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8D04	Hallucinated C2 protein assembly HALC2_062 Descriptor: HALC2_062 Authors: Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D. Deposit date: 2022-05-25 Release date: 2022-09-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.11 Å) Cite: Hallucinating symmetric protein assemblies. Science, 378, 2022
8D07	Hallucinated C3 protein assembly HALC3_109 Descriptor: HALC3_109 Authors: Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D. Deposit date: 2022-05-25 Release date: 2022-09-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Hallucinating symmetric protein assemblies. Science, 378, 2022
8D05	Hallucinated C2 protein assembly HALC2_065 Descriptor: HALC2_065 Authors: Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D. Deposit date: 2022-05-25 Release date: 2022-09-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.51 Å) Cite: Hallucinating symmetric protein assemblies. Science, 378, 2022
8D08	Hallucinated C4 protein assembly HALC4_135 Descriptor: HALC4_135 Authors: Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D. Deposit date: 2022-05-25 Release date: 2022-09-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Hallucinating symmetric protein assemblies. Science, 378, 2022
8D09	Hallucinated C4 protein assembly HALC4_136 Descriptor: HALC4_136 Authors: Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D. Deposit date: 2022-05-25 Release date: 2022-09-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Hallucinating symmetric protein assemblies. Science, 378, 2022
8D06	Hallucinated C3 protein assembly HALC3_104 Descriptor: HALC3_104 Authors: Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D. Deposit date: 2022-05-25 Release date: 2022-09-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Hallucinating symmetric protein assemblies. Science, 378, 2022
8D03	Hallucinated C2 protein assembly HALC2_068 Descriptor: HALC2_068 Authors: Ragotte, R.J, Bera, A.K, Wicky, B.I.M, Milles, L.F, Baker, D. Deposit date: 2022-05-25 Release date: 2022-09-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Hallucinating symmetric protein assemblies. Science, 378, 2022
8CWY	Accurate computational design of genetically encoded 3D protein crystals Descriptor: T32-15-1, T32-15-2 Authors: Li, Z, Borst, A.J, Baker, D. Deposit date: 2022-05-19 Release date: 2023-11-01 Last modified: 2023-12-20 Method: ELECTRON MICROSCOPY (3.34 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
8CUS	Accurate computational design of genetically encoded 3D protein crystals Descriptor: I432-1(NaCl) Chain A, I432-1(NaCl) Chain B Authors: Bera, A.K, Li, Z, Baker, D. Deposit date: 2022-05-17 Release date: 2023-11-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.98 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
8CUT	Accurate computational design of genetically encoded 3D protein crystals Descriptor: I432-1(Imd) Chain A, I432-1(Imd) Chain B Authors: Bera, A.K, Li, Z, Baker, D. Deposit date: 2022-05-17 Release date: 2023-11-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (4 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
8CUW	Accurate computational design of genetically encoded 3D protein crystals Descriptor: F4132-1-3 Chain A, F4132-1-3 Chain B Authors: Bera, A.K, Li, Z, Baker, D. Deposit date: 2022-05-17 Release date: 2023-11-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.55 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
8CUX	Accurate computational design of genetically encoded 3D protein crystals Descriptor: R3-1 Chain B Authors: Bera, A.K, Natterman, U, Baker, D. Deposit date: 2022-05-17 Release date: 2023-11-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
8CWZ	Accurate computational design of genetically encoded 3D protein crystals Descriptor: I432-1-X3 Chain A, I432-1-X3 Chain B Authors: Bera, A.K, Li, Z, Baker, D. Deposit date: 2022-05-19 Release date: 2023-11-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (5.53 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
8CWS	Accurate computational design of genetically encoded 3D protein crystals Descriptor: F4132-2 Chain A, F4132-2 Chain B Authors: Bera, A.K, Li, Z, Baker, D. Deposit date: 2022-05-19 Release date: 2023-11-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (4.4 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
8CUU	Accurate computational design of genetically encoded 3D protein crystals Descriptor: F4132-1-0 chain A, F4132-1-0 chain B Authors: Bera, A.K, Li, Z, Baker, D. Deposit date: 2022-05-17 Release date: 2023-11-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.91 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
8CUV	Accurate computational design of genetically encoded 3D protein crystals Descriptor: F4132-1 chain A, F4132-1 chain B Authors: Bera, A.K, Li, Z, Baker, D. Deposit date: 2022-05-17 Release date: 2023-11-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Accurate computational design of three-dimensional protein crystals. Nat Mater, 22, 2023
3GDM	Crystal structure of the K93R mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae Descriptor: Orotidine 5'-phosphate decarboxylase Authors: Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. Deposit date: 2009-02-24 Release date: 2010-02-09 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of the K93R mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae. To be Published
3GDT	Crystal structure of the D91N mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae complexed with 6-azauridine 5'-monophosphate Descriptor: 6-AZA URIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase Authors: Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. Deposit date: 2009-02-24 Release date: 2009-06-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization. Biochemistry, 48, 2009
4J8Y	E3_5 DARPin D77S mutant Descriptor: DARPin_E3_5_D77S Authors: Seeger, M.A, Gruetter, M.G. Deposit date: 2013-02-15 Release date: 2013-08-14 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Design, construction, and characterization of a second-generation DARPin library with reduced hydrophobicity. Protein Sci., 22, 2013
4JMH	Crystal structure of synthetic protein in complex with double pY peptide Descriptor: Clamp Shc1_pY239/240, SHC-transforming protein 1 Authors: Yasui, N, Smith, L, Koide, S. Deposit date: 2013-03-14 Release date: 2014-04-23 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.408 Å) Cite: Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation. Mol.Cell, 54, 2014
3HEV	Cyclic residues in alpha/beta-peptide helix bundles: GCN4-pLI side chain sequence on an (alpha-alpha-beta) backbone with a cyclic beta-residue at position 19 Descriptor: alpha/beta-peptide based on the GCN4-pLI side chain sequence with an (alpha-alpha-beta) backbone and a cyclic beta-residue at position 19 Authors: Horne, W.S, Price, J.L, Gellman, S.H. Deposit date: 2009-05-10 Release date: 2010-04-21 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural consequences of beta-amino acid preorganization in a self-assembling alpha/beta-peptide: fundamental studies of foldameric helix bundles. J.Am.Chem.Soc., 132, 2010
3HET	Cyclic residues in alpha/beta-peptide helix bundles: GCN4-pLI side chain sequence on an (alpha-alpha-beta) backbone with a cyclic beta-residue at position 10 Descriptor: alpha/beta-peptide based on the GCN4-pLI side chain sequence with an (alpha-alpha-beta) backbone and a cyclic beta-residue at position 10 Authors: Horne, W.S, Price, J.L, Gellman, S.H. Deposit date: 2009-05-10 Release date: 2010-04-21 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural consequences of beta-amino acid preorganization in a self-assembling alpha/beta-peptide: fundamental studies of foldameric helix bundles. J.Am.Chem.Soc., 132, 2010
3HEX	Cyclic residues in alpha/beta-peptide helix bundles: GCN4-pLI side chain sequence on an (alpha-alpha-beta) backbone with cyclic beta-residues at positions 1, 4, 19 and 28 Descriptor: alpha/beta-peptide based on the GCN4-pLI side chain sequence with an (alpha-alpha-beta) backbone and cyclic beta-residues at positions 1, 4, 19 and 28 Authors: Horne, W.S, Price, J.L, Gellman, S.H. Deposit date: 2009-05-10 Release date: 2010-04-21 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural consequences of beta-amino acid preorganization in a self-assembling alpha/beta-peptide: fundamental studies of foldameric helix bundles. J.Am.Chem.Soc., 132, 2010
4LNY	Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR422 Descriptor: CADMIUM ION, CHLORIDE ION, Engineered Protein OR422 Authors: Vorobiev, S, Su, M, Bjelic, S, Kipnis, Y, Wang, L, Sahdev, S, Xiao, R, Maglaqui, M, Kogan, S, Baker, D, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG) Deposit date: 2013-07-12 Release date: 2013-08-07 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.929 Å) Cite: Crystal Structure of Engineered Protein OR422. To be Published
8F54	Top-down design of protein architectures with reinforcement learning Descriptor: RC_I_1 Authors: Borst, A.J, Baker, D. Deposit date: 2022-11-11 Release date: 2023-05-10 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Top-down design of protein architectures with reinforcement learning. Science, 380, 2023

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