl)amino]propyl}amino)butyl 2,2-dimethylpropanoate, ACETYL-COA ACETYLTRANSFERASE, SULFATE ION
Authors:Kursula, P, Merilainen, G, Schmitz, W, Wierenga, R.K.
Deposit date:2008-05-19
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Sulfur Atoms of the Substrate Coa and the Catalytic Cysteine are Required for a Productive Mode of Substrate Binding in Bacterial Biosynthetic Thiolase, a Thioester-Dependent Enzyme.
FEBS J., 275, 2008
4CRY
DownloadVisualize
BU of 4cry by Molmil
Direct visualisation of strain-induced protein post-translational modification
Descriptor: ACETYL COENZYME *A, ASPARTATE 1-DECARBOXYLASE, CHLORIDE ION, ...
Authors:Monteiro, D.C.F, Patel, V, Bartlett, C.P, Grant, T.D, Nozaki, S, Gowdy, J.A, Snell, E.H, Niki, H, Pearson, A.R, Webb, M.E.
Deposit date:2014-03-02
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Direct Visualisation of Strain-Induced Protein Post-Translational Modification
To be Published
4CMV
DownloadVisualize
BU of 4cmv by Molmil
Crystal structure of Rv3378c
Descriptor: CITRIC ACID, DITERPENE SYNTHASE, MERCURY (II) ION
Authors:Layre, E, Lee, H.J, Young, D.C, Martinot, A.J, Buter, J, Minnaard, A.J, Annand, J.W, Fortune, S.M, Snider, B.B, Matsunaga, I, Rubin, E.J, Alber, T, Moody, D.B.
Deposit date:2014-01-18
Release date:2014-02-19
Last modified:2014-03-12
Method:X-RAY DIFFRACTION (2.307 Å)
Cite:Molecular Profiling of Mycobacterium Tuberculosis Identifies Tuberculosinyl Nucleoside Products of the Virulence-Associated Enzyme Rv3378C.
Proc.Natl.Acad.Sci.USA, 111, 2014
3JCU
DownloadVisualize
BU of 3jcu by Molmil
Cryo-EM structure of spinach PSII-LHCII supercomplex at 3.2 Angstrom resolution
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
Authors:Wei, X.P, Zhang, X.Z, Su, X.D, Cao, P, Liu, X.Y, Li, M, Chang, W.R, Liu, Z.F.
Deposit date:2016-03-10
Release date:2016-05-25
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of spinach photosystem II-LHCII supercomplex at 3.2 A resolution
Nature, 534, 2016
3X44
DownloadVisualize
BU of 3x44 by Molmil
Crystal structure of O-ureido-L-serine-bound K43A mutant of O-ureido-L-serine synthase
Descriptor: (E)-O-(carbamoylamino)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serine, O-ureido-L-serine synthase
Authors:Matoba, Y, Uda, N, Oda, K, Sugiyama, M.
Deposit date:2015-03-13
Release date:2015-07-29
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structural and mutational analyses of O-ureido-L-serine synthase necessary for D-cycloserine biosynthesis.
Febs J., 282, 2015
5JR5
DownloadVisualize
BU of 5jr5 by Molmil
RHCC in Complex with Elemental Sulfur
Descriptor: SULFATE ION, Tetrabrachion, octathiocane
Authors:McDougall, M, Meier, M, Stetefeld, J.
Deposit date:2016-05-05
Release date:2017-05-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Archaea S-layer nanotube from a "black smoker" in complex with cyclo-octasulfur (S8 ) rings.
Proteins, 85, 2017
4CS0
DownloadVisualize
BU of 4cs0 by Molmil
Direct visualisation of strain-induced protein post-translational modification
Descriptor: ACETYL COENZYME *A, ASPARTATE 1-DECARBOXYLASE, MAGNESIUM ION, ...
Authors:Monteiro, D.C.F, Patel, V, Bartlett, C.P, Grant, T.D, Nozaki, S, Gowdy, J.A, Snell, E.H, Niki, H, Pearson, A.R, Webb, M.E.
Deposit date:2014-03-02
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure of the Pand/Panz Protein Complex Reveals Negative Feedback Regulation of Pantothenate Biosynthesis by Coenzyme A.
Chem.Biol., 22, 2015
2WGF
DownloadVisualize
BU of 2wgf by Molmil
Crystal structure of Mycobacterium tuberculosis C171Q KasA variant
Descriptor: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
Authors:Luckner, S.R, Kisker, C.
Deposit date:2009-04-17
Release date:2009-07-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structures of Mycobacterium Tuberculosis Kasa Show Mode of Action within Cell Wall Biosynthesis and its Inhibition by Thiolactomycin
Structure, 17, 2009
5JVL
DownloadVisualize
BU of 5jvl by Molmil
C4-type pyruvate phospate dikinase: nucleotide binding domain with bound ATP analogue
Descriptor: 2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid, MAGNESIUM ION, PHOSPHOENOLPYRUVATE, ...
Authors:Minges, A, Hoeppner, A, Groth, G.
Deposit date:2016-05-11
Release date:2017-04-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase.
Sci Rep, 7, 2017
3MQD
DownloadVisualize
BU of 3mqd by Molmil
Crystal structure of beta-ketoacyl synthase from brucella melitensis with FOL 0758, (1-methyl-1h-indazol-3-yl) methanol
Descriptor: (5-thiophen-2-ylisoxazol-3-yl)methanol, Beta-ketoacyl synthase, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2010-04-28
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural characterization of beta-ketoacyl ACP synthase I bound to platencin and fragment screening molecules at two substrate binding sites.
Proteins, 88, 2020
6W7I
DownloadVisualize
BU of 6w7i by Molmil
LmFPPS mutant T164W in complex with 476A, IPP & Ca
Descriptor: 3-butyl-1-(2,2-diphosphonoethyl)pyridinium, ACETATE ION, CALCIUM ION, ...
Authors:Maheshwari, S, Kim, Y.S, Aripirala, S, Gabelli, S.B.
Deposit date:2020-03-19
Release date:2020-10-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identifying Structural Determinants of Product Specificity in Leishmania major Farnesyl Diphosphate Synthase.
Biochemistry, 59, 2020
3WYI
DownloadVisualize
BU of 3wyi by Molmil
Structure of S. aureus undecaprenyl diphosphate synthase
Descriptor: Isoprenyl transferase, MAGNESIUM ION
Authors:Gao, J, Ko, T.P, Huang, C.H, Oldfield, E, Guo, R.T.
Deposit date:2014-08-29
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Antibacterial drug leads: DNA and enzyme multitargeting.
J.Med.Chem., 58, 2015
5C88
DownloadVisualize
BU of 5c88 by Molmil
Crystal structure of Ard1 N-terminal acetyltransferase from Sulfolobus solfataricus in monoclinic form
Descriptor: COENZYME A, Uncharacterized N-acetyltransferase SSO0209
Authors:Chang, Y.Y, Hsu, C.H.
Deposit date:2015-06-25
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Multiple Conformations of the Loop Region Confers Heat-Resistance on SsArd1, a Thermophilic NatA.
Chembiochem, 17, 2016
3WYJ
DownloadVisualize
BU of 3wyj by Molmil
Structure of E. coli undecaprenyl diphosphate synthase in complex with BPH-789
Descriptor: Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific), [1-oxidanyl-2-[3-[3-[[3-[[3-[3-(2-oxidanyl-2,2-diphosphono-ethyl)phenyl]phenyl]sulfamoyl]phenyl]sulfonylamino]phenyl]phenyl]-1-phosphono-ethyl]phosphonic acid
Authors:Gao, J, Ko, T.P, Huang, C.H, Oldfield, E, Guo, R.T.
Deposit date:2014-08-29
Release date:2015-02-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Antibacterial drug leads: DNA and enzyme multitargeting.
J.Med.Chem., 58, 2015
2VTZ
DownloadVisualize
BU of 2vtz by Molmil
Biosynthetic thiolase from Z. ramigera. Complex of the C89A mutant with coenzyme A.
Descriptor: ACETYL-COA ACETYLTRANSFERASE, COENZYME A, SULFATE ION
Authors:Kursula, P, Merilainen, G, Wierenga, R.K.
Deposit date:2008-05-19
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Sulfur Atoms of the Substrate Coa and the Catalytic Cysteine are Required for a Productive Mode of Substrate Binding in Bacterial Biosynthetic Thiolase, a Thioester-Dependent Enzyme.
FEBS J., 275, 2008

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon