Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7CEU
DownloadVisualize
BU of 7ceu by Molmil
Crystal structure of L-cycloserine-bound form of cysteine desulfurase NifS from Helicobacter pylori
Descriptor: (5-hydroxy-6-methyl-4-{[(3-oxo-2,3-dihydro-1,2-oxazol-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate, Cysteine desulfurase IscS, ISOPROPYL ALCOHOL
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2020-06-24
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
1IZ2
DownloadVisualize
BU of 1iz2 by Molmil
Interactions causing the kinetic trap in serpin protein folding
Descriptor: alpha-D-glucopyranose-(1-2)-(5R)-5-[(2R)-2-hydroxynonyl]-beta-D-xylulofuranose, alpha1-antitrypsin
Authors:Im, H, Woo, M.-S, Hwang, K.Y, Yu, M.-H.
Deposit date:2002-09-19
Release date:2003-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Interactions causing the kinetic trap in serpin protein folding
J.BIOL.CHEM., 277, 2002
7ANV
DownloadVisualize
BU of 7anv by Molmil
Mutational and structural analysis of an ancestral D-type dye decolorizing peroxidase
Descriptor: GLYCEROL, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Rozeboom, H.J, Fraaije, M.W.
Deposit date:2020-10-12
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mutational and structural analysis of an ancestral fungal dye-decolorizing peroxidase.
Febs J., 288, 2021
4EMS
DownloadVisualize
BU of 4ems by Molmil
Crystal Structure Analysis of Coniferyl Alcohol 9-O-Methyltransferase from Linum Nodiflorum
Descriptor: Coniferyl alcohol 9-O-methyltransferase, GLYCEROL
Authors:Wolters, S, Heine, A, Petersen, M.
Deposit date:2012-04-12
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7534 Å)
Cite:Structural analysis of coniferyl alcohol 9-O-methyltransferase from Linum nodiflorum reveals a novel active-site environment.
Acta Crystallogr.,Sect.D, 69, 2013
4EXO
DownloadVisualize
BU of 4exo by Molmil
Revised, rerefined crystal structure of PDB entry 2QHK, methyl accepting chemotaxis protein
Descriptor: Methyl-accepting chemotaxis protein, PYRUVIC ACID
Authors:Sweeney, E.G, Henderson, J.N, Goers, J, Wreden, C, Hicks, K.G, Foster, J.K, Parthasarathy, R, Remington, S.J, Guillemin, K.
Deposit date:2012-04-30
Release date:2012-05-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Proposed Mechanism for the pH-Sensing Helicobacter pylori Chemoreceptor TlpB.
Structure, 20, 2012
5J76
DownloadVisualize
BU of 5j76 by Molmil
Structure of Lectin from Colocasia esculenta(L.) Schott
Descriptor: 12kD storage protein, GLYCEROL
Authors:Vajravijayan, S, Pletnev, S, Nandhagopal, N, Gunasekaran, K.
Deposit date:2016-04-06
Release date:2016-06-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of beta-prism lectin from Colocasia esculenta (L.) S chott.
Int.J.Biol.Macromol., 91, 2016
5J1D
DownloadVisualize
BU of 5j1d by Molmil
X-ray crystal structure of Phosphate binding protein (PBP) from Stenotrophomonas maltophilia
Descriptor: GLYCEROL, PHOSPHATE ION, Phosphate binding protein
Authors:Hatti, K, Gulati, A, Narayanswamy, S, Murthy, M.R.N.
Deposit date:2016-03-29
Release date:2016-10-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Determination of crystal structures of proteins of unknown identity using a marathon molecular replacement procedure: structure of Stenotrophomonas maltophilia phosphate-binding protein.
Acta Crystallogr D Struct Biol, 72, 2016
1KTW
DownloadVisualize
BU of 1ktw by Molmil
IOTA-CARRAGEENASE COMPLEXED TO IOTA-CARRAGEENAN FRAGMENTS
Descriptor: 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, 3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose-(1-4)-3,6-anhydro-2-O-sulfo-alpha-D-galactopyranose-(1-3)-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Michel, G, Kahn, R, Dideberg, O.
Deposit date:2002-01-18
Release date:2003-06-10
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structural Bases of the Processive Degradation of iota-Carrageenan, a Main Cell Wall Polysaccharide of Red Algae.
J.Mol.Biol., 334, 2003
7P9C
DownloadVisualize
BU of 7p9c by Molmil
Escherichia coli type II L-asparaginase
Descriptor: L-asparaginase 2
Authors:Maggi, M, Scotti, C.
Deposit date:2021-07-27
Release date:2021-10-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Revealing Escherichia coli type II L-asparaginase active site flexible loop in its open, ligand-free conformation.
Sci Rep, 11, 2021
1O7A
DownloadVisualize
BU of 1o7a by Molmil
Human beta-Hexosaminidase B
Descriptor: 1,2-ETHANEDIOL, 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Maier, T, Strater, N, Schuette, C, Klingenstein, R, Sandhoff, K, Saenger, W.
Deposit date:2002-10-29
Release date:2003-10-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The X-Ray Crystal Structure of Human Beta-Hexosaminidase B Provides New Insights Into Sandhoff Disease
J.Mol.Biol., 328, 2003
6XTK
DownloadVisualize
BU of 6xtk by Molmil
Y114C Transthyretin structure in complex with Tolcalpone
Descriptor: Tolcapone, Transthyretin
Authors:Varejao, N, Reverter, D, Pinheiro, F, Pallares, I, Ventura, S.
Deposit date:2020-01-16
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Tolcapone, a potent aggregation inhibitor for the treatment of familial leptomeningeal amyloidosis.
Febs J., 288, 2021
7Q3V
DownloadVisualize
BU of 7q3v by Molmil
Re-refined structure of a type III antifreeze protein isoform HPLC 12
Descriptor: Type-3 ice-structuring protein HPLC 12
Authors:Mikhailovskii, O, Xue, Y, Jia, Z, Skrynnikov, N.R.
Deposit date:2021-10-28
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Modeling a unit cell: crystallographic refinement procedure using the biomolecular MD simulation platform Amber.
Iucrj, 9, 2022
6ORM
DownloadVisualize
BU of 6orm by Molmil
Crystal Structure of Peruvianin-I (Cysteine peptidase from Thevetia peruviana latex)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peruvianin-I, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cruz, W.T, Bezerra, E.H.S, da Silva, F.M.S, Freire, V.N, Ramos, M.V, Rocha, B.A.M, Freitas, C.D.T.
Deposit date:2019-04-30
Release date:2020-05-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure and specific location of a germin-like protein with proteolytic activity from Thevetia peruviana.
Plant Sci., 298, 2020
1XLT
DownloadVisualize
BU of 1xlt by Molmil
Crystal structure of Transhydrogenase [(domain I)2:domain III] heterotrimer complex
Descriptor: NAD(P) transhydrogenase subunit alpha part 1, NAD(P) transhydrogenase subunit beta, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sundaresan, V, Chartron, J, Yamaguchi, M, Stout, C.D.
Deposit date:2004-09-30
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Conformational Diversity in NAD(H) and Transhydrogenase Nicotinamide Nucleotide Binding Domains
J.Mol.Biol., 346, 2005
5Z5O
DownloadVisualize
BU of 5z5o by Molmil
Structure of Pycnonodysostosis disease related I249T mutant of human cathepsin K
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Biswas, S, Roy, S.
Deposit date:2018-01-19
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Not all pycnodysostosis-related mutants of human cathepsin K are inactive - crystal structure and biochemical studies of an active mutant I249T.
FEBS J., 285, 2018
4EWL
DownloadVisualize
BU of 4ewl by Molmil
Crystal Structure of MshB with glycerol and Acetate bound in the active site
Descriptor: 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ACETATE ION, ...
Authors:Broadley, S.G, Sewell, B.T, Weber, B.W, Marakalala, M.J, Steenkamp, D.J.
Deposit date:2012-04-27
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A new crystal form of MshB from Mycobacterium tuberculosis with glycerol and acetate in the active site suggests the catalytic mechanism.
Acta Crystallogr.,Sect.D, 68, 2012
4E70
DownloadVisualize
BU of 4e70 by Molmil
Crystal Structure Analysis of Coniferyl Alcohol 9-O-Methyltransferase from Linum Nodiflorum in Complex with Coniferyl Alcohol
Descriptor: 4-[(1E)-3-hydroxyprop-1-en-1-yl]-2-methoxyphenol, Coniferyl alcohol 9-O-methyltransferase, GLYCEROL
Authors:Wolters, S, Heine, A, Petersen, M.
Deposit date:2012-03-16
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6093 Å)
Cite:Structural analysis of coniferyl alcohol 9-O-methyltransferase from Linum nodiflorum reveals a novel active-site environment.
Acta Crystallogr.,Sect.D, 69, 2013
7CEQ
DownloadVisualize
BU of 7ceq by Molmil
Crystal structure of cysteine desulfurase SufS H121A from Bacillus subtilis
Descriptor: Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2020-06-24
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
7CER
DownloadVisualize
BU of 7cer by Molmil
Crystal structure of D-cycloserine-bound form of cysteine desulfurase SufS H121A from Bacillus subtilis
Descriptor: Cysteine desulfurase SufS, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2020-06-24
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
7CEP
DownloadVisualize
BU of 7cep by Molmil
Crystal structure of L-cycloserine-bound form of cysteine desulfurase SufS from Bacillus subtilis
Descriptor: (5-hydroxy-6-methyl-4-{[(3-oxo-2,3-dihydro-1,2-oxazol-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, ...
Authors:Nakamura, R, Yasuhiro, T, Fujishiro, T.
Deposit date:2020-06-24
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
4EVI
DownloadVisualize
BU of 4evi by Molmil
Crystal Structure Analysis of Coniferyl Alcohol 9-O-Methyltransferase from Linum Nodiflorum in Complex with Coniferyl Alcohol 9-Methyl Ether and S -Adenosyl-L-Homocysteine
Descriptor: 2-methoxy-4-[(1E)-3-methoxyprop-1-en-1-yl]phenol, 4-[(1E)-3-hydroxyprop-1-en-1-yl]-2-methoxyphenol, Coniferyl alcohol 9-O-methyltransferase, ...
Authors:Wolters, S, Heine, A, Petersen, M.
Deposit date:2012-04-26
Release date:2013-05-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.015 Å)
Cite:Structural analysis of coniferyl alcohol 9-O-methyltransferase from Linum nodiflorum reveals a novel active-site environment.
Acta Crystallogr.,Sect.D, 69, 2013
7CES
DownloadVisualize
BU of 7ces by Molmil
Crystal structure of L-cycloserine-bound form of cysteine desulfurase SufS H121A from Bacillus subtilis
Descriptor: (5-hydroxy-6-methyl-4-{[(3-oxo-2,3-dihydro-1,2-oxazol-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2020-06-24
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
7CEO
DownloadVisualize
BU of 7ceo by Molmil
Crystal structure of PMP-bound form of cysteine desulfurase SufS from Bacillus subtilis
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER
Authors:Nakamura, R, Takahashi, Y, Fujishiro, T.
Deposit date:2020-06-24
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Cycloserine enantiomers inhibit PLP-dependent cysteine desulfurase SufS via distinct mechanisms.
Febs J., 2022
7EOX
DownloadVisualize
BU of 7eox by Molmil
Protease structure from Euphorbia resinifera
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, IODIDE ION, Protease, ...
Authors:Siritapetawee, J, Attarataya, J, Charoenwattanasatien, R.
Deposit date:2021-04-24
Release date:2022-01-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Sequence analysis and crystal structure of a glycosylated protease from Euphorbia resinifera latex for its proteolytic activity aspect.
Biotechnol Appl Biochem, 69, 2022
1Q9H
DownloadVisualize
BU of 1q9h by Molmil
3-Dimensional structure of native Cel7A from Talaromyces emersonii
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, cellobiohydrolase I catalytic domain
Authors:Grassick, A, Thompson, R, Murray, P.G, Collins, C.M, Byrnes, L, Tuohy, M.G, Birrane, G, Higgins, T.M.
Deposit date:2003-08-25
Release date:2004-11-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Three-dimensional structure of a thermostable native cellobiohydrolase, CBH IB, and molecular characterization of the cel7 gene from the filamentous fungus, Talaromyces emersonii
Eur.J.Biochem., 271, 2004

238268

数据于2025-07-02公开中

PDB statisticsPDBj update infoContact PDBjnumon